BLASTX nr result
ID: Dioscorea21_contig00010457
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00010457
(1647 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group] g... 613 e-173
emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group] 612 e-172
ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containi... 608 e-171
ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|1... 595 e-168
ref|XP_002527905.1| pentatricopeptide repeat-containing protein,... 595 e-167
>ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa
Japonica Group] gi|38344779|emb|CAE01505.2|
OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa
Japonica Group] gi|125543501|gb|EAY89640.1| hypothetical
protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein
OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 524
Score = 613 bits (1582), Expect = e-173
Identities = 313/523 (59%), Positives = 375/523 (71%), Gaps = 38/523 (7%)
Frame = +1
Query: 40 MATKTKLVAKRSSK-YLEEALYKRLFRGGSSPKSVSNELTDFVKSRKLVYKWEVGVTLRK 216
MAT+ K VA+RSSK Y++EALY+RLFR GS+P++V E+ F+ SRK +KWEVGV +R+
Sbjct: 1 MATRVKDVARRSSKKYVDEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRR 60
Query: 217 LRSRKRFRPALKLSETMAKRGMNLTVSDHAIHLDLVAKARGITSAEEYFINLPEPAKNNL 396
LR + +RPALKLSE MA+RGMN TVSD AI LDLVAK+RGI +AE+YF++LPE +K +L
Sbjct: 61 LRKQALYRPALKLSEVMARRGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHL 120
Query: 397 AYGALLNCYCKELMTXXXXXXXXXXXXXRFASSPMVYNSLMTLYTKTNRHDKIPSIIQEM 576
YGALLNCYCK+LMT FA + M YNSLMTLYTK N+H+K+PS+IQ+M
Sbjct: 121 TYGALLNCYCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDM 180
Query: 577 KADDVMPDCFTYNVWMRALAAMKDISGVERVIEEMKRDGRVTADWTTYSNLASIYVDAGM 756
KADDV+PD +TYNVWMRALAA DI GVERVIEEMKRDGRVT DWTTYSNLASIYVDAG+
Sbjct: 181 KADDVLPDIYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGL 240
Query: 757 FQKAEGALKELEKRNVGRDLSAYQFLITLYGRTGNLVEVYRIWRSLKLAHPRMANISYLN 936
F+KAE ALKELEK N DL AYQFLITLY RT NLVEV+R+WRSLK PR AN+SYLN
Sbjct: 241 FEKAEAALKELEKWNTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLN 300
Query: 937 MIQVLVNLKDLPGAEICFKEWES------------------------------------- 1005
MIQ L NLKDLPGAE CFKEWE+
Sbjct: 301 MIQALANLKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGEL 360
Query: 1006 KCSTYDIRVVNVLLRAYTKEDMFEXXXXXXXXXXXXXXRLNAKTWEILLEYHLNKGDMKS 1185
K YDIRV N +++AY E MF+ RLNAKTWEI +E++L +GD+K
Sbjct: 361 KHPKYDIRVANAMIKAYITEGMFDKAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKM 420
Query: 1186 VIYCADRGMKKGKTYNRIWVPPPNVVKSIMQYFEEKKDVNGAEKFIEVLKSVQSELSTEV 1365
V +CADR +KKG + RIWVPP V +++M YFE+ KDV+GAEKF+EVLK VQ +L T V
Sbjct: 421 VHWCADRAIKKGHSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVV 480
Query: 1366 LEALIRTYTIAGKKSPGMRLRLKMENATVSEATEKLLDQICVE 1494
