BLASTX nr result

ID: Dioscorea21_contig00010309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010309
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001054151.1| Os04g0661800 [Oryza sativa Japonica Group] g...   225   9e-57
ref|XP_002531587.1| Cofactor required for Sp1 transcriptional ac...   223   6e-56
ref|XP_003580745.1| PREDICTED: putative mediator of RNA polymera...   221   2e-55
dbj|BAJ93932.1| predicted protein [Hordeum vulgare subsp. vulgar...   219   8e-55
ref|XP_002323352.1| predicted protein [Populus trichocarpa] gi|2...   217   3e-54

>ref|NP_001054151.1| Os04g0661800 [Oryza sativa Japonica Group]
           gi|32489035|emb|CAE04832.1| OSJNBa0084K01.4 [Oryza
           sativa Japonica Group] gi|113565722|dbj|BAF16065.1|
           Os04g0661800 [Oryza sativa Japonica Group]
           gi|116310047|emb|CAH67070.1| H0112G12.15 [Oryza sativa
           Indica Group] gi|125550095|gb|EAY95917.1| hypothetical
           protein OsI_17783 [Oryza sativa Indica Group]
           gi|215769017|dbj|BAH01246.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222629714|gb|EEE61846.1| hypothetical protein
           OsJ_16504 [Oryza sativa Japonica Group]
          Length = 176

 Score =  225 bits (574), Expect = 9e-57
 Identities = 115/158 (72%), Positives = 127/158 (80%)
 Frame = +2

Query: 116 YRLYKDYIDDXXXXXXXXXXXXXXXXXXGQHFAIDLVLPSLEDQGVRQLYPKSPIIDFKK 295
           YRLYKDY  D                  G  +  D+VLPSLEDQGVRQLYPKSP IDFKK
Sbjct: 14  YRLYKDYEKDPSSAPEPPPPVDGPYQLFGATYTTDVVLPSLEDQGVRQLYPKSPDIDFKK 73

Query: 296 ELTSLNRELQLHILELADVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHI 475
           EL +LNRELQLHILELAD+LVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIH+
Sbjct: 74  ELRTLNRELQLHILELADILVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHM 133

Query: 476 LERQIQRRKEAVDDVKRRRAEAQRLLKESLLVLDGQLP 589
           LE QIQRRK+A++D+K+RR EAQ+LL ESLL+LDG  P
Sbjct: 134 LENQIQRRKQAIEDIKQRREEAQKLLGESLLILDGNQP 171


>ref|XP_002531587.1| Cofactor required for Sp1 transcriptional activation subunit,
           putative [Ricinus communis] gi|223528783|gb|EEF30790.1|
           Cofactor required for Sp1 transcriptional activation
           subunit, putative [Ricinus communis]
          Length = 168

 Score =  223 bits (567), Expect = 6e-56
 Identities = 114/156 (73%), Positives = 127/156 (81%)
 Frame = +2

Query: 116 YRLYKDYIDDXXXXXXXXXXXXXXXXXXGQHFAIDLVLPSLEDQGVRQLYPKSPIIDFKK 295
           YRLYKDYI++                  G ++  + VLPSLE+QGVRQLYPK P +DFKK
Sbjct: 13  YRLYKDYIENPKSAPEPPPPIDGTYTCFGANYTTEYVLPSLEEQGVRQLYPKGPNVDFKK 72

Query: 296 ELTSLNRELQLHILELADVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHI 475
           EL SLNRELQLHILEL+DVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHI
Sbjct: 73  ELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHI 132

Query: 476 LERQIQRRKEAVDDVKRRRAEAQRLLKESLLVLDGQ 583
           LE QIQRRK+AV+D+KRRR EAQ+LLKE+L  LDGQ
Sbjct: 133 LELQIQRRKQAVEDIKRRREEAQKLLKEALGTLDGQ 168


>ref|XP_003580745.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 7-like [Brachypodium distachyon]
          Length = 176

 Score =  221 bits (562), Expect = 2e-55
 Identities = 112/155 (72%), Positives = 125/155 (80%)
 Frame = +2

Query: 116 YRLYKDYIDDXXXXXXXXXXXXXXXXXXGQHFAIDLVLPSLEDQGVRQLYPKSPIIDFKK 295
           YRLYKD+  D                  G  +  D+VLPSLEDQGVRQLYPK P IDFKK
Sbjct: 14  YRLYKDFEKDPSSAPEPPPPIDGAYQLFGATYTTDVVLPSLEDQGVRQLYPKGPDIDFKK 73

Query: 296 ELTSLNRELQLHILELADVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHI 475
           EL +LNRELQLHILELAD+LVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIH+
Sbjct: 74  ELRTLNRELQLHILELADILVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHL 133

Query: 476 LERQIQRRKEAVDDVKRRRAEAQRLLKESLLVLDG 580
           LE QIQRRK+A++D+K+RR EAQRLL ESLL++DG
Sbjct: 134 LESQIQRRKQAIEDIKQRREEAQRLLGESLLIIDG 168


>dbj|BAJ93932.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326496443|dbj|BAJ94683.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 179

 Score =  219 bits (557), Expect = 8e-55
 Identities = 110/155 (70%), Positives = 125/155 (80%)
 Frame = +2

Query: 116 YRLYKDYIDDXXXXXXXXXXXXXXXXXXGQHFAIDLVLPSLEDQGVRQLYPKSPIIDFKK 295
           YRLYKD+  D                  G  +  D+VLPSLEDQGVRQLYPK P IDFKK
Sbjct: 16  YRLYKDFEQDPSSAPEPPPPIEGSYQLFGATYTTDVVLPSLEDQGVRQLYPKGPDIDFKK 75

Query: 296 ELTSLNRELQLHILELADVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHI 475
           EL +LNRELQLHILELAD+LVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIH+
Sbjct: 76  ELRTLNRELQLHILELADILVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHL 135

Query: 476 LERQIQRRKEAVDDVKRRRAEAQRLLKESLLVLDG 580
           LE QIQRRK+A++D+K+RR EAQRLL ESL++++G
Sbjct: 136 LESQIQRRKQAIEDIKQRREEAQRLLGESLIIIEG 170


>ref|XP_002323352.1| predicted protein [Populus trichocarpa] gi|222867982|gb|EEF05113.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  217 bits (552), Expect = 3e-54
 Identities = 113/156 (72%), Positives = 124/156 (79%)
 Frame = +2

Query: 116 YRLYKDYIDDXXXXXXXXXXXXXXXXXXGQHFAIDLVLPSLEDQGVRQLYPKSPIIDFKK 295
           YRLYKDYI++                     +  D VLPSLE+QGVRQLYPK P +DFKK
Sbjct: 13  YRLYKDYIENPKSAPEPPPPIEGTYVCFASSYTTDDVLPSLEEQGVRQLYPKGPNVDFKK 72

Query: 296 ELTSLNRELQLHILELADVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHI 475
           EL SLNRELQLHILELADVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHI
Sbjct: 73  ELRSLNRELQLHILELADVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHI 132

Query: 476 LERQIQRRKEAVDDVKRRRAEAQRLLKESLLVLDGQ 583
           LE QIQRRK+AV+D+KR+R EAQ+LLKE+L  L GQ
Sbjct: 133 LELQIQRRKQAVEDIKRQREEAQKLLKEALGTLAGQ 168


Top