BLASTX nr result

ID: Dioscorea21_contig00010406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010406
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ97382.1| predicted protein [Hordeum vulgare subsp. vulgare]    118   6e-25
ref|NP_001240079.1| uncharacterized protein LOC100805970 [Glycin...   118   6e-25
ref|NP_001150356.1| PRKR interacting protein 1 [Zea mays] gi|195...   117   1e-24
ref|NP_001149989.1| LOC100283616 [Zea mays] gi|195619758|gb|ACG3...   117   1e-24
ref|XP_003536611.1| PREDICTED: PRKR-interacting protein 1-like [...   116   2e-24

>dbj|BAJ97382.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 196

 Score =  118 bits (295), Expect = 6e-25
 Identities = 70/126 (55%), Positives = 82/126 (65%), Gaps = 2/126 (1%)
 Frame = -1

Query: 374 MSTPSRESGAG--GEGSVGDLMLVAAGAASQKAGDKAGTLVEYXXXXXXGVLMREDEEEL 201
           M+ P+R SG     + SVGD               K   LVE       GV +REDEE+L
Sbjct: 16  MAPPARVSGGELVAKASVGD-------------SGKQLVLVEGGGKSSGGVKLREDEEDL 62

Query: 200 EVKLRRIIDNVPVRVSNTXXXXXXXXXGDFHQYRQMRRKEQDRLARMDSDYQRRKQLAEF 21
           EVKLRRI++NVPVRVSNT         GDFHQYRQMRR+EQDR+ RM+SDY+RRKQ+AEF
Sbjct: 63  EVKLRRIMENVPVRVSNTSGSSAGSGSGDFHQYRQMRRREQDRITRMESDYERRKQVAEF 122

Query: 20  NLRREE 3
           NLRREE
Sbjct: 123 NLRREE 128


>ref|NP_001240079.1| uncharacterized protein LOC100805970 [Glycine max]
           gi|255646408|gb|ACU23683.1| unknown [Glycine max]
          Length = 170

 Score =  118 bits (295), Expect = 6e-25
 Identities = 68/116 (58%), Positives = 79/116 (68%), Gaps = 3/116 (2%)
 Frame = -1

Query: 341 GEGSVGDLMLVAAGAASQKAGDKAGT---LVEYXXXXXXGVLMREDEEELEVKLRRIIDN 171
           G+   GD  +V A   S+     A     +VEY       V ++E+EE+LEVKLRRIIDN
Sbjct: 4   GKPRGGDFQMVPAPGTSKPPLPPAAASNAIVEYTP-----VSLKEEEEDLEVKLRRIIDN 58

Query: 170 VPVRVSNTXXXXXXXXXGDFHQYRQMRRKEQDRLARMDSDYQRRKQLAEFNLRREE 3
           VPVRVSNT         GDFHQYRQMRRKEQDRLARM+ DYQ+RK+LAEFNLRREE
Sbjct: 59  VPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKELAEFNLRREE 114


>ref|NP_001150356.1| PRKR interacting protein 1 [Zea mays] gi|195638618|gb|ACG38777.1|
           PRKR interacting protein 1 [Zea mays]
           gi|223945853|gb|ACN27010.1| unknown [Zea mays]
           gi|413955496|gb|AFW88145.1| PRKR interacting protein 1
           [Zea mays]
          Length = 177

 Score =  117 bits (293), Expect = 1e-24
 Identities = 67/133 (50%), Positives = 79/133 (59%)
 Frame = -1

Query: 401 AGKSSSRFTMSTPSRESGAGGEGSVGDLMLVAAGAASQKAGDKAGTLVEYXXXXXXGVLM 222
           A  S S      P    G    G  G  ++VA  A  +  G K                +
Sbjct: 3   APNSDSNMQQLVPIAPPGKASGGDSGKELVVADPAGKRSGGVK----------------L 46

Query: 221 REDEEELEVKLRRIIDNVPVRVSNTXXXXXXXXXGDFHQYRQMRRKEQDRLARMDSDYQR 42
           REDEE+LEVKLRRI++NVPVRVSNT         GDFHQYRQMRR+EQDRLARMD+DYQ+
Sbjct: 47  REDEEDLEVKLRRIMENVPVRVSNTSGSSAGSGSGDFHQYRQMRRREQDRLARMDADYQK 106

Query: 41  RKQLAEFNLRREE 3
           RK++AEF LRREE
Sbjct: 107 RKEIAEFELRREE 119


>ref|NP_001149989.1| LOC100283616 [Zea mays] gi|195619758|gb|ACG31709.1| PRKR
           interacting protein 1 [Zea mays]
           gi|195635893|gb|ACG37415.1| PRKR interacting protein 1
           [Zea mays] gi|414867315|tpg|DAA45872.1| TPA: PRKR
           interacting protein 1 [Zea mays]
          Length = 177

 Score =  117 bits (293), Expect = 1e-24
 Identities = 65/118 (55%), Positives = 82/118 (69%), Gaps = 1/118 (0%)
 Frame = -1

Query: 353 SGAGGEGSVGDLMLVAA-GAASQKAGDKAGTLVEYXXXXXXGVLMREDEEELEVKLRRII 177
           S    + ++  L+ +A  G AS    +K   +V+       GV +REDEE+LEVKLRRI+
Sbjct: 2   SAPNSDSNMQQLVPIAPPGKASGGDSEKGLVVVDLAGKRSGGVKLREDEEDLEVKLRRIM 61

Query: 176 DNVPVRVSNTXXXXXXXXXGDFHQYRQMRRKEQDRLARMDSDYQRRKQLAEFNLRREE 3
           +NVPVRVSNT         GDFHQYRQMRR+EQDRLARMD+DYQ+RK++AEF LRREE
Sbjct: 62  ENVPVRVSNTSGSSAGSGSGDFHQYRQMRRREQDRLARMDADYQKRKKMAEFELRREE 119


>ref|XP_003536611.1| PREDICTED: PRKR-interacting protein 1-like [Glycine max]
          Length = 170

 Score =  116 bits (290), Expect = 2e-24
 Identities = 65/107 (60%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
 Frame = -1

Query: 317 MLVAAGAASQKAGDKAGT--LVEYXXXXXXGVLMREDEEELEVKLRRIIDNVPVRVSNTX 144
           M+ A G +       A T  +VEY       V ++EDEE+LE+KLRRIIDNVPVRVSNT 
Sbjct: 13  MVPAPGTSKPPLPPVAATNAIVEYTP-----VSLKEDEEDLEIKLRRIIDNVPVRVSNTS 67

Query: 143 XXXXXXXXGDFHQYRQMRRKEQDRLARMDSDYQRRKQLAEFNLRREE 3
                   GDFHQYRQMRRKEQDRLARM+ DYQ+RK++AEFNLRREE
Sbjct: 68  GSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKEVAEFNLRREE 114


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