BLASTX nr result
ID: Dioscorea21_contig00010316
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00010316
(852 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246... 176 5e-60
ref|XP_002466458.1| hypothetical protein SORBIDRAFT_01g008070 [S... 167 2e-58
gb|ACR37810.1| unknown [Zea mays] gi|413933074|gb|AFW67625.1| pu... 166 4e-58
ref|XP_002319148.1| predicted protein [Populus trichocarpa] gi|2... 174 1e-57
ref|XP_002325850.1| predicted protein [Populus trichocarpa] gi|2... 170 3e-57
>ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246079 [Vitis vinifera]
gi|296089289|emb|CBI39061.3| unnamed protein product
[Vitis vinifera]
Length = 268
Score = 176 bits (447), Expect(2) = 5e-60
Identities = 88/122 (72%), Positives = 109/122 (89%)
Frame = -3
Query: 832 DVNCLPSTELQSSSSGGGRIYVSKAQEVVSGVLAKGSALGQDAMNRARAFDEKHQLRANA 653
D + P+ E +++S GR+YV+KAQ+VV+ +LAKGSA+GQDAMN+A+AFDEKHQL A+A
Sbjct: 99 DGDVSPNAEGKATSPNNGRVYVNKAQDVVTSMLAKGSAIGQDAMNKAKAFDEKHQLTASA 158
Query: 652 SARAISFDRRVGLSEKITVGFSVVNEKVKSVDQKLHVSDKTMAALIVAERKLNDTGSAVK 473
SA+ ISFDRRVGL+EK+TVG SVVNEKVKSVDQ+LHVSDKTMAAL+ AERKLN+TGSAVK
Sbjct: 159 SAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAALLAAERKLNNTGSAVK 218
Query: 472 TN 467
T+
Sbjct: 219 TS 220
Score = 81.6 bits (200), Expect(2) = 5e-60
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = -2
Query: 404 RYVTAGTAWLNGAFSKMAKAGHVAGTRTREKFQLAVSNLTAKDPVI 267
RYVTAGT WLNGAF+K+AKAG +AGT+TREKF LAVSNLTAKDP I
Sbjct: 221 RYVTAGTTWLNGAFTKVAKAGQIAGTKTREKFHLAVSNLTAKDPSI 266
>ref|XP_002466458.1| hypothetical protein SORBIDRAFT_01g008070 [Sorghum bicolor]
gi|241920312|gb|EER93456.1| hypothetical protein
SORBIDRAFT_01g008070 [Sorghum bicolor]
Length = 276
Score = 167 bits (422), Expect(2) = 2e-58
Identities = 88/127 (69%), Positives = 104/127 (81%)
Frame = -3
Query: 847 TSDSSDVNCLPSTELQSSSSGGGRIYVSKAQEVVSGVLAKGSALGQDAMNRARAFDEKHQ 668
TS SS N ++++S R+YVSKA +V++ V+AKGSA+ QDA+N+A+AFDEKHQ
Sbjct: 102 TSTSSAPNAELEYSSEANTSPNSRVYVSKAHDVMTNVIAKGSAMRQDAVNKAKAFDEKHQ 161
Query: 667 LRANASARAISFDRRVGLSEKITVGFSVVNEKVKSVDQKLHVSDKTMAALIVAERKLNDT 488
LRANASAR SFD+RVGLSEKI G SVVNEKVKSVDQ+L VSDKTMAAL+ AERKLNDT
Sbjct: 162 LRANASARINSFDKRVGLSEKINNGLSVVNEKVKSVDQRLQVSDKTMAALLAAERKLNDT 221
Query: 487 GSAVKTN 467
GSAVKTN
Sbjct: 222 GSAVKTN 228
Score = 85.9 bits (211), Expect(2) = 2e-58
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = -2
Query: 404 RYVTAGTAWLNGAFSKMAKAGHVAGTRTREKFQLAVSNLTAKDPVIAA 261
RYV+AGT+WLNGAFSK+AKAGHVAG+RTREKFQLAVSNLTAK P + A
Sbjct: 229 RYVSAGTSWLNGAFSKVAKAGHVAGSRTREKFQLAVSNLTAKGPAVVA 276
>gb|ACR37810.1| unknown [Zea mays] gi|413933074|gb|AFW67625.1| putative RNA
recognition motif containing family protein [Zea mays]
Length = 276
Score = 166 bits (419), Expect(2) = 4e-58
