BLASTX nr result

ID: Dioscorea21_contig00010440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010440
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315219.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_003519348.1| PREDICTED: AP3-complex subunit beta-A-like [...    93   2e-17
ref|XP_003544215.1| PREDICTED: AP3-complex subunit beta-A-like [...    92   6e-17
ref|XP_003616410.1| AP-3 complex subunit beta-2 [Medicago trunca...    91   1e-16
ref|XP_002533153.1| conserved hypothetical protein [Ricinus comm...    90   2e-16

>ref|XP_002315219.1| predicted protein [Populus trichocarpa] gi|222864259|gb|EEF01390.1|
            predicted protein [Populus trichocarpa]
          Length = 991

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/71 (69%), Positives = 57/71 (80%)
 Frame = +3

Query: 9    DKFLVVARCLASKVLSNAYVQLVNVDMPVSSDTDNVSGLCLRFSGEILSNSKPCLITITA 188
            D FL+V   LA K+LSNA   LV+VDMP+S+  D+VSGLCLRFSGEILSNS PCLITITA
Sbjct: 898  DNFLLVCESLALKMLSNANFSLVSVDMPISAKHDDVSGLCLRFSGEILSNSMPCLITITA 957

Query: 189  DGKFSVPLEIL 221
            +GK S PL +L
Sbjct: 958  EGKCSEPLNVL 968


>ref|XP_003519348.1| PREDICTED: AP3-complex subunit beta-A-like [Glycine max]
          Length = 1129

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/69 (65%), Positives = 56/69 (81%)
 Frame = +3

Query: 6    DDKFLVVARCLASKVLSNAYVQLVNVDMPVSSDTDNVSGLCLRFSGEILSNSKPCLITIT 185
            +DKFLV+   LA K+LSNA + LV+VDMPV+++ D+ SGLCLRFS EILSNS PCLIT+T
Sbjct: 1028 EDKFLVICETLALKMLSNANLSLVSVDMPVAANLDDASGLCLRFSSEILSNSMPCLITVT 1087

Query: 186  ADGKFSVPL 212
             +GK S PL
Sbjct: 1088 VEGKCSDPL 1096


>ref|XP_003544215.1| PREDICTED: AP3-complex subunit beta-A-like [Glycine max]
          Length = 1129

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/69 (63%), Positives = 56/69 (81%)
 Frame = +3

Query: 6    DDKFLVVARCLASKVLSNAYVQLVNVDMPVSSDTDNVSGLCLRFSGEILSNSKPCLITIT 185
            +DKFLV+   LA ++LSNA + LV+VDMPV+++ D+ SGLCLRFS EILSNS PCLIT+T
Sbjct: 1028 EDKFLVICETLALQMLSNANLSLVSVDMPVAANLDDASGLCLRFSSEILSNSMPCLITVT 1087

Query: 186  ADGKFSVPL 212
             +GK S PL
Sbjct: 1088 VEGKCSDPL 1096


>ref|XP_003616410.1| AP-3 complex subunit beta-2 [Medicago truncatula]
            gi|355517745|gb|AES99368.1| AP-3 complex subunit beta-2
            [Medicago truncatula]
          Length = 1126

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/69 (63%), Positives = 55/69 (79%)
 Frame = +3

Query: 6    DDKFLVVARCLASKVLSNAYVQLVNVDMPVSSDTDNVSGLCLRFSGEILSNSKPCLITIT 185
            +D FLV+   LA K+LSNA + LV+VD+PV+S+ D+ SGLCLRFS EILSNS PCLIT+T
Sbjct: 1025 EDTFLVICESLALKMLSNANLSLVSVDLPVASNLDDASGLCLRFSSEILSNSMPCLITVT 1084

Query: 186  ADGKFSVPL 212
             +GK S PL
Sbjct: 1085 IEGKCSDPL 1093


>ref|XP_002533153.1| conserved hypothetical protein [Ricinus communis]
            gi|223527048|gb|EEF29234.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1121

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/70 (62%), Positives = 56/70 (80%)
 Frame = +3

Query: 9    DKFLVVARCLASKVLSNAYVQLVNVDMPVSSDTDNVSGLCLRFSGEILSNSKPCLITITA 188
            DKFL+V   LA K+LSNA + LV+VDMP++ + D+ SGLCLRFS EILSNS PCLIT+TA
Sbjct: 1028 DKFLLVCESLAVKMLSNANLFLVSVDMPIAVNLDDASGLCLRFSSEILSNSIPCLITLTA 1087

Query: 189  DGKFSVPLEI 218
            +GK + PL +
Sbjct: 1088 EGKCTEPLNV 1097


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