BLASTX nr result

ID: Dioscorea21_contig00010290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010290
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vi...   315   2e-84
emb|CBI34603.3| unnamed protein product [Vitis vinifera]              315   2e-84
dbj|BAD33090.1| putative RNA-binding protein RBP37 [Oryza sativa...   314   5e-84
dbj|BAD33089.1| putative RNA-binding protein RBP37 [Oryza sativa...   314   5e-84
gb|EEC82815.1| hypothetical protein OsI_27601 [Oryza sativa Indi...   314   5e-84

>ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
          Length = 398

 Score =  315 bits (807), Expect = 2e-84
 Identities = 152/166 (91%), Positives = 161/166 (96%)
 Frame = -2

Query: 499 RTVYVSDIDHQVTEEQLAALFINCGNVVDCRICGDPNSVLRFAFIEFTDEEGARAALSLA 320
           RTVYVSDID QVTEE+LAALFI CG VVDCR+CGDPNSVLRFAF+EFTDEEGARAALSLA
Sbjct: 213 RTVYVSDIDQQVTEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLA 272

Query: 319 GTMLGYYPVRVLPSKTAIAPVNPTFLPKSEDEREMCTRTIYCTNIDKKVSQSDLKLFFES 140
           GTMLGYYPVRVLPSKTAIAPVNPTFLP++EDEREMC RTIYCTNIDKKVSQ+D+KLFFES
Sbjct: 273 GTMLGYYPVRVLPSKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFES 332

Query: 139 ICGEVYRLRLLGDYHHSTRIAFVEFAMADSAIAALNCSGVVLGSLP 2
           +CGEVYRLRLLGDYHHSTRIAFVEF MA+SAIAALNCSGVVLGSLP
Sbjct: 333 VCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIAALNCSGVVLGSLP 378



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = -2

Query: 499 RTVYVSDIDHQVTEEQLAALFIN-CGNVVDCRICGDPNSVLRFAFIEFTDEEGARAALSL 323
           RT+Y ++ID +V++  +   F + CG V   R+ GD +   R AF+EF   E A AAL+ 
Sbjct: 310 RTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIAALNC 369

Query: 322 AGTMLGYYPVRVLPSKTAIAPVNP 251
           +G +LG  P+RV PSKT + P  P
Sbjct: 370 SGVVLGSLPIRVSPSKTPVRPRAP 393


>emb|CBI34603.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  315 bits (807), Expect = 2e-84
 Identities = 152/166 (91%), Positives = 161/166 (96%)
 Frame = -2

Query: 499 RTVYVSDIDHQVTEEQLAALFINCGNVVDCRICGDPNSVLRFAFIEFTDEEGARAALSLA 320
           RTVYVSDID QVTEE+LAALFI CG VVDCR+CGDPNSVLRFAF+EFTDEEGARAALSLA
Sbjct: 212 RTVYVSDIDQQVTEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLA 271

Query: 319 GTMLGYYPVRVLPSKTAIAPVNPTFLPKSEDEREMCTRTIYCTNIDKKVSQSDLKLFFES 140
           GTMLGYYPVRVLPSKTAIAPVNPTFLP++EDEREMC RTIYCTNIDKKVSQ+D+KLFFES
Sbjct: 272 GTMLGYYPVRVLPSKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFES 331

Query: 139 ICGEVYRLRLLGDYHHSTRIAFVEFAMADSAIAALNCSGVVLGSLP 2
           +CGEVYRLRLLGDYHHSTRIAFVEF MA+SAIAALNCSGVVLGSLP
Sbjct: 332 VCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIAALNCSGVVLGSLP 377



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = -2

Query: 499 RTVYVSDIDHQVTEEQLAALFIN-CGNVVDCRICGDPNSVLRFAFIEFTDEEGARAALSL 323
           RT+Y ++ID +V++  +   F + CG V   R+ GD +   R AF+EF   E A AAL+ 
Sbjct: 309 RTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIAALNC 368

Query: 322 AGTMLGYYPVRVLPSKTAIAPVNP 251
           +G +LG  P+RV PSKT + P  P
Sbjct: 369 SGVVLGSLPIRVSPSKTPVRPRAP 392


>dbj|BAD33090.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
          Length = 201

 Score =  314 bits (804), Expect = 5e-84
 Identities = 151/166 (90%), Positives = 161/166 (96%)
 Frame = -2

Query: 499 RTVYVSDIDHQVTEEQLAALFINCGNVVDCRICGDPNSVLRFAFIEFTDEEGARAALSLA 320
           RTVYVSDIDHQVTEEQLAALFINCG VVDCR+CGDPNSVLRFAFIEFTDEE ARAAL+L+
Sbjct: 16  RTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEESARAALNLS 75

