BLASTX nr result
ID: Dioscorea21_contig00010357
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00010357
(547 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_174525.1| glycine cleavage system H protein [Arabidopsis ... 122 4e-26
ref|XP_002893726.1| hypothetical protein ARALYDRAFT_890824 [Arab... 121 8e-26
ref|XP_003611466.1| Glycine cleavage system H protein [Medicago ... 117 2e-24
ref|XP_003611464.1| Glycine cleavage system H protein [Medicago ... 117 2e-24
ref|NP_001065060.1| Os10g0516100 [Oryza sativa Japonica Group] g... 116 3e-24
>ref|NP_174525.1| glycine cleavage system H protein [Arabidopsis thaliana]
gi|12644523|sp|Q9LQL0.1|GCSH2_ARATH RecName:
Full=Probable glycine cleavage system H protein 2,
mitochondrial; Flags: Precursor
gi|8920623|gb|AAF81345.1|AC007767_25 Identical to a
glycine cleavage system H-protein precursor from
Arabidopsis thaliana gb|P25855. It contains a glycine
cleavage H-protein domain PF|01597. ESTs gb|R90208,
gb|AI994794, gb|AA605324, gb|N38240, gb|AV533336,
gb|AV534187, gb|AA597419 and gb|AA597515 come from this
gene [Arabidopsis thaliana]
gi|12083338|gb|AAG48828.1|AF332465_1 putative glycine
cleavage system H protein precursor [Arabidopsis
thaliana] gi|14326572|gb|AAK60330.1|AF385740_1
At1g32470/F5D14_10 [Arabidopsis thaliana]
gi|18700238|gb|AAL77729.1| At1g32470/F5D14_10
[Arabidopsis thaliana] gi|332193369|gb|AEE31490.1|
glycine cleavage system H protein [Arabidopsis thaliana]
Length = 166
Score = 122 bits (306), Expect = 4e-26
Identities = 56/71 (78%), Positives = 66/71 (92%)
Frame = -1
Query: 520 KLWASSAANALKISCSGARAPLLPAFSITRCFSSVLDGLKYSNSHEWVKHEGSVATVGIT 341
++WASS ANALK+S S +++ LLPAFSI+RCFSSVL+GLKY+NSHEWVKHEGSVAT+GIT
Sbjct: 4 RMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATIGIT 63
Query: 340 DHAQGHLGEVV 308
DHAQ HLGEVV
Sbjct: 64 DHAQDHLGEVV 74
Score = 97.4 bits (241), Expect = 1e-18
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = -3
Query: 170 KLSETPGLINSSPYEDGWMIKVKPSSPAELDSLMGSKEYTKFCEEEDAHH 21
KL+E+PGLINSSPYEDGWMIKVKPSSPAEL++LMG KEYTKFCEEEDA H
Sbjct: 117 KLTESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166
>ref|XP_002893726.1| hypothetical protein ARALYDRAFT_890824 [Arabidopsis lyrata subsp.
lyrata] gi|297339568|gb|EFH69985.1| hypothetical protein
ARALYDRAFT_890824 [Arabidopsis lyrata subsp. lyrata]
Length = 166
Score = 121 bits (303), Expect = 8e-26
Identities = 55/71 (77%), Positives = 66/71 (92%)
Frame = -1
Query: 520 KLWASSAANALKISCSGARAPLLPAFSITRCFSSVLDGLKYSNSHEWVKHEGSVATVGIT 341
++WASS ANALK+S S +++ LLPAFSI+RCFSSVL+GLKY+NSHEWVKH+GSVAT+GIT
Sbjct: 4 RMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHDGSVATIGIT 63
Query: 340 DHAQGHLGEVV 308
DHAQ HLGEVV
Sbjct: 64 DHAQDHLGEVV 74
Score = 94.7 bits (234), Expect = 8e-18
Identities = 42/50 (84%), Positives = 48/50 (96%)
Frame = -3
Query: 170 KLSETPGLINSSPYEDGWMIKVKPSSPAELDSLMGSKEYTKFCEEEDAHH 21
KL+E+PGLINSSPYE+GWMIKVKPSSPAEL++LMG KEYTKFCE+EDA H
Sbjct: 117 KLTESPGLINSSPYEEGWMIKVKPSSPAELEALMGPKEYTKFCEDEDAAH 166
>ref|XP_003611466.1| Glycine cleavage system H protein [Medicago truncatula]
