BLASTX nr result

ID: Dioscorea21_contig00010299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010299
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312218.1| predicted protein [Populus trichocarpa] gi|2...   202   7e-50
ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II tra...   202   7e-50
ref|XP_004145443.1| PREDICTED: mediator of RNA polymerase II tra...   199   6e-49
ref|XP_003546670.1| PREDICTED: putative mediator of RNA polymera...   194   2e-47
ref|XP_003595880.1| Mediator of RNA polymerase II transcription ...   194   2e-47

>ref|XP_002312218.1| predicted protein [Populus trichocarpa] gi|222852038|gb|EEE89585.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  202 bits (513), Expect = 7e-50
 Identities = 106/130 (81%), Positives = 116/130 (89%)
 Frame = +3

Query: 72  QKQKALLQRVDGDIANIVDNFSLLVNVARVSEPPVRNSQEAFQMEMRAARMVQAADSLLK 251
           QKQKAL+QRV+ DIA+IVDNF+ LVNVAR+++ PVRNSQEAF MEMRAARMVQAADSLLK
Sbjct: 29  QKQKALMQRVETDIAHIVDNFTHLVNVARINDTPVRNSQEAFMMEMRAARMVQAADSLLK 88

Query: 252 LVSELKQTAIFSGFASLNEHVDRRIVEFEQQAEKTDRMLERIGEQAAASLKELETHYYSS 431
           LVSELKQTAIFSGFASLN+HVD+RI EF Q AEKTD ML RIGE+AAASLKELETHYYSS
Sbjct: 89  LVSELKQTAIFSGFASLNDHVDQRIGEFTQLAEKTDSMLARIGEEAAASLKELETHYYSS 148

Query: 432 VLRTGHTEEP 461
             RT  T EP
Sbjct: 149 AQRTSQTLEP 158


>ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II transcription subunit 22
           [Vitis vinifera] gi|297736089|emb|CBI24127.3| unnamed
           protein product [Vitis vinifera]
          Length = 150

 Score =  202 bits (513), Expect = 7e-50
 Identities = 103/130 (79%), Positives = 115/130 (88%)
 Frame = +3

Query: 72  QKQKALLQRVDGDIANIVDNFSLLVNVARVSEPPVRNSQEAFQMEMRAARMVQAADSLLK 251
           QKQK LLQRV+ DIAN+VD+F+ LVNVARV++PPVRNSQEAF MEMRAARMVQAADSLLK
Sbjct: 21  QKQKTLLQRVETDIANVVDHFTFLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLK 80

Query: 252 LVSELKQTAIFSGFASLNEHVDRRIVEFEQQAEKTDRMLERIGEQAAASLKELETHYYSS 431
           LVSELKQTAIFSGFASLN+HVD+R  EF QQAEKTD +L RIGE+AAASLKELE+HYYSS
Sbjct: 81  LVSELKQTAIFSGFASLNDHVDQREAEFNQQAEKTDHLLARIGEEAAASLKELESHYYSS 140

Query: 432 VLRTGHTEEP 461
             RT    +P
Sbjct: 141 AQRTSEPPQP 150


>ref|XP_004145443.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           22b-like [Cucumis sativus]
           gi|449527521|ref|XP_004170759.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 22b-like
           [Cucumis sativus]
          Length = 150

 Score =  199 bits (505), Expect = 6e-49
 Identities = 101/124 (81%), Positives = 116/124 (93%)
 Frame = +3

Query: 72  QKQKALLQRVDGDIANIVDNFSLLVNVARVSEPPVRNSQEAFQMEMRAARMVQAADSLLK 251
           QKQK LLQRV+ DIANIVDNF+ LVNV+RV++PPVRNSQE+F MEMRAARMVQAADSLLK
Sbjct: 21  QKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLK 80

Query: 252 LVSELKQTAIFSGFASLNEHVDRRIVEFEQQAEKTDRMLERIGEQAAASLKELETHYYSS 431
           LVSELKQTAIFSGFASLN+HV++RIVEF QQA++TDR+L RIGE+AAA+LKELE+HYYSS
Sbjct: 81  LVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLSRIGEEAAANLKELESHYYSS 140

Query: 432 VLRT 443
             RT
Sbjct: 141 TQRT 144


>ref|XP_003546670.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 22-like [Glycine max]
          Length = 156

 Score =  194 bits (493), Expect = 2e-47
 Identities = 101/130 (77%), Positives = 113/130 (86%)
 Frame = +3

Query: 72  QKQKALLQRVDGDIANIVDNFSLLVNVARVSEPPVRNSQEAFQMEMRAARMVQAADSLLK 251
           QKQK LLQRV+GDIANIVDNF+ LVNVARV++PPVRNSQEAF MEMRAARMVQAADSLLK
Sbjct: 27  QKQKTLLQRVEGDIANIVDNFNHLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLK 86

Query: 252 LVSELKQTAIFSGFASLNEHVDRRIVEFEQQAEKTDRMLERIGEQAAASLKELETHYYSS 431
           LVSELKQTAIFSGFASLN+HV+ R +EF Q AEKTDR L R+GE+AAASLK LE+HY SS
Sbjct: 87  LVSELKQTAIFSGFASLNDHVEERRIEFNQLAEKTDRTLSRVGEEAAASLKGLESHYSSS 146

Query: 432 VLRTGHTEEP 461
           V +     +P
Sbjct: 147 VQKIIQNPQP 156


>ref|XP_003595880.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355484928|gb|AES66131.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 150

 Score =  194 bits (492), Expect = 2e-47
 Identities = 102/130 (78%), Positives = 113/130 (86%)
 Frame = +3

Query: 72  QKQKALLQRVDGDIANIVDNFSLLVNVARVSEPPVRNSQEAFQMEMRAARMVQAADSLLK 251
           QKQK LLQRV+GDIANIVDNFS LVNVARV++PPVRNSQEAF MEMRAARMVQAADSLLK
Sbjct: 21  QKQKTLLQRVEGDIANIVDNFSHLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLK 80

Query: 252 LVSELKQTAIFSGFASLNEHVDRRIVEFEQQAEKTDRMLERIGEQAAASLKELETHYYSS 431
           LVSELKQTAIFSGFASLN+HV++R +EF Q AEKTD  L  IGE+AAASLKELE+HY SS
Sbjct: 81  LVSELKQTAIFSGFASLNDHVEQRRLEFNQLAEKTDHTLSTIGEEAAASLKELESHYSSS 140

Query: 432 VLRTGHTEEP 461
             +T    +P
Sbjct: 141 AQKTIQDVQP 150


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