BLASTX nr result

ID: Dioscorea21_contig00010382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010382
         (1510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun...   413   e-113
emb|CBI15329.3| unnamed protein product [Vitis vinifera]              413   e-113
ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subun...   413   e-113
ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...   411   e-112
ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   397   e-108

>ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis
            vinifera]
          Length = 440

 Score =  413 bits (1062), Expect = e-113
 Identities = 195/253 (77%), Positives = 217/253 (85%)
 Frame = +1

Query: 667  KPINDLDFHPQCPILISGAKDCTIKFFDYSKSVARRAYRVIQDTHNVRSVSFHPSGEFLL 846
            +PINDLDFHPQ  +LISGAKD TIKFFD+SK+VA+RA+RVIQDTHNVRSVSFHPSG+FLL
Sbjct: 188  QPINDLDFHPQSTVLISGAKDHTIKFFDFSKTVAKRAFRVIQDTHNVRSVSFHPSGDFLL 247

Query: 847  AGTDHPIPHLYDVNTFQCYLSANAQELNAKAAINQVRYSCTGGVYVTASKDGSIRIWDGA 1026
            AGTDHP+ HLYDVNTFQCYLSAN Q+L   A+INQVRYS  G +YVTASKDG+IR+WDG 
Sbjct: 248  AGTDHPVAHLYDVNTFQCYLSANVQDLGISASINQVRYSSNGDMYVTASKDGAIRLWDGV 307

Query: 1027 TAQCVRPIIGAHGLNEATSACFTKDQRFVLSCGKDSTVKLWEVGTGRLVKQYTGAVHTQL 1206
            TA CVR I+GAHG  EATSA FTKDQRFVLSCGKDS+VKLWE+G+G+LVKQY GA HTQL
Sbjct: 308  TANCVRSIVGAHGTAEATSASFTKDQRFVLSCGKDSSVKLWEIGSGKLVKQYLGAAHTQL 367

Query: 1207 RCQAVFNESEDFIXXXXXXXXXXXXWDTLTAEKVSRWPSNHIGAPRWLEHSPTEAAFVSC 1386
            RCQAVFNE+E+F+            WD LTAE V+R PSNHIGAPRWLEHSPTEAAFVSC
Sbjct: 368  RCQAVFNETEEFVLSIDEQSNEIVVWDALTAEIVARLPSNHIGAPRWLEHSPTEAAFVSC 427

Query: 1387 GNDRSVRFWKETL 1425
            G DRSVRFWKE L
Sbjct: 428  GTDRSVRFWKEIL 440


>emb|CBI15329.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score =  413 bits (1062), Expect = e-113
 Identities = 195/253 (77%), Positives = 217/253 (85%)
 Frame = +1

Query: 667  KPINDLDFHPQCPILISGAKDCTIKFFDYSKSVARRAYRVIQDTHNVRSVSFHPSGEFLL 846
            +PINDLDFHPQ  +LISGAKD TIKFFD+SK+VA+RA+RVIQDTHNVRSVSFHPSG+FLL
Sbjct: 232  QPINDLDFHPQSTVLISGAKDHTIKFFDFSKTVAKRAFRVIQDTHNVRSVSFHPSGDFLL 291

Query: 847  AGTDHPIPHLYDVNTFQCYLSANAQELNAKAAINQVRYSCTGGVYVTASKDGSIRIWDGA 1026
            AGTDHP+ HLYDVNTFQCYLSAN Q+L   A+INQVRYS  G +YVTASKDG+IR+WDG 
Sbjct: 292  AGTDHPVAHLYDVNTFQCYLSANVQDLGISASINQVRYSSNGDMYVTASKDGAIRLWDGV 351

Query: 1027 TAQCVRPIIGAHGLNEATSACFTKDQRFVLSCGKDSTVKLWEVGTGRLVKQYTGAVHTQL 1206
            TA CVR I+GAHG  EATSA FTKDQRFVLSCGKDS+VKLWE+G+G+LVKQY GA HTQL
Sbjct: 352  TANCVRSIVGAHGTAEATSASFTKDQRFVLSCGKDSSVKLWEIGSGKLVKQYLGAAHTQL 411

Query: 1207 RCQAVFNESEDFIXXXXXXXXXXXXWDTLTAEKVSRWPSNHIGAPRWLEHSPTEAAFVSC 1386
            RCQAVFNE+E+F+            WD LTAE V+R PSNHIGAPRWLEHSPTEAAFVSC
Sbjct: 412  RCQAVFNETEEFVLSIDEQSNEIVVWDALTAEIVARLPSNHIGAPRWLEHSPTEAAFVSC 471

Query: 1387 GNDRSVRFWKETL 1425
            G DRSVRFWKE L
Sbjct: 472  GTDRSVRFWKEIL 484


>ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subunit 1-like [Glycine max]
          Length = 425

 Score =  413 bits (1061), Expect = e-113
 Identities = 192/253 (75%), Positives = 215/253 (84%)
 Frame = +1

Query: 667  KPINDLDFHPQCPILISGAKDCTIKFFDYSKSVARRAYRVIQDTHNVRSVSFHPSGEFLL 846
            +PINDLDFHPQ  ILISGAKD TIKFFD SK+ A+RAYRVIQDTHNVRSVSFHPSG+FLL
Sbjct: 173  QPINDLDFHPQGTILISGAKDQTIKFFDISKTNAKRAYRVIQDTHNVRSVSFHPSGDFLL 232