E L+RTY AGKK PGMR RLK+EN VSE T KLLD +C++
Sbjct: 481 FEPLVRTYAAAGKKLPGMRHRLKIENVEVSEETAKLLDSVCID 523
>emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 612 bits (1577), Expect = e-172
Identities = 312/523 (59%), Positives = 374/523 (71%), Gaps = 38/523 (7%)
Frame = +1
Query: 40 MATKTKLVAKRSSK-YLEEALYKRLFRGGSSPKSVSNELTDFVKSRKLVYKWEVGVTLRK 216
MAT+ K VA+RSSK Y++EALY+RLFR GS+P++V E+ F+ SRK +KWEVGV +R+
Sbjct: 1 MATRVKDVARRSSKKYVDEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRR 60
Query: 217 LRSRKRFRPALKLSETMAKRGMNLTVSDHAIHLDLVAKARGITSAEEYFINLPEPAKNNL 396
LR + +RPALKLSE MA+RGMN TVSD AI LDLVAK+RGI +AE+YF++LPE +K +L
Sbjct: 61 LRKQALYRPALKLSEVMARRGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHL 120
Query: 397 AYGALLNCYCKELMTXXXXXXXXXXXXXRFASSPMVYNSLMTLYTKTNRHDKIPSIIQEM 576
YGALLNCYCK+LMT FA + M YNSLMTLYTK N+H+K+PS+IQ+M
Sbjct: 121 TYGALLNCYCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDM 180
Query: 577 KADDVMPDCFTYNVWMRALAAMKDISGVERVIEEMKRDGRVTADWTTYSNLASIYVDAGM 756
KADDV+PD +TYNVWMRALAA DI GVERVIEEMKRDGRVT DWTTYSNLASIYVDAG+
Sbjct: 181 KADDVLPDIYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGL 240
Query: 757 FQKAEGALKELEKRNVGRDLSAYQFLITLYGRTGNLVEVYRIWRSLKLAHPRMANISYLN 936
F+KAE ALKELEK N DL AYQFLITLY RT NLVEV+R+WRSLK PR AN+SYLN
Sbjct: 241 FEKAEAALKELEKWNTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLN 300
Query: 937 MIQVLVNLKDLPGAEICFKEWES------------------------------------- 1005
MIQ L NLKDLPGAE CFKEWE+
Sbjct: 301 MIQALANLKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGEL 360
Query: 1006 KCSTYDIRVVNVLLRAYTKEDMFEXXXXXXXXXXXXXXRLNAKTWEILLEYHLNKGDMKS 1185
K YDIRV N +++ Y E MF+ RLNAKTWEI +E++L +GD+K
Sbjct: 361 KHPKYDIRVANAMIKEYITEGMFDQAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKM 420
Query: 1186 VIYCADRGMKKGKTYNRIWVPPPNVVKSIMQYFEEKKDVNGAEKFIEVLKSVQSELSTEV 1365
V +CADR +KKG + RIWVPP V +++M YFE+ KDV+GAEKF+EVLK VQ +L T V
Sbjct: 421 VHWCADRAIKKGHSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVV 480
Query: 1366 LEALIRTYTIAGKKSPGMRLRLKMENATVSEATEKLLDQICVE 1494
E L+RTY AGKK PGMR RLK+EN VSE T KLLD +C++
Sbjct: 481 FEPLVRTYAAAGKKLPGMRHRLKIENVEVSEETAKLLDSVCID 523
>ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 608 bits (1567), Expect = e-171
Identities = 300/483 (62%), Positives = 366/483 (75%)
Frame = +1
Query: 46 TKTKLVAKRSSKYLEEALYKRLFRGGSSPKSVSNELTDFVKSRKLVYKWEVGVTLRKLRS 225
++TK +AKRS KYLEEALY RLF+ GSS SV +L F+KS K V+KWEVG T++KLR
Sbjct: 7 SRTKNIAKRSKKYLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRD 66
Query: 226 RKRFRPALKLSETMAKRGMNLTVSDHAIHLDLVAKARGITSAEEYFINLPEPAKNNLAYG 405
RKRF PALKLSETMAKRGMN+T+SD AI+LDL+ K RG+ +AE YFI+LPE +KN+L YG
