BLASTX nr result

ID: Dioscorea21_contig00010257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010257
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE60066.1| hypothetical protein OsJ_12878 [Oryza sativa Japo...    70   5e-10
gb|ABF99255.1| expressed protein [Oryza sativa Japonica Group]         70   5e-10
ref|NP_001051501.1| Os03g0788300 [Oryza sativa Japonica Group] g...    70   5e-10
ref|XP_002514439.1| conserved hypothetical protein [Ricinus comm...    70   8e-10
gb|EEC76301.1| hypothetical protein OsI_13821 [Oryza sativa Indi...    69   2e-09

>gb|EEE60066.1| hypothetical protein OsJ_12878 [Oryza sativa Japonica Group]
          Length = 490

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 46/94 (48%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
 Frame = +1

Query: 607 QPSFGVS-AVPSFGSGFPQNDQMNVEDSMTDDAVQPTVSTVP-----TFGQPANSQTPPS 768
           QP+FG++ A  SFG G P NDQMNVEDSM DD  Q   +  P      FGQPA+S   P 
Sbjct: 364 QPAFGMTNANTSFGMGSPGNDQMNVEDSMADDTNQAAPAPAPIFGSSPFGQPASSPAAPV 423

Query: 769 FMFGSAAAVPSGGQPVFQFGSQNSVPPSANSFQP 870
           F    A AVPS G  VFQFG Q        +F P
Sbjct: 424 F---GAPAVPSAG--VFQFGGQQGSMQQNAAFPP 452


>gb|ABF99255.1| expressed protein [Oryza sativa Japonica Group]
          Length = 1142

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 46/94 (48%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
 Frame = +1

Query: 607  QPSFGVS-AVPSFGSGFPQNDQMNVEDSMTDDAVQPTVSTVP-----TFGQPANSQTPPS 768
            QP+FG++ A  SFG G P NDQMNVEDSM DD  Q   +  P      FGQPA+S   P 
Sbjct: 1016 QPAFGMTNANTSFGMGSPGNDQMNVEDSMADDTNQAAPAPAPIFGSSPFGQPASSPAAPV 1075

Query: 769  FMFGSAAAVPSGGQPVFQFGSQNSVPPSANSFQP 870
            F    A AVPS G  VFQFG Q        +F P
Sbjct: 1076 F---GAPAVPSAG--VFQFGGQQGSMQQNAAFPP 1104


>ref|NP_001051501.1| Os03g0788300 [Oryza sativa Japonica Group] gi|50355740|gb|AAT75265.1|
            putative cell wall protein [Oryza sativa Japonica Group]
            gi|113549972|dbj|BAF13415.1| Os03g0788300 [Oryza sativa
            Japonica Group]
          Length = 1184

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 46/94 (48%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
 Frame = +1

Query: 607  QPSFGVS-AVPSFGSGFPQNDQMNVEDSMTDDAVQPTVSTVP-----TFGQPANSQTPPS 768
            QP+FG++ A  SFG G P NDQMNVEDSM DD  Q   +  P      FGQPA+S   P 
Sbjct: 1058 QPAFGMTNANTSFGMGSPGNDQMNVEDSMADDTNQAAPAPAPIFGSSPFGQPASSPAAPV 1117

Query: 769  FMFGSAAAVPSGGQPVFQFGSQNSVPPSANSFQP 870
            F    A AVPS G  VFQFG Q        +F P
Sbjct: 1118 F---GAPAVPSAG--VFQFGGQQGSMQQNAAFPP 1146


>ref|XP_002514439.1| conserved hypothetical protein [Ricinus communis]
            gi|223546435|gb|EEF47935.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1241

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +1

Query: 607  QPSFGV-SAVPSFGSGFPQNDQMNVEDSMTDDAVQPTVSTVPTFGQPANSQTPPSFMFGS 783
            QP+F   S+  +FGS    NDQMN+EDSM +D VQ T STVP FGQ + +     F+FGS
Sbjct: 1105 QPAFASPSSASTFGSSPGNNDQMNMEDSMAEDTVQAT-STVPVFGQQSTAPPSSGFVFGS 1163

Query: 784  AAAVPSGGQPVFQFGSQNSVPPSANSFQ 867
             A  P+GG    QF S  +VP + N FQ
Sbjct: 1164 TA--PTGGN---QFVSTPTVPAATNPFQ 1186


>gb|EEC76301.1| hypothetical protein OsI_13821 [Oryza sativa Indica Group]
          Length = 614

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 45/94 (47%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
 Frame = +1

Query: 607 QPSFGVS-AVPSFGSGFPQNDQMNVEDSMTDDAVQPTVSTVPTFGQ-----PANSQTPPS 768
           QP+FG++ A  SFG G P NDQMNVEDSM DD  Q   +  P FG      PA+S   P 
Sbjct: 488 QPAFGMTNANTSFGMGSPGNDQMNVEDSMADDTNQAAPAPAPIFGSSPFGPPASSPAAPV 547

Query: 769 FMFGSAAAVPSGGQPVFQFGSQNSVPPSANSFQP 870
           F    A AVPS G  VFQFG Q        +F P
Sbjct: 548 F---GAPAVPSAG--VFQFGGQQGSMQQNAAFPP 576


Top