BLASTX nr result

ID: Dioscorea21_contig00010418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010418
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001150981.1| BCAS2 protein [Zea mays] gi|195643392|gb|ACG...   359   1e-96
gb|ACN35374.1| unknown [Zea mays] gi|414876950|tpg|DAA54081.1| T...   358   2e-96
ref|XP_002455411.1| hypothetical protein SORBIDRAFT_03g010330 [S...   353   4e-95
ref|XP_003566740.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   351   2e-94
dbj|BAJ95706.1| predicted protein [Hordeum vulgare subsp. vulgare]    348   1e-93

>ref|NP_001150981.1| BCAS2 protein [Zea mays] gi|195643392|gb|ACG41164.1| BCAS2 protein
            [Zea mays]
          Length = 254

 Score =  359 bits (921), Expect = 1e-96
 Identities = 179/250 (71%), Positives = 204/250 (81%), Gaps = 2/250 (0%)
 Frame = -1

Query: 1189 AGREVLMLEAPP--DAALEGWSAVRGDEDIDALPYIDEDYGNPRVKAEVDRLVEEEMRRS 1016
            A REVLMLEAPP  D A   W AV   E IDALPYID DYG+  VK EVDRLVEEEMRR 
Sbjct: 5    ATREVLMLEAPPPSDPAAGPWRAVPEAEAIDALPYIDGDYGDAAVKREVDRLVEEEMRRG 64

Query: 1015 VKKPADFLRDLPPMPKFDFENHPMLAREYERVRAGRPPATLEMSRYGLEPPPINKRNDVS 836
             +KPADFLRDLPP+P   FENHPMLA+EYERVRAG+PP  L+MSRYGLEPPP+NKRNDV 
Sbjct: 65   KRKPADFLRDLPPVPTAGFENHPMLAKEYERVRAGKPPFMLDMSRYGLEPPPMNKRNDVG 124

Query: 835  AWRQAVRNAQTLVQHQIIRIENLDLMVKYGVDVWKHQNKQTESFLSRLQAIALEYNENIE 656
            AWRQA+RNAQ+ +QHQIIRIENL+LM+KYGVDVWK QN+Q ES LSR+Q +A+EYNE IE
Sbjct: 125  AWRQALRNAQSQLQHQIIRIENLELMLKYGVDVWKLQNRQMESVLSRMQKMAVEYNERIE 184

Query: 655  NVNRERKFHQQNTGVELDALSAQWTELCLKNIGIQAACAELENHIEQLKMEAKESGLDLN 476
            NVNRERKFHQQNTG +L AL  +W ELC KNI IQAAC +L+NHI+QLK+EAKE G+ ++
Sbjct: 185  NVNRERKFHQQNTGGQLHALKMEWQELCQKNIAIQAACVDLQNHIDQLKLEAKELGMPMD 244

Query: 475  LNMETAPATS 446
             N  T P  S
Sbjct: 245  DNSGTDPQAS 254


>gb|ACN35374.1| unknown [Zea mays] gi|414876950|tpg|DAA54081.1| TPA: BCAS2 protein
            [Zea mays]
          Length = 254

 Score =  358 bits (919), Expect = 2e-96
 Identities = 178/250 (71%), Positives = 204/250 (81%), Gaps = 2/250 (0%)
 Frame = -1

Query: 1189 AGREVLMLEAPP--DAALEGWSAVRGDEDIDALPYIDEDYGNPRVKAEVDRLVEEEMRRS 1016
            A REVLMLEAPP  D A   W AV   E IDALPYID DYG+  VK EVDRLVEEEMRR 
Sbjct: 5    ATREVLMLEAPPPSDPAAGPWRAVPDAEAIDALPYIDGDYGDAAVKREVDRLVEEEMRRG 64

Query: 1015 VKKPADFLRDLPPMPKFDFENHPMLAREYERVRAGRPPATLEMSRYGLEPPPINKRNDVS 836
             +KPADFLRDLPP+P   FENHPML++EYERVRAG+PP  L+MSRYGLEPPP+NKRNDV 
Sbjct: 65   KRKPADFLRDLPPVPTAGFENHPMLSKEYERVRAGKPPFMLDMSRYGLEPPPMNKRNDVG 124

