BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010466
         (2920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus commun...   582   e-163
emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]   582   e-163
ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer...   580   e-163
ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|2...   563   e-158
ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana] gi|...   501   e-139

>ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 492

 Score =  582 bits (1501), Expect = e-163
 Identities = 279/483 (57%), Positives = 376/483 (77%), Gaps = 3/483 (0%)
 Frame = +2

Query: 266  IDEQRTHELIQFMVSEGLVPTPEEDMKRRDAMEQLKQIVLAWIKLVACQHGLPKEVINST 445
            ++E+R+  L++FM +EGLVP+P E+ KR++ +  LKQIV+AW K VA Q  LP+  I ST
Sbjct: 1    MEEERSLSLLKFMANEGLVPSPREEEKRKNVILNLKQIVVAWAKKVAWQRRLPRLQIAST 60

Query: 446  SATILPFGSYGLGVHGSDSDIDALCIGPSFATLEEDFFVVLKNMIQSRPEVSEVHCVKSA 625
            +ATIL +GSYGLGV+G +SDIDA+C+GP FATL EDFF+VL+NM+++RPEVS +HCVK A
Sbjct: 61   NATILTYGSYGLGVYGPESDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHCVKDA 120

Query: 626  KVPLMRFKFSGINIDFPYTQLQAISVPEFVDIFDPYLVVS-NETSWRSLSGVRANIRILQ 802
            KVPLMRFKF GI+ID PY QL+ ++VP+ VD+ +P+ +++ +ETSW+SLSGVRAN RILQ
Sbjct: 121  KVPLMRFKFDGISIDLPYAQLKVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQ 180

Query: 803  LVPNLKNFQSMLRCIKLWARRRGVYSHLLGFFGGIHLAILAAHVCQRYPNASISALIAIF 982
             VPNL+NFQSMLRCIKLWARRRGV  +L GF GG+HLAIL+A VCQ+YPNAS+SALI+ F
Sbjct: 181  FVPNLENFQSMLRCIKLWARRRGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNF 240

Query: 983  FEYFWLWRWPEPVILQ-GSSIPFR-YPDGRALMPILMPCSPFEWCNSNITKSTFTKIKAE 1156
            F  +  W WP PV+LQ G S P   + + R+ MPI +PCSP E+C+SNITKST+ +I+ E
Sbjct: 241  FATYATWPWPTPVMLQDGMSSPAEDFIETRSFMPIRLPCSPHEYCHSNITKSTYYRIRTE 300

Query: 1157 FQRGHFLTRDLARPDFDWTFLFKPFPYVEKYSHFLRILLTAHDGDELRDWVGWVKSRFRS 1336
            F RGH LT+DL +PDFDW  +F+PFPY +KY+ F++I L+A D DE+ DWVGWVKSRFR+
Sbjct: 301  FLRGHSLTKDLLKPDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEVGDWVGWVKSRFRA 360

Query: 1337 LLLKLEAVQGYCDPNPTEYMDHNVAEPNVVFYWGLSPNGCFSTSVDAIKEDFMKSVNKDD 1516
            LLLKLE +QG CDP+P EY D +V+EPNVVFYWGL+P+      +++++EDF++++    
Sbjct: 361  LLLKLEGLQGQCDPSPVEYADRDVSEPNVVFYWGLNPSRSNYIDLESVEEDFLRNI---- 416

Query: 1517 TYSAYQGSTCKLDMLIVESSQLPKYIHLDKGSTKELKACWKILDYSNHMKPIYSQYTPQY 1696
             YS Y G+  KL++ IV++++LPK    + G+ K++KA WK++D      P YSQ+ P Y
Sbjct: 417  -YSGYHGTRRKLELSIVKAAELPKNAQFNSGNGKKMKAYWKVVD-KEQRTPAYSQHLPGY 474

Query: 1697 SGG 1705
              G
Sbjct: 475  FVG 477


>emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
          Length = 604

 Score =  582 bits (1501), Expect = e-163
 Identities = 274/490 (55%), Positives = 372/490 (75%), Gaps = 2/490 (0%)
 Frame = +2

Query: 242  LNPASLLRIDEQRTHELIQFMVSEGLVPTPEEDMKRRDAMEQLKQIVLAWIKLVACQHGL 421
            LNPA L+R++ +R+  L+QFM +EGL+P+PEE++KR++ +E+LK+IVL W+K VA Q   
Sbjct: 104  LNPAVLVRMEHRRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQR 163