Query: 847  AGTDHPIPHLYDVNTFQCYLSANAQELNAKAAINQVRYSCTGGVYVTASKDGSIRIWDGA 1026
            AGTDH IPHLYD+NTFQCYLSAN  E +   AINQ+RYSCTG +YVTASKDG+IR+WDG 
Sbjct: 233  AGTDHAIPHLYDINTFQCYLSANIPETSPSGAINQIRYSCTGSMYVTASKDGAIRLWDGI 292

Query: 1027 TAQCVRPIIGAHGLNEATSACFTKDQRFVLSCGKDSTVKLWEVGTGRLVKQYTGAVHTQL 1206
            TA CVR I  AHG  EATSA FTKDQRFVLSCGKDST+KLWEVG+GRLVKQY GA+HTQL
Sbjct: 293  TANCVRSITAAHGTAEATSAIFTKDQRFVLSCGKDSTLKLWEVGSGRLVKQYLGAIHTQL 352

Query: 1207 RCQAVFNESEDFIXXXXXXXXXXXXWDTLTAEKVSRWPSNHIGAPRWLEHSPTEAAFVSC 1386
            RCQA+FNE+E+FI            WD +T EKV++WPSNH+GAPRWLEHSP E+AF+SC
Sbjct: 353  RCQAIFNETEEFILSIDELSNEIVIWDAMTTEKVAKWPSNHVGAPRWLEHSPIESAFISC 412

Query: 1387 GNDRSVRFWKETL 1425
            G DRSVRFWKET+
Sbjct: 413  GTDRSVRFWKETV 425


>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
            communis] gi|223546234|gb|EEF47736.1| Cleavage
            stimulation factor 50 kDa subunit, putative [Ricinus
            communis]
          Length = 435

 Score =  411 bits (1056), Expect = e-112
 Identities = 190/252 (75%), Positives = 215/252 (85%)
 Frame = +1

Query: 667  KPINDLDFHPQCPILISGAKDCTIKFFDYSKSVARRAYRVIQDTHNVRSVSFHPSGEFLL 846
            +PINDLDFHPQ  +LISGAKD TIKFFD+SK+ A++A+RVIQDTHNVRSVSFHPSG+FLL
Sbjct: 183  QPINDLDFHPQNTVLISGAKDHTIKFFDFSKATAKKAFRVIQDTHNVRSVSFHPSGDFLL 242

Query: 847  AGTDHPIPHLYDVNTFQCYLSANAQELNAKAAINQVRYSCTGGVYVTASKDGSIRIWDGA 1026
            AGTDH I HLYDVNTFQCYLSAN  E+    AINQVRYS TGG+YVTASKDG+IR+WDG 
Sbjct: 243  AGTDHQIAHLYDVNTFQCYLSANVPEIGMNGAINQVRYSSTGGMYVTASKDGAIRLWDGV 302

Query: 1027 TAQCVRPIIGAHGLNEATSACFTKDQRFVLSCGKDSTVKLWEVGTGRLVKQYTGAVHTQL 1206
            TA C+R I+GAHG  E+TSA FTKDQRFVLSCGKDS++KLWEVG+GRLVKQY GA HTQL
Sbjct: 303  TANCIRSIVGAHGTAESTSATFTKDQRFVLSCGKDSSIKLWEVGSGRLVKQYIGATHTQL 362

Query: 1207 RCQAVFNESEDFIXXXXXXXXXXXXWDTLTAEKVSRWPSNHIGAPRWLEHSPTEAAFVSC 1386
            RCQAVFNE+E+F+            WD LTAEKV+RWPSNH GAPRW+EHSP EAAF+SC
Sbjct: 363  RCQAVFNETEEFVISIDEPSNEIIIWDALTAEKVARWPSNHNGAPRWIEHSPVEAAFISC 422

Query: 1387 GNDRSVRFWKET 1422
            G DRSVRFWK+T
Sbjct: 423  GTDRSVRFWKDT 434


>ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
            1-like [Cucumis sativus]
          Length = 435

 Score =  397 bits (1020), Expect = e-108
 Identities = 178/253 (70%), Positives = 214/253 (84%)
 Frame = +1

Query: 667  KPINDLDFHPQCPILISGAKDCTIKFFDYSKSVARRAYRVIQDTHNVRSVSFHPSGEFLL 846
            +PINDLDFHPQ  +L+SGAKD TIKFFD+SK  A++A+RVIQDTHNVRS+S HPSG++LL
Sbjct: 183  QPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSGDYLL 242

Query: 847  AGTDHPIPHLYDVNTFQCYLSANAQELNAKAAINQVRYSCTGGVYVTASKDGSIRIWDGA 1026
            AGTDH IPHLYDVNTFQC+LSAN  E+    AINQ+RYS TG +YVTASKDG++R+WDG 
Sbjct: 243  AGTDHQIPHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRLWDGI 302

Query: 1027 TAQCVRPIIGAHGLNEATSACFTKDQRFVLSCGKDSTVKLWEVGTGRLVKQYTGAVHTQL 1206
             A+C+R I+ AHG  EATSA FTKD+R+VLSCGKDS+VKLW+VGTGRLVKQY GA H QL
Sbjct: 303  GAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGATHIQL 362

Query: 1207 RCQAVFNESEDFIXXXXXXXXXXXXWDTLTAEKVSRWPSNHIGAPRWLEHSPTEAAFVSC 1386
            RCQAVFN++E+F+            WD LTAE+V+RWPSNH+GAPRWLEHSPTE+AF+SC
Sbjct: 363  RCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESAFISC 422

Query: 1387 GNDRSVRFWKETL 1425
            G D+S+RFWKE+L
Sbjct: 423  GTDKSIRFWKESL 435


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