Query: 835  AWRQAVRNAQTLVQHQIIRIENLDLMVKYGVDVWKHQNKQTESFLSRLQAIALEYNENIE 656
            AWRQA+RNAQ+ +QHQIIRIENL+LM+KYGVDVWK QN+Q ES LSR+Q +A+EYNE IE
Sbjct: 125  AWRQALRNAQSQLQHQIIRIENLELMLKYGVDVWKLQNRQMESVLSRMQKMAVEYNERIE 184

Query: 655  NVNRERKFHQQNTGVELDALSAQWTELCLKNIGIQAACAELENHIEQLKMEAKESGLDLN 476
            NVNRERKFHQQNTG +L AL  +W ELC KNI IQAAC +L+NHI+QLK+EAKE G+ ++
Sbjct: 185  NVNRERKFHQQNTGGQLHALKMEWQELCQKNIAIQAACVDLQNHIDQLKLEAKELGMPMD 244

Query: 475  LNMETAPATS 446
             N  T P  S
Sbjct: 245  DNSGTDPQAS 254


>ref|XP_002455411.1| hypothetical protein SORBIDRAFT_03g010330 [Sorghum bicolor]
            gi|241927386|gb|EES00531.1| hypothetical protein
            SORBIDRAFT_03g010330 [Sorghum bicolor]
          Length = 254

 Score =  353 bits (907), Expect = 4e-95
 Identities = 175/245 (71%), Positives = 202/245 (82%), Gaps = 2/245 (0%)
 Frame = -1

Query: 1189 AGREVLMLEAPP--DAALEGWSAVRGDEDIDALPYIDEDYGNPRVKAEVDRLVEEEMRRS 1016
            A REVLMLEAPP  D +   W A    E IDALPYID DYG+P VK EVDRLVEEEMRR 
Sbjct: 5    ATREVLMLEAPPPSDPSAGQWRAAPDAEAIDALPYIDGDYGDPAVKREVDRLVEEEMRRG 64

Query: 1015 VKKPADFLRDLPPMPKFDFENHPMLAREYERVRAGRPPATLEMSRYGLEPPPINKRNDVS 836
             +KPADFLRDLPP+P   FENHPMLA+EYERVRAG+PP  L+MSRYGLEPPP+N+RNDV 
Sbjct: 65   KRKPADFLRDLPPVPTAGFENHPMLAKEYERVRAGKPPFMLDMSRYGLEPPPMNRRNDVG 124

Query: 835  AWRQAVRNAQTLVQHQIIRIENLDLMVKYGVDVWKHQNKQTESFLSRLQAIALEYNENIE 656
            AWRQA+RNAQ+ +QHQIIRIENL+LM+KYGVDVWK QNKQ ES LSR+Q +A+EYNE IE
Sbjct: 125  AWRQALRNAQSQLQHQIIRIENLELMLKYGVDVWKLQNKQMESVLSRMQKMAVEYNERIE 184

Query: 655  NVNRERKFHQQNTGVELDALSAQWTELCLKNIGIQAACAELENHIEQLKMEAKESGLDLN 476
            NVNRERKFHQQNTG +L AL+ +W ELC KNI IQAAC +L+N I+QLK+EAKE G+ ++
Sbjct: 185  NVNRERKFHQQNTGGQLHALTMEWQELCQKNIAIQAACVDLQNQIDQLKLEAKELGMPMD 244

Query: 475  LNMET 461
             N  T
Sbjct: 245  DNNGT 249


>ref|XP_003566740.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Brachypodium
            distachyon]
          Length = 257

 Score =  351 bits (901), Expect = 2e-94
 Identities = 173/251 (68%), Positives = 209/251 (83%), Gaps = 1/251 (0%)
 Frame = -1