Query: 319 GTMLGYYPVRVLPSKTAIAPVNPTFLPKSEDEREMCTRTIYCTNIDKKVSQSDLKLFFES 140
           GT+LGYYPVRVLPSKTAIAPVNPTFLP+S+DEREMC RTIYCTNIDKKVSQ+D+KLFFES
Sbjct: 76  GTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFES 135

Query: 139 ICGEVYRLRLLGDYHHSTRIAFVEFAMADSAIAALNCSGVVLGSLP 2
           ICGEVYRLRLLGDYHHSTRIAFVEF MA+SA AALNCSGV+LGSLP
Sbjct: 136 ICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLP 181



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = -2

Query: 499 RTVYVSDIDHQVTEEQLAALFIN-CGNVVDCRICGDPNSVLRFAFIEFTDEEGARAALSL 323
           RT+Y ++ID +V++  +   F + CG V   R+ GD +   R AF+EF   E A AAL+ 
Sbjct: 113 RTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNC 172

Query: 322 AGTMLGYYPVRVLPSKTAIAPVNP 251
           +G +LG  P+RV PSKT + P  P
Sbjct: 173 SGVILGSLPIRVSPSKTPVRPRAP 196


>dbj|BAD33089.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
           gi|182375457|dbj|BAG24017.1| RNA-binding protein [Oryza
           sativa Japonica Group] gi|215736921|dbj|BAG95850.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222639804|gb|EEE67936.1| hypothetical protein
           OsJ_25822 [Oryza sativa Japonica Group]
          Length = 302

 Score =  314 bits (804), Expect = 5e-84
 Identities = 151/166 (90%), Positives = 161/166 (96%)
 Frame = -2

Query: 499 RTVYVSDIDHQVTEEQLAALFINCGNVVDCRICGDPNSVLRFAFIEFTDEEGARAALSLA 320
           RTVYVSDIDHQVTEEQLAALFINCG VVDCR+CGDPNSVLRFAFIEFTDEE ARAAL+L+
Sbjct: 117 RTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEESARAALNLS 176

Query: 319 GTMLGYYPVRVLPSKTAIAPVNPTFLPKSEDEREMCTRTIYCTNIDKKVSQSDLKLFFES 140
           GT+LGYYPVRVLPSKTAIAPVNPTFLP+S+DEREMC RTIYCTNIDKKVSQ+D+KLFFES
Sbjct: 177 GTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFES 236

Query: 139 ICGEVYRLRLLGDYHHSTRIAFVEFAMADSAIAALNCSGVVLGSLP 2
           ICGEVYRLRLLGDYHHSTRIAFVEF MA+SA AALNCSGV+LGSLP
Sbjct: 237 ICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLP 282



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = -2

Query: 499 RTVYVSDIDHQVTEEQLAALFIN-CGNVVDCRICGDPNSVLRFAFIEFTDEEGARAALSL 323
           RT+Y ++ID +V++  +   F + CG V   R+ GD +   R AF+EF   E A AAL+ 
Sbjct: 214 RTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNC 273

Query: 322 AGTMLGYYPVRVLPSKTAIAPVNP 251
           +G +LG  P+RV PSKT + P  P
Sbjct: 274 SGVILGSLPIRVSPSKTPVRPRAP 297


>gb|EEC82815.1| hypothetical protein OsI_27601 [Oryza sativa Indica Group]
          Length = 277

 Score =  314 bits (804), Expect = 5e-84
 Identities = 151/166 (90%), Positives = 161/166 (96%)
 Frame = -2

Query: 499 RTVYVSDIDHQVTEEQLAALFINCGNVVDCRICGDPNSVLRFAFIEFTDEEGARAALSLA 320
           RTVYVSDIDHQVTEEQLAALFINCG VVDCR+CGDPNSVLRFAFIEFTDEE ARAAL+L+
Sbjct: 92  RTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEESARAALNLS 151

Query: 319 GTMLGYYPVRVLPSKTAIAPVNPTFLPKSEDEREMCTRTIYCTNIDKKVSQSDLKLFFES 140
           GT+LGYYPVRVLPSKTAIAPVNPTFLP+S+DEREMC RTIYCTNIDKKVSQ+D+KLFFES
Sbjct: 152 GTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFES 211

Query: 139 ICGEVYRLRLLGDYHHSTRIAFVEFAMADSAIAALNCSGVVLGSLP 2
           ICGEVYRLRLLGDYHHSTRIAFVEF MA+SA AALNCSGV+LGSLP
Sbjct: 212 ICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLP 257



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = -2

Query: 499 RTVYVSDIDHQVTEEQLAALFIN-CGNVVDCRICGDPNSVLRFAFIEFTDEEGARAALSL 323
           RT+Y ++ID +V++  +   F + CG V   R+ GD +   R AF+EF   E A AAL+ 
Sbjct: 189 RTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNC 248

Query: 322 AGTMLGYYPVRVLPSKTAIAPVNP 251
           +G +LG  P+RV PSKT + P  P
Sbjct: 249 SGVILGSLPIRVSPSKTPVRPRAP 272


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