Sbjct: 67 RKRFYPALKLSETMAKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYG 126
Query: 406 ALLNCYCKELMTXXXXXXXXXXXXXRFASSPMVYNSLMTLYTKTNRHDKIPSIIQEMKAD 585
ALLNCYCKEL+T + S M YNSLMTLYTK + +KIP+IIQE+K+
Sbjct: 127 ALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSL 186
Query: 586 DVMPDCFTYNVWMRALAAMKDISGVERVIEEMKRDGRVTADWTTYSNLASIYVDAGMFQK 765
D+MPD +TYN+WMRALAA+ DISGVERVIEEMKRDGRV +DWTTYSNLASIYVDAG+F+K
Sbjct: 187 DIMPDSYTYNIWMRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEK 246
Query: 766 AEGALKELEKRNVGRDLSAYQFLITLYGRTGNLVEVYRIWRSLKLAHPRMANISYLNMIQ 945
AE ALKELEKRN RDL+A+QFLITLYGR GNL+EVYR+WRSL+LA P+ AN+SYLNMIQ
Sbjct: 247 AEKALKELEKRNACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQ 306
Query: 946 VLVNLKDLPGAEICFKEWESKCSTYDIRVVNVLLRAYTKEDMFEXXXXXXXXXXXXXXRL 1125
VLVNLKDLPGAE CF+EWES CS YDIRV N L+ AY K+ + E +
Sbjct: 307 VLVNLKDLPGAEKCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKP 366
Query: 1126 NAKTWEILLEYHLNKGDMKSVIYCADRGMKKGKTYNRIWVPPPNVVKSIMQYFEEKKDVN 1305
NAKTWEI L YHL +MK + C + G+ + WVP P ++ MQ+FE++KDV+
Sbjct: 367 NAKTWEIFLAYHLKNREMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFEQEKDVD 426
Query: 1306 GAEKFIEVLKSVQSELSTEVLEALIRTYTIAGKKSPGMRLRLKMENATVSEATEKLLDQI 1485
GAE F+E+LKS +L EV E+LIR Y AG+ SP MR RLKMEN VS++ +KLL+++
Sbjct: 427 GAEGFLEILKSTVEDLGVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCKKLLEEV 486
Query: 1486 CVE 1494
VE
Sbjct: 487 SVE 489
>ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|118487894|gb|ABK95769.1|
unknown [Populus trichocarpa] gi|222873242|gb|EEF10373.1|
predicted protein [Populus trichocarpa]
Length = 490
Score = 595 bits (1535), Expect = e-168
Identities = 303/482 (62%), Positives = 359/482 (74%)
Frame = +1
Query: 49 KTKLVAKRSSKYLEEALYKRLFRGGSSPKSVSNELTDFVKSRKLVYKWEVGVTLRKLRSR 228
+TK V KRS KYLEEALY RLF+ GSS SV +L F+KS K V+KWEVG T++KLRSR
Sbjct: 9 RTKSVTKRSKKYLEEALYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGDTIKKLRSR 68
Query: 229 KRFRPALKLSETMAKRGMNLTVSDHAIHLDLVAKARGITSAEEYFINLPEPAKNNLAYGA 408
+ PA+KLSETM+ RGMN TVSD AIHLDLVAK RGI +AE YFI+LPE +KN YGA
Sbjct: 69 NLYYPAVKLSETMSSRGMNKTVSDQAIHLDLVAKTRGIPAAENYFIDLPETSKNLRTYGA 128
Query: 409 LLNCYCKELMTXXXXXXXXXXXXXRFASSPMVYNSLMTLYTKTNRHDKIPSIIQEMKADD 588
LLNCYCKELMT S M YNSLMTLYTK + ++IP+IIQEMKAD+
Sbjct: 129 LLNCYCKELMTEEAEALIEKMKELNLGLSSMSYNSLMTLYTKVGQPERIPAIIQEMKADN 188
Query: 589 VMPDCFTYNVWMRALAAMKDISGVERVIEEMKRDGRVTADWTTYSNLASIYVDAGMFQKA 768
VMPD +TYNVWMRALAA+ DISGVERVIEEMKRDGRV A+WTTYSNLASIYVDAG F KA
Sbjct: 189 VMPDSYTYNVWMRALAAVNDISGVERVIEEMKRDGRVAANWTTYSNLASIYVDAGYFDKA 248
Query: 769 EGALKELEKRNVGRDLSAYQFLITLYGRTGNLVEVYRIWRSLKLAHPRMANISYLNMIQV 948
E ALKELEK N +DL A+QFLITLYGRTG L+EVYRIWRSL+LA P+ ANISYLNMIQV
Sbjct: 249 EKALKELEKINANKDLFAFQFLITLYGRTGKLIEVYRIWRSLRLAFPKTANISYLNMIQV 308