Query: 422  PKEVINSTSATILPFGSYGLGVHGSDSDIDALCIGPSFATLEEDFFVVLKNMIQSRPEVS 601
            PK+ I  TSATIL +GSYGLGVHG +SDIDALC+GP FA++ +DFF+VL+NM++SRPEVS
Sbjct: 164  PKQQIAVTSATILTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVS 223

Query: 602  EVHCVKSAKVPLMRFKFSGINIDFPYTQLQAISVPEFVDIFDPYLVVS-NETSWRSLSGV 778
            E+HCVK AKVPLMRFKF GI++D PY QL+ + VPE +++ +PY + + +ETSW+SLSGV
Sbjct: 224  EIHCVKDAKVPLMRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGV 283

Query: 779  RANIRILQLVPNLKNFQSMLRCIKLWARRRGVYSHLLGFFGGIHLAILAAHVCQRYPNAS 958
            RAN  ILQLVPN++NFQS+LRCIKLWA+RRGVY +L G+FGG+HLAILAA VCQ+ P+A+
Sbjct: 284  RANECILQLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHAN 343

Query: 959  ISALIAIFFEYFWLWRWPEPVILQGSSIPF-RYPDGRALMPILMPCSPFEWCNSNITKST 1135
            ++ L++ FF+ F  W WP PV L+   +P     + RALMPI +PCSP+ +C+SNITKST
Sbjct: 344  LNVLMSSFFKTFSGWPWPTPVALEDGRLPTGGTRETRALMPIQLPCSPYGYCHSNITKST 403

Query: 1136 FTKIKAEFQRGHFLTRDLARPDFDWTFLFKPFPYVEKYSHFLRILLTAHDGDELRDWVGW 1315
            F +I  E   GH LTRDL R DFDW  +F+PF Y +KYS F++I L++ + DEL DWVGW
Sbjct: 404  FYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGW 463

Query: 1316 VKSRFRSLLLKLEAVQGYCDPNPTEYMDHNVAEPNVVFYWGLSPNGCFSTSVDAIKEDFM 1495
            VKSRFR LL K+E VQG CDPNPTE++D +  EPNVVF+WG+ P     + +D +++DFM
Sbjct: 464  VKSRFRFLLAKVEEVQGLCDPNPTEFIDPDAGEPNVVFFWGVQPGRINFSDIDVVEDDFM 523

Query: 1496 KSVNKDDTYSAYQGSTCKLDMLIVESSQLPKYIHLDKGSTKELKACWKILDYSNHMKPIY 1675
            +++N       YQG   K+++ ++ +SQLP Y  LD GS    KACW++ +Y     P++
Sbjct: 524  QNINN----GGYQGPPGKMNLSVIPTSQLPGYAXLDTGSRNRTKACWRMFNYHQPRVPVF 579

Query: 1676 SQYTPQYSGG 1705
            SQ+ P Y  G
Sbjct: 580  SQHLPLYFVG 589


>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
            gi|296083219|emb|CBI22855.3| unnamed protein product
            [Vitis vinifera]
          Length = 563

 Score =  580 bits (1495), Expect = e-163
 Identities = 273/490 (55%), Positives = 371/490 (75%), Gaps = 2/490 (0%)
 Frame = +2

Query: 242  LNPASLLRIDEQRTHELIQFMVSEGLVPTPEEDMKRRDAMEQLKQIVLAWIKLVACQHGL 421
            LNPA L+R++ +R+  L+QFM +EGL+P+PEE++KR++ +E+LK+IVL W+K VA Q   
Sbjct: 63   LNPAVLVRMEHRRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQR 122

Query: 422  PKEVINSTSATILPFGSYGLGVHGSDSDIDALCIGPSFATLEEDFFVVLKNMIQSRPEVS 601
            PK+ I  TSATIL +GSYGLGVHG +SDIDALC+GP FA++ +DFF+VL+NM++SRPEVS
Sbjct: 123  PKQQIAVTSATILTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVS 182

Query: 602  EVHCVKSAKVPLMRFKFSGINIDFPYTQLQAISVPEFVDIFDPYLVVS-NETSWRSLSGV 778
            E+HCVK AKVPLMRFKF GI++D PY QL+ + VPE +++ +PY + + +ETSW+SLSGV
Sbjct: 183  EIHCVKDAKVPLMRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGV 242

Query: 779  RANIRILQLVPNLKNFQSMLRCIKLWARRRGVYSHLLGFFGGIHLAILAAHVCQRYPNAS 958
            RAN  ILQLVPN++NFQS+LRCIKLWA+RRGVY +L G+FGG+HLAILAA VCQ+ P+A+
Sbjct: 243  RANECILQLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHAN 302

