BLASTX nr result
ID: Dioscorea21_contig00010299
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00010299 (731 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312218.1| predicted protein [Populus trichocarpa] gi|2... 202 7e-50 ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II tra... 202 7e-50 ref|XP_004145443.1| PREDICTED: mediator of RNA polymerase II tra... 199 6e-49 ref|XP_003546670.1| PREDICTED: putative mediator of RNA polymera... 194 2e-47 ref|XP_003595880.1| Mediator of RNA polymerase II transcription ... 194 2e-47 >ref|XP_002312218.1| predicted protein [Populus trichocarpa] gi|222852038|gb|EEE89585.1| predicted protein [Populus trichocarpa] Length = 158 Score = 202 bits (513), Expect = 7e-50 Identities = 106/130 (81%), Positives = 116/130 (89%) Frame = +3 Query: 72 QKQKALLQRVDGDIANIVDNFSLLVNVARVSEPPVRNSQEAFQMEMRAARMVQAADSLLK 251 QKQKAL+QRV+ DIA+IVDNF+ LVNVAR+++ PVRNSQEAF MEMRAARMVQAADSLLK Sbjct: 29 QKQKALMQRVETDIAHIVDNFTHLVNVARINDTPVRNSQEAFMMEMRAARMVQAADSLLK 88 Query: 252 LVSELKQTAIFSGFASLNEHVDRRIVEFEQQAEKTDRMLERIGEQAAASLKELETHYYSS 431 LVSELKQTAIFSGFASLN+HVD+RI EF Q AEKTD ML RIGE+AAASLKELETHYYSS Sbjct: 89 LVSELKQTAIFSGFASLNDHVDQRIGEFTQLAEKTDSMLARIGEEAAASLKELETHYYSS 148 Query: 432 VLRTGHTEEP 461 RT T EP Sbjct: 149 AQRTSQTLEP 158 >ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II transcription subunit 22 [Vitis vinifera] gi|297736089|emb|CBI24127.3| unnamed protein product [Vitis vinifera] Length = 150 Score = 202 bits (513), Expect = 7e-50 Identities = 103/130 (79%), Positives = 115/130 (88%) Frame = +3 Query: 72 QKQKALLQRVDGDIANIVDNFSLLVNVARVSEPPVRNSQEAFQMEMRAARMVQAADSLLK 251 QKQK LLQRV+ DIAN+VD+F+ LVNVARV++PPVRNSQEAF MEMRAARMVQAADSLLK Sbjct: 21 QKQKTLLQRVETDIANVVDHFTFLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLK 80 Query: 252 LVSELKQTAIFSGFASLNEHVDRRIVEFEQQAEKTDRMLERIGEQAAASLKELETHYYSS 431 LVSELKQTAIFSGFASLN+HVD+R EF QQAEKTD +L RIGE+AAASLKELE+HYYSS Sbjct: 81 LVSELKQTAIFSGFASLNDHVDQREAEFNQQAEKTDHLLARIGEEAAASLKELESHYYSS 140 Query: 432 VLRTGHTEEP 461 RT +P Sbjct: 141 AQRTSEPPQP 150 >ref|XP_004145443.1| PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like [Cucumis sativus] gi|449527521|ref|XP_004170759.1| PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like [Cucumis sativus] Length = 150 Score = 199 bits (505), Expect = 6e-49 Identities = 101/124 (81%), Positives = 116/124 (93%) Frame = +3 Query: 72 QKQKALLQRVDGDIANIVDNFSLLVNVARVSEPPVRNSQEAFQMEMRAARMVQAADSLLK 251 QKQK LLQRV+ DIANIVDNF+ LVNV+RV++PPVRNSQE+F MEMRAARMVQAADSLLK Sbjct: 21 QKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLK 80 Query: 252 LVSELKQTAIFSGFASLNEHVDRRIVEFEQQAEKTDRMLERIGEQAAASLKELETHYYSS 431 LVSELKQTAIFSGFASLN+HV++RIVEF QQA++TDR+L RIGE+AAA+LKELE+HYYSS Sbjct: 81 LVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLSRIGEEAAANLKELESHYYSS 140 Query: 432 VLRT 443 RT Sbjct: 141 TQRT 144 >ref|XP_003546670.1| PREDICTED: putative mediator of RNA polymerase II transcription subunit 22-like [Glycine max] Length = 156 Score = 194 bits (493), Expect = 2e-47 Identities = 101/130 (77%), Positives = 113/130 (86%) Frame = +3 Query: 72 QKQKALLQRVDGDIANIVDNFSLLVNVARVSEPPVRNSQEAFQMEMRAARMVQAADSLLK 251 QKQK LLQRV+GDIANIVDNF+ LVNVARV++PPVRNSQEAF MEMRAARMVQAADSLLK Sbjct: 27 QKQKTLLQRVEGDIANIVDNFNHLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLK 86 Query: 252 LVSELKQTAIFSGFASLNEHVDRRIVEFEQQAEKTDRMLERIGEQAAASLKELETHYYSS 431 LVSELKQTAIFSGFASLN+HV+ R +EF Q AEKTDR L R+GE+AAASLK LE+HY SS Sbjct: 87 LVSELKQTAIFSGFASLNDHVEERRIEFNQLAEKTDRTLSRVGEEAAASLKGLESHYSSS 146 Query: 432 VLRTGHTEEP 461 V + +P Sbjct: 147 VQKIIQNPQP 156 >ref|XP_003595880.1| Mediator of RNA polymerase II transcription subunit [Medicago truncatula] gi|355484928|gb|AES66131.1| Mediator of RNA polymerase II transcription subunit [Medicago truncatula] Length = 150 Score = 194 bits (492), Expect = 2e-47 Identities = 102/130 (78%), Positives = 113/130 (86%) Frame = +3 Query: 72 QKQKALLQRVDGDIANIVDNFSLLVNVARVSEPPVRNSQEAFQMEMRAARMVQAADSLLK 251 QKQK LLQRV+GDIANIVDNFS LVNVARV++PPVRNSQEAF MEMRAARMVQAADSLLK Sbjct: 21 QKQKTLLQRVEGDIANIVDNFSHLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLK 80 Query: 252 LVSELKQTAIFSGFASLNEHVDRRIVEFEQQAEKTDRMLERIGEQAAASLKELETHYYSS 431 LVSELKQTAIFSGFASLN+HV++R +EF Q AEKTD L IGE+AAASLKELE+HY SS Sbjct: 81 LVSELKQTAIFSGFASLNDHVEQRRLEFNQLAEKTDHTLSTIGEEAAASLKELESHYSSS 140 Query: 432 VLRTGHTEEP 461 +T +P Sbjct: 141 AQKTIQDVQP 150