Query: 949 LVNLKDLPGAEICFKEWESKCSTYDIRVVNVLLRAYTKEDMFEXXXXXXXXXXXXXXRLN 1128
LVNLKD+PGAE CF+EWES CSTYDIRV NV++ AY KE + + + N
Sbjct: 309 LVNLKDVPGAEKCFREWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERARRRGAKPN 368
Query: 1129 AKTWEILLEYHLNKGDMKSVIYCADRGMKKGKTYNRIWVPPPNVVKSIMQYFEEKKDVNG 1308
+KTWEI +Y+L GD+K + C + G+ + WVP P +V S+M +FE++KDV+G
Sbjct: 369 SKTWEIFCDYYLKNGDVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHFEQQKDVDG 428
Query: 1309 AEKFIEVLKSVQSELSTEVLEALIRTYTIAGKKSPGMRLRLKMENATVSEATEKLLDQIC 1488
AE IE+LK +++ EV E+LIRTY AG+KS MR RLKMEN VS+ +KLL+ IC
Sbjct: 429 AEDLIEILKKAVDDVAVEVFESLIRTYAAAGRKSQLMRRRLKMENVEVSDDCQKLLEAIC 488
Query: 1489 VE 1494
VE
Sbjct: 489 VE 490
>ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532680|gb|EEF34462.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 490
Score = 595 bits (1534), Expect = e-167
Identities = 303/482 (62%), Positives = 356/482 (73%)
Frame = +1
Query: 49 KTKLVAKRSSKYLEEALYKRLFRGGSSPKSVSNELTDFVKSRKLVYKWEVGVTLRKLRSR 228
+TK VAKRS KYLEEALY RLF+ GSS V +L F+KS K VYKWEVG TL+KLRSR
Sbjct: 9 RTKNVAKRSKKYLEEALYFRLFKEGSSEVKVREQLNQFLKSSKRVYKWEVGDTLKKLRSR 68
Query: 229 KRFRPALKLSETMAKRGMNLTVSDHAIHLDLVAKARGITSAEEYFINLPEPAKNNLAYGA 408
+ PALKLSE M+KRGMN TVSD AIHLDLVAK RGI +AE +FI+LPE +KN+L YGA
Sbjct: 69 GLYYPALKLSEAMSKRGMNKTVSDQAIHLDLVAKTRGIPAAEIFFIDLPETSKNHLTYGA 128
Query: 409 LLNCYCKELMTXXXXXXXXXXXXXRFASSPMVYNSLMTLYTKTNRHDKIPSIIQEMKADD 588
LLNCYC +LMT S M YNSLMTLYTK + ++IP IIQEMK+D
Sbjct: 129 LLNCYCNQLMTEEAEALMEKMKELNLGLSSMSYNSLMTLYTKIGQPERIPGIIQEMKSDS 188
Query: 589 VMPDCFTYNVWMRALAAMKDISGVERVIEEMKRDGRVTADWTTYSNLASIYVDAGMFQKA 768
+MPD +TYNVWMRALAA+ DISG ERVIEEMKRDGRV ADWTTYSNLASIYVDA +F+KA
Sbjct: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTYSNLASIYVDAQLFEKA 248
Query: 769 EGALKELEKRNVGRDLSAYQFLITLYGRTGNLVEVYRIWRSLKLAHPRMANISYLNMIQV 948
E LKELEKRNV RD SA+QFLITLYGR GNL E+YRIWRSL+LA P+ +NISYLNMIQV
Sbjct: 249 EKTLKELEKRNVHRDHSAFQFLITLYGRIGNLHELYRIWRSLRLAFPKTSNISYLNMIQV 308
Query: 949 LVNLKDLPGAEICFKEWESKCSTYDIRVVNVLLRAYTKEDMFEXXXXXXXXXXXXXXRLN 1128
LVNLKDLPGAE CF+EWES CS YDIRV NVL++AY K+ + E + N
Sbjct: 309 LVNLKDLPGAEKCFREWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERAIGRGAKPN 368
Query: 1129 AKTWEILLEYHLNKGDMKSVIYCADRGMKKGKTYNRIWVPPPNVVKSIMQYFEEKKDVNG 1308
AKTWEI +Y+ GD+K + C + KG+ + W+P P VV S M +FE++KDV+G
Sbjct: 369 AKTWEIFSDYYFENGDIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHFEQQKDVDG 428
Query: 1309 AEKFIEVLKSVQSELSTEVLEALIRTYTIAGKKSPGMRLRLKMENATVSEATEKLLDQIC 1488
AE FIE+LK ++ V E+LIRTY AG+ S +R RLKMEN VSEA +KLL+ IC
Sbjct: 429 AEGFIEILKKATDDVEANVFESLIRTYAAAGRTSQVLRRRLKMENVEVSEAGQKLLEMIC 488
Query: 1489 VE 1494
VE
Sbjct: 489 VE 490