Query: 959  ISALIAIFFEYFWLWRWPEPVILQGSSIPF-RYPDGRALMPILMPCSPFEWCNSNITKST 1135
            ++ L++ FF+ F  W WP PV L+   +P     + RALMPI +PCSP+ +C+SNITKST
Sbjct: 303  LNVLMSSFFKTFSGWPWPTPVALEDGRLPTGGTRETRALMPIQLPCSPYGYCHSNITKST 362

Query: 1136 FTKIKAEFQRGHFLTRDLARPDFDWTFLFKPFPYVEKYSHFLRILLTAHDGDELRDWVGW 1315
            F +I  E   GH LTRDL R DFDW  +F+PF Y +KYS F++I L++ + DEL DWVGW
Sbjct: 363  FYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGW 422

Query: 1316 VKSRFRSLLLKLEAVQGYCDPNPTEYMDHNVAEPNVVFYWGLSPNGCFSTSVDAIKEDFM 1495
            VKSRFR LL K+E VQG CDPNPTE++D +   PNVVF+WG+ P     + +D +++DFM
Sbjct: 423  VKSRFRFLLAKVEEVQGLCDPNPTEFIDPDAGGPNVVFFWGVQPGRINFSDIDVVEDDFM 482

Query: 1496 KSVNKDDTYSAYQGSTCKLDMLIVESSQLPKYIHLDKGSTKELKACWKILDYSNHMKPIY 1675
            +++N       YQG   K+++ ++ +SQLP Y  LD GS    KACW++ +Y     P++
Sbjct: 483  QNINN----GGYQGPPGKMNLSVIPTSQLPGYAQLDTGSRNRTKACWRMFNYHQPRVPVF 538

Query: 1676 SQYTPQYSGG 1705
            SQ+ P Y  G
Sbjct: 539  SQHLPLYFVG 548


>ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|222851196|gb|EEE88743.1|
            predicted protein [Populus trichocarpa]
          Length = 483

 Score =  563 bits (1451), Expect = e-158
 Identities = 277/473 (58%), Positives = 355/473 (75%), Gaps = 5/473 (1%)
 Frame = +2

Query: 302  MVSEGLVPTPEEDMKRRDAMEQLKQIVLAWIKLVACQHGLPKEVINSTSATILPFGSYGL 481
            MV+EGL P+PEED KR+  +E+LK IV+AW K VA Q  LPK+ I +TSATIL +GSYGL
Sbjct: 1    MVNEGLFPSPEEDEKRKIIVEKLKTIVVAWAKKVAWQRCLPKQQIAATSATILTYGSYGL 60

Query: 482  GVHGSDSDIDALCIGPSFATLEEDFFVVLKNMIQSRPEVSEVHCVKSAKVPLMRFKFSGI 661
            G H  +SDIDALC+GP FAT+ EDFF+VL N+++SRPE+SE+HCVK +KVPLMRF F GI
Sbjct: 61   GFHDPESDIDALCVGPFFATIAEDFFIVLHNILKSRPEISEIHCVKDSKVPLMRFTFDGI 120

Query: 662  NIDFPYTQLQAISVPEFVDIFDPYLVVS-NETSWRSLSGVRANIRILQLVPNLKNFQSML 838
            ++D PY QL+ ++VPE VDI +  L+ + +ETSW+SLSGVRAN RIL LVPNL NFQSML
Sbjct: 121  SVDLPYAQLKVLNVPENVDILNLSLLTNIDETSWKSLSGVRANQRILLLVPNLMNFQSML 180

Query: 839  RCIKLWARRRGVYSHLLGFFGGIHLAILAAHVCQRYPNASISALIAIFFEYFWLWRWPEP 1018
            RC+KLWA+RRGVY +L GF GG+HLA+LAA VCQ  PNAS+ ALI+ FF  + +W WP P
Sbjct: 181  RCLKLWAKRRGVYGNLNGFLGGVHLAVLAAFVCQNQPNASVIALISNFFSTYAMWPWPTP 240

Query: 1019 VILQG--SSIPFRYPDGRALMPILMPCSPFEWCNSNITKSTFTKIKAEFQRGHFLTRDL- 1189
            V+LQ   SS      + R  MPI +PCSP+E+C+SN+TKSTFTKI+AEF RGH +TRDL 
Sbjct: 241  VMLQDGMSSNVEDVIETRFYMPIRLPCSPYEYCHSNVTKSTFTKIRAEFLRGHSMTRDLL 300

Query: 1190 -ARPDFDWTFLFKPFPYVEKYSHFLRILLTAHDGDELRDWVGWVKSRFRSLLLKLEAVQG 1366
              + D D   +F+PFPY   Y+ F++I L+A D DEL DWVGWVKS FR LLLKLEAVQG
Sbjct: 301  KLKLDSDVGRIFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGWVKSHFRCLLLKLEAVQG 360

