BLASTX nr result

ID: Dioscorea21_contig00010443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010443
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307469.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putativ...    61   1e-07
ref|XP_004142579.1| PREDICTED: putative DEAD-box ATP-dependent R...    55   6e-06

>ref|XP_002307469.1| predicted protein [Populus trichocarpa] gi|222856918|gb|EEE94465.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/49 (53%), Positives = 38/49 (77%)
 Frame = -3

Query: 369 SGNNQMRGNKRHFKGGRNHFSVPNANAPSELRNMEQVRKNRQHEASRIA 223
           SGN Q+RGN R+F+G +   S+PNAN  SE++++EQVRK RQ +A R++
Sbjct: 103 SGNRQLRGNNRNFRGSKKQHSLPNANVRSEIKDLEQVRKERQKKADRVS 151


>ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223528461|gb|EEF30493.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 789

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/51 (50%), Positives = 40/51 (78%)
 Frame = -3

Query: 369 SGNNQMRGNKRHFKGGRNHFSVPNANAPSELRNMEQVRKNRQHEASRIARL 217
           SG+N++RGN R FKGG+    +PNAN  SE++++EQVRK RQ +AS+++ +
Sbjct: 717 SGDNRLRGNNRKFKGGKKQNFMPNANVRSEIKSLEQVRKERQKKASQMSHM 767


>ref|XP_004142579.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Cucumis sativus]
          Length = 789

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/51 (45%), Positives = 35/51 (68%)
 Frame = -3

Query: 369 SGNNQMRGNKRHFKGGRNHFSVPNANAPSELRNMEQVRKNRQHEASRIARL 217
           +GN +  GNKR F  GRN  SVPNA+   E++N++Q+RK RQ +A ++  +
Sbjct: 718 TGNQRFSGNKRRFGQGRNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHM 768


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