gi|355512801|gb|AES94424.1| Glycine cleavage system H
protein [Medicago truncatula]
Length = 145
Score = 117 bits (292), Expect = 2e-24
Identities = 54/71 (76%), Positives = 63/71 (88%)
Frame = -1
Query: 520 KLWASSAANALKISCSGARAPLLPAFSITRCFSSVLDGLKYSNSHEWVKHEGSVATVGIT 341
++WASS ANALK+S S +R L P FSI+RCFS+VLDGLKY++SHEWVKHEGSVAT+GIT
Sbjct: 4 RMWASSTANALKLSSSSSRLHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGSVATIGIT 63
Query: 340 DHAQGHLGEVV 308
DHAQ HLGEVV
Sbjct: 64 DHAQDHLGEVV 74
>ref|XP_003611464.1| Glycine cleavage system H protein [Medicago truncatula]
gi|355512799|gb|AES94422.1| Glycine cleavage system H
protein [Medicago truncatula]
gi|388518315|gb|AFK47219.1| unknown [Medicago
truncatula]
Length = 166
Score = 117 bits (292), Expect = 2e-24
Identities = 54/71 (76%), Positives = 63/71 (88%)
Frame = -1
Query: 520 KLWASSAANALKISCSGARAPLLPAFSITRCFSSVLDGLKYSNSHEWVKHEGSVATVGIT 341
++WASS ANALK+S S +R L P FSI+RCFS+VLDGLKY++SHEWVKHEGSVAT+GIT
Sbjct: 4 RMWASSTANALKLSSSSSRLHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGSVATIGIT 63
Query: 340 DHAQGHLGEVV 308
DHAQ HLGEVV
Sbjct: 64 DHAQDHLGEVV 74
Score = 91.7 bits (226), Expect = 7e-17
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = -3
Query: 170 KLSETPGLINSSPYEDGWMIKVKPSSPAELDSLMGSKEYTKFCEEEDAHH 21
KL+ PGLINSSPYEDGWMIK+KPS P+EL+SL+G+KEYTKFCEEEDA H
Sbjct: 117 KLTGKPGLINSSPYEDGWMIKIKPSDPSELESLLGAKEYTKFCEEEDAAH 166
>ref|NP_001065060.1| Os10g0516100 [Oryza sativa Japonica Group]
gi|152032493|sp|A2Z9B8.1|GCSH_ORYSI RecName:
Full=Glycine cleavage system H protein, mitochondrial;
Flags: Precursor gi|152032494|sp|A3C6G9.1|GCSH_ORYSJ
RecName: Full=Glycine cleavage system H protein,
mitochondrial; Flags: Precursor
gi|13786469|gb|AAK39594.1|AC025296_29 putative glycine
decarboxylase subunit [Oryza sativa Japonica Group]
gi|31433058|gb|AAP54618.1| Glycine cleavage system H
protein, mitochondrial precursor, putative, expressed
[Oryza sativa Japonica Group]
gi|113639669|dbj|BAF26974.1| Os10g0516100 [Oryza sativa
Japonica Group] gi|125532637|gb|EAY79202.1| hypothetical
protein OsI_34315 [Oryza sativa Indica Group]
gi|125575398|gb|EAZ16682.1| hypothetical protein
OsJ_32157 [Oryza sativa Japonica Group]
gi|215693048|dbj|BAG88468.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740831|dbj|BAG96987.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767804|dbj|BAH00033.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 164
Score = 116 bits (290), Expect = 3e-24
Identities = 57/71 (80%), Positives = 65/71 (91%)
Frame = -1
Query: 520 KLWASSAANALKISCSGARAPLLPAFSITRCFSSVLDGLKYSNSHEWVKHEGSVATVGIT 341
+LWASSAANALKISCSGA PA+SI+R FS+VLDGLKYS+SHEWVK++GSVAT+GIT
Sbjct: 4 RLWASSAANALKISCSGATRAA-PAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIGIT 62
Query: 340 DHAQGHLGEVV 308
DHAQGHLGEVV
Sbjct: 63 DHAQGHLGEVV 73
Score = 90.9 bits (224), Expect = 1e-16
Identities = 41/49 (83%), Positives = 45/49 (91%)
Frame = -3
Query: 170 KLSETPGLINSSPYEDGWMIKVKPSSPAELDSLMGSKEYTKFCEEEDAH 24
KLSETPGLINSSPYEDGWMIKVKPSSP+ELD+L+ +YTK CEEEDAH
Sbjct: 116 KLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDAH 164