BLASTX nr result

ID: Dioscorea21_contig00010455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010455
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [...   166   9e-39
ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|2...   160   9e-37
emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]   159   1e-36
gb|ACZ64259.1| RPM1 interacting protein 4 transcript 2b [Lactuca...   154   4e-35
gb|ACZ64257.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...   153   1e-34

>ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [Vitis vinifera]
          Length = 261

 Score =  166 bits (421), Expect = 9e-39
 Identities = 103/285 (36%), Positives = 158/285 (55%), Gaps = 9/285 (3%)
 Frame = +3

Query: 198  MAQKAHVPKFGNWEIDDNVPYTQYFDNARMGNNYGGKFNPNDPSDNPNAFKESSPVQVRD 377
            MAQ++HVPKFGNWE ++NVPYT YFD AR G       NPNDP +NP+ F          
Sbjct: 1    MAQRSHVPKFGNWESEENVPYTAYFDKARKGRTGTKIINPNDPQENPDMF---------- 50

Query: 378  TRTKPKYEDRGTKSRTPPSQGMKYKSELEDQKNKNWQYENK-----GNNKNHLRPTSHYD 542
                    D  +++R+PP    + ++E E+   +   +E++     G+ K      +  D
Sbjct: 51   -------SDNASEARSPP----RTRAEQEESIGQQVTHEHRLSKEDGDQKQVTDSPARND 99

Query: 543  SRPQKPASSPPRRRYGDK--KSDDQLQKPSRTYDG--YDFDPAPFQHQHQTKSANKGHGI 710
            +  ++P++    +R G +   S +  +KP RT  G  +  D +P    HQ + A +G G 
Sbjct: 100  NLGRRPSTESTHQRQGGRGMNSGETYRKP-RTSGGSEHSIDRSPLHPHHQARIAGRGTG- 157

Query: 711  SPSSWEKRGSGEASYGFAPNTSSNSKMRPVSRGDETNGKTSVVPKFGEWDECDPSSADGY 890
            SP SWE +GS   SY  +  T   S+M+P +RGDE+  K + VPKFG+WDE +PSSADGY
Sbjct: 158  SP-SWEGKGS---SYDSSHGTPGRSRMKP-TRGDESPDKGAAVPKFGDWDENNPSSADGY 212

Query: 891  SHIFSRMKEEKQTSSEKVRVISHDPMPTDRLKKDRSPKSTRCGCF 1025
            +HIF++++EE+QT +   RV      P+ +  +  +  S++  CF
Sbjct: 213  THIFNKVREERQTGA-ATRVPGMASEPSYQTNRKHNTSSSKSCCF 256


>ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|222843524|gb|EEE81071.1|
            predicted protein [Populus trichocarpa]
          Length = 264

 Score =  160 bits (404), Expect = 9e-37
 Identities = 101/283 (35%), Positives = 147/283 (51%), Gaps = 7/283 (2%)
 Frame = +3

Query: 198  MAQKAHVPKFGNWEIDDNVPYTQYFDNARMGNNYGGKFNPNDPSDNPNAFKE-SSPVQVR 374
            MAQ++HVPKFGNWE ++NVPYT YFD AR G   G   NPNDP +NP+   + ++P Q  
Sbjct: 1    MAQRSHVPKFGNWESEENVPYTAYFDKARKGRTGGKMINPNDPQENPDLVSDYAAPDQAP 60

Query: 375  DTRTKPKYEDRGTKSRTPPSQGMKYKSELEDQKNKNWQYENKGNNKNHLRPTSHYDSRPQ 554
              R K   E+   +     +   +   E  D K    Q+ N      +L   + Y+  PQ
Sbjct: 61   PFRAKAPPEEAAGQGAVRQAHEHRTSREESDLK----QFANSPARNENLNRRASYEPAPQ 116

Query: 555  KPASSPPRRRYGDKKSDDQLQKPSRTYDGYD--FDPAPFQHQHQTKSANKGHGISPSSWE 728
            +     P   +G+       ++P+R   G +   + +P  H H   S       SP SWE
Sbjct: 117  RYGGRGP--SFGEAH-----KRPARYSIGSENSMEQSPI-HNHARISGRNSGAPSP-SWE 167

Query: 729  KRGSGEASYGFAPNTSSNSKMRPVSRGDETNGKTSVVPKFGEWDECDPSSADGYSHIFSR 908
             + S + S+G    T   S++RP  +GDE+  K + VPKFG+WDE +PSSADGY+HIF++
Sbjct: 168  GKNSNDGSHG----TPGRSRLRP--KGDESPDKGAAVPKFGDWDENNPSSADGYTHIFNK 221

Query: 909  MKEEKQTSSEKVRVISHDPMPTDR----LKKDRSPKSTRCGCF 1025
            ++EEKQ    K+       MPT+     ++K     S +C CF
Sbjct: 222  VREEKQIGEGKM-----PGMPTESSNAYVRKQTPSDSAKCCCF 259


>emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]
          Length = 599

 Score =  159 bits (402), Expect = 1e-36
 Identities = 95/253 (37%), Positives = 144/253 (56%), Gaps = 9/253 (3%)
 Frame = +3

Query: 204 QKAHVPKFGNWEIDDNVPYTQYFDNARMGNNYGGKFNPNDPSDNPNAFKESSPVQVRDTR 383
           Q++HVPKFGNWE ++NVPYT YFD AR G       NPNDP +NP+ F            
Sbjct: 10  QRSHVPKFGNWESEENVPYTAYFDKARKGRTGTKIINPNDPQENPDMF------------ 57

