BLASTX nr result

ID: Dioscorea21_contig00010468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010468
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35896.1| unknown [Lotus japonicus]                               97   1e-18
ref|XP_002891772.1| zinc finger family protein [Arabidopsis lyra...    96   3e-18
ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Rici...    96   3e-18
ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like ...    95   5e-18
gb|AAG43550.1|AF211532_1 Avr9/Cf-9 rapidly elicited protein 132 ...    95   5e-18

>gb|AFK35896.1| unknown [Lotus japonicus]
          Length = 286

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 40/68 (58%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = -3

Query: 279 GLDPEALKSIPVVA--QSELETSAECAVCLSEIADGDKARVLPTCRHVFHVDCVDVWFST 106
           GLDP  L+S+PVV     + +   ECAVCLSE+ +G+KAR+LP C H FHVDC+D+WF +
Sbjct: 74  GLDPSVLRSLPVVVFQSQDFKDGLECAVCLSELDEGEKARLLPKCNHGFHVDCIDMWFQS 133

Query: 105 HATCPLCR 82
           H+TCPLCR
Sbjct: 134 HSTCPLCR 141


>ref|XP_002891772.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337614|gb|EFH68031.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 320

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 41/68 (60%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = -3

Query: 279 GLDPEALKSIPVVA--QSELETSAECAVCLSEIADGDKARVLPTCRHVFHVDCVDVWFST 106
           GLD + L+SI V+    ++ +   ECAVCLSE+ DGDKARVLP C H FHVDC+D+WF +
Sbjct: 90  GLDSKILQSIHVIVFKSTDFKDGLECAVCLSELVDGDKARVLPRCNHGFHVDCIDMWFQS 149

Query: 105 HATCPLCR 82
           H+TCPLCR
Sbjct: 150 HSTCPLCR 157


>ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Ricinus communis]
           gi|223526251|gb|EEF28567.1| RING-H2 finger protein
           ATL1M, putative [Ricinus communis]
          Length = 281

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
 Frame = -3

Query: 279 GLDPEALKSIPVVA-QSE-LETSAECAVCLSEIADGDKARVLPTCRHVFHVDCVDVWFST 106
           GLD   L+S+PVV  QSE  +   ECAVCLSEIA G+KAR+LP C H FHVDC+D+WF +
Sbjct: 73  GLDMSVLRSLPVVIFQSEDFKDGLECAVCLSEIAQGEKARLLPKCNHGFHVDCIDMWFQS 132

Query: 105 HATCPLCR 82
           H+TCPLCR
Sbjct: 133 HSTCPLCR 140


>ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 314

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 40/68 (58%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
 Frame = -3

Query: 279 GLDPEALKSIPVVA--QSELETSAECAVCLSEIADGDKARVLPTCRHVFHVDCVDVWFST 106
           GLDP  LKS+PV+     + +   ECAVCLSEI  G+K R+LP C H FHVDC+D+WF +
Sbjct: 84  GLDPSVLKSLPVLVFQPEDFKEGLECAVCLSEIVQGEKLRLLPKCNHGFHVDCIDMWFHS 143

Query: 105 HATCPLCR 82
           H+TCPLCR
Sbjct: 144 HSTCPLCR 151


>gb|AAG43550.1|AF211532_1 Avr9/Cf-9 rapidly elicited protein 132 [Nicotiana tabacum]
          Length = 256

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
 Frame = -3

Query: 279 GLDPEALKSIPVVA--QSELETSAECAVCLSEIADGDKARVLPTCRHVFHVDCVDVWFST 106
           GLDP  LK+IPVV     + +   EC+VCLSE+++G+  RVLP C H FHVDC+D+WF +
Sbjct: 81  GLDPSVLKTIPVVPFNMKDFKDGLECSVCLSEVSEGENTRVLPKCNHGFHVDCIDMWFHS 140

Query: 105 HATCPLCR 82
           H+TCPLCR
Sbjct: 141 HSTCPLCR 148


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