Query: 1367 YCDPNPTEYMDHNVAEPNVVFYWGLSPNGCFSTSVDAIKEDFMKSVNKDDTYSAYQGSTC 1546
            +CDPNP EY+D + +EPNVVFYWGL+ + C    ++ ++EDF +S+     Y  Y G   
Sbjct: 361  FCDPNPMEYVDMDASEPNVVFYWGLNRSRCNFVYIEPVEEDFSRSI-----YCGYYGIRG 415

Query: 1547 KLDMLIVESSQLPKYIHLDKGSTKELKACWKILDYSNHMKPIYSQYTPQYSGG 1705
            K+++ IV++S+LPK    D G+ K++KACWK+LDY+    P YSQ+ P Y  G
Sbjct: 416  KMELSIVQASELPKNARFDSGNGKKMKACWKMLDYNQRRTPAYSQHLPSYFVG 468


>ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
            gi|62320636|dbj|BAD95301.1| poly(A) polymerase
            [Arabidopsis thaliana] gi|332640894|gb|AEE74415.1|
            poly(A) polymerase 3 [Arabidopsis thaliana]
          Length = 507

 Score =  501 bits (1290), Expect = e-139
 Identities = 249/484 (51%), Positives = 348/484 (71%), Gaps = 5/484 (1%)
 Frame = +2

Query: 269  DEQRTHELIQFMVSEGLVPTPEEDMKRRDAMEQLKQIVLAWIKLVACQHGLPKEVINSTS 448
            D++ +  L Q MV+EGL+P+ E+++KRR  + QL++IV+ W+K VA QH LP+  I++T+
Sbjct: 14   DDESSISLRQLMVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATN 73

Query: 449  ATILPFGSYGLGVHGSDSDIDALCIGPSFATLEEDFFVVLKNMIQSRPEVSEVHCVKSAK 628
            ATILP+GSYGLGV+GS+SDIDALCIGP FA++ EDFF+ L++M++SR EVSE+HCVK AK
Sbjct: 74   ATILPYGSYGLGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAK 133

Query: 629  VPLMRFKFSGINIDFPYTQLQAISVPEFVDIFDPYLVVS-NETSWRSLSGVRANIRILQL 805
            VPL+RFKF GI +D PY QL+ +S+P  VD+ +P+ +   +ETSW+ LSGVRAN  ILQL
Sbjct: 134  VPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQL 193

Query: 806  VPNLKNFQSMLRCIKLWARRRGVYSHLLGFFGGIHLAILAAHVCQRYPNASISALIAIFF 985
            VP+L+ FQS+LRC+KLWA+RRGVY +L GF GG+H+AILAA VC   PNA++S+L+A FF
Sbjct: 194  VPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFF 253

Query: 986  EYFWLWRWPEPVILQGSSIPFR-YPDGRALMPILMPCSPFEWCNSNITKSTFTKIKAEFQ 1162
              F  W+WP PV+L   + P    P G  LMPI +PC   ++CNS IT+STF KI AEF 
Sbjct: 254  YTFAHWQWPTPVVLLEDTYPSTGAPPG--LMPIQLPCGSHQYCNSTITRSTFYKIVAEFL 311

Query: 1163 RGHFLTRDLARPDFDWTFLFKPFPYVEKYSHFLRILLTAHDGDELRDWVGWVKSRFRSLL 1342
             GH LT+D  + +F W  LF+ +PY   Y+ F +I L+A + ++L DWVGWVKSRFR LL
Sbjct: 312  LGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLL 371

Query: 1343 LKLEAVQGYCDPNPTEYMDHNVAEPNVVFYWGLSPNGCFSTSVDAIKEDFMKSVNKDDTY 1522
            +K+E V G CDPNPTEY++    +PN+VFYWGL       + ++++K DF+K+VN     
Sbjct: 372  IKIEEVYGICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIESVKIDFLKNVNS---- 427

Query: 1523 SAYQGSTCKLDMLIVESSQLPK--YIHLDKGSTKELKACWKIL-DYSNHMKPIYSQYTPQ 1693
             +++G+  ++ + +V++SQLPK      +  S K  K CW+I  D   +  P+YS++ P 
Sbjct: 428  GSFRGTVGRIQLTLVKASQLPKNGECGSNNRSKKVTKTCWRIREDKQCNNVPVYSKHLPG 487

Query: 1694 YSGG 1705
            Y  G
Sbjct: 488  YVVG 491