Identities = 87/127 (68%), Positives = 103/127 (81%)
Frame = -3
Query: 847 TSDSSDVNCLPSTELQSSSSGGGRIYVSKAQEVVSGVLAKGSALGQDAMNRARAFDEKHQ 668
TS SS N +++ S R+YVSKA +V++ V+AKGSA+ QDA+N+A+AFDEKHQ
Sbjct: 102 TSRSSASNAELEYSSEANVSPNSRVYVSKAHDVMTNVIAKGSAMRQDAVNKAKAFDEKHQ 161
Query: 667 LRANASARAISFDRRVGLSEKITVGFSVVNEKVKSVDQKLHVSDKTMAALIVAERKLNDT 488
RANASAR SFD+RVGLSEKI G SVVNE+VKSVDQ+LHVSDKTMAAL+ AERKLNDT
Sbjct: 162 FRANASARINSFDKRVGLSEKINNGISVVNERVKSVDQRLHVSDKTMAALLAAERKLNDT 221
Query: 487 GSAVKTN 467
GSAVKTN
Sbjct: 222 GSAVKTN 228
Score = 85.9 bits (211), Expect(2) = 4e-58
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = -2
Query: 404 RYVTAGTAWLNGAFSKMAKAGHVAGTRTREKFQLAVSNLTAKDPVIAA 261
RYV+AGT+WLNGAFSK+AKAGHVAG+RTREKFQLAVSNLTAK P + A
Sbjct: 229 RYVSAGTSWLNGAFSKVAKAGHVAGSRTREKFQLAVSNLTAKGPAVVA 276
>ref|XP_002319148.1| predicted protein [Populus trichocarpa] gi|222857524|gb|EEE95071.1|
predicted protein [Populus trichocarpa]
Length = 269
Score = 174 bits (442), Expect(2) = 1e-57
Identities = 86/116 (74%), Positives = 105/116 (90%)
Frame = -3
Query: 814 STELQSSSSGGGRIYVSKAQEVVSGVLAKGSALGQDAMNRARAFDEKHQLRANASARAIS 635
+ E ++S SG GR+YVS+AQEVV+ +LAKGSA+GQDAMN+A+AFDEKH+L ANAS + IS
Sbjct: 106 NVEGKTSPSGSGRVYVSRAQEVVTSMLAKGSAIGQDAMNKAKAFDEKHRLSANASEKVIS 165
Query: 634 FDRRVGLSEKITVGFSVVNEKVKSVDQKLHVSDKTMAALIVAERKLNDTGSAVKTN 467
FDRRVGL+EK+TVG SVVNEKVKSVDQ+LHVSDKTMAA+ AERK+NDTGSAVK++
Sbjct: 166 FDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAAIFAAERKINDTGSAVKSS 221
Score = 75.5 bits (184), Expect(2) = 1e-57
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = -2
Query: 404 RYVTAGTAWLNGAFSKMAKAGHVAGTRTREKFQLAVSNLTAKDPVIA 264
RYV+AGTAWLNGAFSK+AKAG VAGT+TR KF AVSNLTAK+ IA
Sbjct: 222 RYVSAGTAWLNGAFSKVAKAGQVAGTKTRAKFNSAVSNLTAKESPIA 268
>ref|XP_002325850.1| predicted protein [Populus trichocarpa] gi|222862725|gb|EEF00232.1|
predicted protein [Populus trichocarpa]
Length = 274
Score = 170 bits (430), Expect(2) = 3e-57
Identities = 84/116 (72%), Positives = 103/116 (88%)
Frame = -3
Query: 814 STELQSSSSGGGRIYVSKAQEVVSGVLAKGSALGQDAMNRARAFDEKHQLRANASARAIS 635
+ E ++S SG GR+YVS+AQEVV+ VLAKGSA+ QDAMN+A+AFDEKH+L A+AS + S
Sbjct: 111 NVEGKTSPSGSGRVYVSRAQEVVTSVLAKGSAISQDAMNKAKAFDEKHRLSASASEKVTS 170
Query: 634 FDRRVGLSEKITVGFSVVNEKVKSVDQKLHVSDKTMAALIVAERKLNDTGSAVKTN 467
FDRRVGL+EK+T+G SVVNEKVKSVDQ+LHVSDKTMAA+ AERKLNDTGSAVK++
Sbjct: 171 FDRRVGLTEKLTIGISVVNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKSS 226
Score = 79.0 bits (193), Expect(2) = 3e-57
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = -2
Query: 404 RYVTAGTAWLNGAFSKMAKAGHVAGTRTREKFQLAVSNLTAKDPVIA 264
RYV+AGTAWLNGAFSK+A+AG VAGT+TREKF LAVSNLTAK+ IA
Sbjct: 227 RYVSAGTAWLNGAFSKVARAGQVAGTKTREKFNLAVSNLTAKESPIA 273