Query: 1189 AGREVLMLEAPP-DAALEGWSAVRGDEDIDALPYIDEDYGNPRVKAEVDRLVEEEMRRSV 1013
            A REVLMLEAPP +AA   W +    E +DALPYID DYG+P VK EVDRLVEEEMRR+ 
Sbjct: 5    ATREVLMLEAPPAEAAGVPWRSPPDAEVVDALPYIDGDYGDPSVKREVDRLVEEEMRRAH 64

Query: 1012 KKPADFLRDLPPMPKFDFENHPMLAREYERVRAGRPPATLEMSRYGLEPPPINKRNDVSA 833
            +KPADFLRDLPP+P F FEN+PMLA+EY+RVRAG+PPAT+EMSRYGLEPPP NKRNDV+A
Sbjct: 65   RKPADFLRDLPPVPAFGFENNPMLAKEYDRVRAGKPPATIEMSRYGLEPPPANKRNDVAA 124

Query: 832  WRQAVRNAQTLVQHQIIRIENLDLMVKYGVDVWKHQNKQTESFLSRLQAIALEYNENIEN 653
            WRQA+RNAQ+ +QHQIIRIENL+LM+K+GV+VWK QN++ ES LSR+Q +A+EYNE IE 
Sbjct: 125  WRQALRNAQSQLQHQIIRIENLELMLKHGVEVWKLQNRKMESILSRMQKMAVEYNEKIEI 184

Query: 652  VNRERKFHQQNTGVELDALSAQWTELCLKNIGIQAACAELENHIEQLKMEAKESGLDLNL 473
            VNRERKFHQQNTG +L AL+ +W ELC KNI IQAAC +L+N I+QLK+EAKE G+ ++ 
Sbjct: 185  VNRERKFHQQNTGGQLHALTIEWQELCQKNIAIQAACVDLQNQIDQLKLEAKEQGMPMDD 244

Query: 472  NMETAPATS*G 440
            + E  P  S G
Sbjct: 245  STENNPQASVG 255


>dbj|BAJ95706.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 256

 Score =  348 bits (894), Expect = 1e-93
 Identities = 173/251 (68%), Positives = 203/251 (80%), Gaps = 1/251 (0%)
 Frame = -1

Query: 1189 AGREVLMLEAPP-DAALEGWSAVRGDEDIDALPYIDEDYGNPRVKAEVDRLVEEEMRRSV 1013
            A REVLMLEAPP +AA   W      E +DALPYID DYG+P VK EVDRLVEEEMRR+ 
Sbjct: 5    ATREVLMLEAPPSEAAGVPWRPPPDAETVDALPYIDGDYGDPAVKREVDRLVEEEMRRAH 64

Query: 1012 KKPADFLRDLPPMPKFDFENHPMLAREYERVRAGRPPATLEMSRYGLEPPPINKRNDVSA 833
            +KPADFLRDLPP P   FENHPMLA+EYERVRAG+PPAT+EMSRYGLEPPP NKRNDV A
Sbjct: 65   RKPADFLRDLPPYPIIGFENHPMLAKEYERVRAGKPPATIEMSRYGLEPPPANKRNDVVA 124

Query: 832  WRQAVRNAQTLVQHQIIRIENLDLMVKYGVDVWKHQNKQTESFLSRLQAIALEYNENIEN 653
            W+QA+RNAQ+ +QHQI+RIENL+LM+K+GV+VWK QN++ ES LSR Q + LEYNE IE 
Sbjct: 125  WKQALRNAQSQLQHQIVRIENLELMLKHGVEVWKLQNRKMESVLSRTQKMTLEYNEKIET 184

Query: 652  VNRERKFHQQNTGVELDALSAQWTELCLKNIGIQAACAELENHIEQLKMEAKESGLDLNL 473
            VNRERKFHQQNTG +L AL+ +W ELC KNI IQAAC +L+N I+QLK+EAKE G+ +  
Sbjct: 185  VNRERKFHQQNTGGQLHALTVEWQELCQKNIAIQAACVDLQNQIDQLKLEAKEQGMPMAG 244

Query: 472  NMETAPATS*G 440
            + ET P  S G
Sbjct: 245  SNETNPQASVG 255


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