Query: 384 TKPKYEDRGTKSRTPPSQGMKYKSELEDQKNKNWQYENK-----GNNKNHLRPTSHYDSR 548
                 D  +++R+PP    + ++E E+   +   +E++     G+ K      +  D+ 
Sbjct: 58  -----SDNASEARSPP----RTRAEQEESIGQQVTHEHRLSKEDGDQKQVTDSPARNDNL 108

Query: 549 PQKPASSPPRRRYGDK--KSDDQLQKPSRTYDG--YDFDPAPFQHQHQTKSANKGHGISP 716
            ++P++    +R G +   S +  +KP RT  G  +  D +P    HQ + A +G G SP
Sbjct: 109 GRRPSTESTHQRQGGRGMNSGETYRKP-RTSGGSEHSIDRSPLHPHHQARIAGRGTG-SP 166

Query: 717 SSWEKRGSGEASYGFAPNTSSNSKMRPVSRGDETNGKTSVVPKFGEWDECDPSSADGYSH 896
            SWE +GS   SY  +  T   S+M+P +RGDE+  K + VPKFG+WDE +PSSADGY+H
Sbjct: 167 -SWEGKGS---SYDSSHGTPGRSRMKP-TRGDESPDKGAAVPKFGDWDENNPSSADGYTH 221

Query: 897 IFSRMKEEKQTSS 935
           IF++++EE+QT +
Sbjct: 222 IFNKVREERQTGA 234


>gb|ACZ64259.1| RPM1 interacting protein 4 transcript 2b [Lactuca tatarica]
          Length = 243

 Score =  154 bits (390), Expect = 4e-35
 Identities = 97/276 (35%), Positives = 139/276 (50%)
 Frame = +3

Query: 198  MAQKAHVPKFGNWEIDDNVPYTQYFDNARMGNNYGGKFNPNDPSDNPNAFKESSPVQVRD 377
            MAQ+  VPKFGNWE +DNVPYT YFD AR G   G   NPNDP +NP  F + +P     
Sbjct: 1    MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMFADKTPPTPPR 60

Query: 378  TRTKPKYEDRGTKSRTPPSQGMKYKSELEDQKNKNWQYENKGNNKNHLRPTSHYDSRPQK 557
            +R +P+ E  G ++  P  +  +Y+       N N      G         S Y    Q 
Sbjct: 61   SRPQPE-EPVGRRAVRPSREENEYQ-----PPNDNADRRTSGG--------SAYQRGGQG 106

Query: 558  PASSPPRRRYGDKKSDDQLQKPSRTYDGYDFDPAPFQHQHQTKSANKGHGISPSSWEKRG 737
             A+  P +     ++               FD +P    +Q K A  G G    +WE + 
Sbjct: 107  TAAGRPVKHSAGSEN--------------SFDRSPLHPHYQAKGA-AGKGSGSPAWEGKN 151

Query: 738  SGEASYGFAPNTSSNSKMRPVSRGDETNGKTSVVPKFGEWDECDPSSADGYSHIFSRMKE 917
            S ++S+G    T S S+M+PV RGDE+  + + VP+FGEWDE +PSSAD Y+HIF++++E
Sbjct: 152  SYDSSHG----TPSRSRMKPV-RGDESPDRGAAVPRFGEWDENNPSSADNYTHIFNKVRE 206

Query: 918  EKQTSSEKVRVISHDPMPTDRLKKDRSPKSTRCGCF 1025
            E+ T S        D  P   + +D+   + +C CF
Sbjct: 207  ERVTGSPMTS--GSDARPNYNIPRDQK-TNNKCSCF 239


>gb|ACZ64257.1| RPM1 interacting protein 4 transcript 2 [Lactuca viminea]
          Length = 243

 Score =  153 bits (386), Expect = 1e-34
 Identities = 96/279 (34%), Positives = 141/279 (50%), Gaps = 3/279 (1%)
 Frame = +3

Query: 198  MAQKAHVPKFGNWEIDDNVPYTQYFDNARMGNNYGGKFNPNDPSDNPNAFKESSPVQVRD 377
            MAQ+  VPKFGNWE +DNVPYT YFD AR G   G   NPNDP +NP  F + +P     
Sbjct: 1    MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMFADKTPPTAHR 60

Query: 378  TRTKPKYEDRGTKSRTPPSQGMKYKSELEDQKNKNWQYENKGNNKNHLRPT---SHYDSR 548
            +R +P+ E  G ++  P  +  +Y+                  N N +R T   S Y   
Sbjct: 61   SRPQPE-EPVGRRAVRPSREENEYQPP----------------NDNVVRRTSGGSAYQRG 103

Query: 549  PQKPASSPPRRRYGDKKSDDQLQKPSRTYDGYDFDPAPFQHQHQTKSANKGHGISPSSWE 728
             Q  A+  P +     ++               FD +P    +Q K A  G G    +WE
Sbjct: 104  GQGTAAGRPVKHSAGSEN--------------SFDRSPLHPHYQAKVA-AGKGSGSPAWE 148

Query: 729  KRGSGEASYGFAPNTSSNSKMRPVSRGDETNGKTSVVPKFGEWDECDPSSADGYSHIFSR 908
             + S ++S+G    T S S+M+P +RGD++  + + VP+FGEWDE +PSSAD Y+HIF++
Sbjct: 149  GKNSYDSSHG----TPSRSRMKP-ARGDDSPDRGAAVPRFGEWDENNPSSADNYTHIFNK 203

Query: 909  MKEEKQTSSEKVRVISHDPMPTDRLKKDRSPKSTRCGCF 1025
            ++EE+ T S        D  P   + +D+   + +C CF
Sbjct: 204  VREERVTGSPMTS--GSDARPNYNIPRDQK-SNNKCSCF 239


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