BLASTX nr result

ID: Dioscorea21_contig00010254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010254
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147681.1| PREDICTED: pumilio homolog 1-like [Cucumis s...   148   5e-34
ref|XP_002524201.1| pumilio, putative [Ricinus communis] gi|2235...   145   3e-33
ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vin...   145   4e-33
emb|CBI31647.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_002316273.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32

>ref|XP_004147681.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
           gi|449503257|ref|XP_004161912.1| PREDICTED: pumilio
           homolog 1-like [Cucumis sativus]
          Length = 1016

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/80 (92%), Positives = 76/80 (95%)
 Frame = -3

Query: 241 EFSSDQYGSRFIQQKLETATDEEKNMVFEEIMPQALPLMTDVFGNYVVQKFFEHGTAGQI 62
           EFSSDQYGSRFIQQKLETA+ EEK+MVF EIMPQAL LMTDVFGNYVVQKFFEHGTA QI
Sbjct: 684 EFSSDQYGSRFIQQKLETASVEEKDMVFHEIMPQALSLMTDVFGNYVVQKFFEHGTASQI 743

Query: 61  RELADQLNGHVLALSLQMYG 2
           RELADQLNGHVLALSLQMYG
Sbjct: 744 RELADQLNGHVLALSLQMYG 763


>ref|XP_002524201.1| pumilio, putative [Ricinus communis] gi|223536478|gb|EEF38125.1|
           pumilio, putative [Ricinus communis]
          Length = 999

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/80 (88%), Positives = 74/80 (92%)
 Frame = -3

Query: 241 EFSSDQYGSRFIQQKLETATDEEKNMVFEEIMPQALPLMTDVFGNYVVQKFFEHGTAGQI 62
           EFS+DQYGSRFIQQKLETAT EEKNMVF EIMPQAL LMTDVFGNYV+QKFFEHG+A QI
Sbjct: 670 EFSADQYGSRFIQQKLETATTEEKNMVFNEIMPQALSLMTDVFGNYVIQKFFEHGSAAQI 729

Query: 61  RELADQLNGHVLALSLQMYG 2
           RELADQL GHVL LSLQMYG
Sbjct: 730 RELADQLTGHVLTLSLQMYG 749


>ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1015

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/80 (88%), Positives = 74/80 (92%)
 Frame = -3

Query: 241 EFSSDQYGSRFIQQKLETATDEEKNMVFEEIMPQALPLMTDVFGNYVVQKFFEHGTAGQI 62
           EFS+DQYGSRFIQQKLETAT EEK+MVF EIMPQAL LMTDVFGNYV+QKFFEHGTA QI
Sbjct: 687 EFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTASQI 746

Query: 61  RELADQLNGHVLALSLQMYG 2
           RELADQL GHVL LSLQMYG
Sbjct: 747 RELADQLTGHVLTLSLQMYG 766


>emb|CBI31647.3| unnamed protein product [Vitis vinifera]
          Length = 874

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/80 (88%), Positives = 74/80 (92%)
 Frame = -3

Query: 241 EFSSDQYGSRFIQQKLETATDEEKNMVFEEIMPQALPLMTDVFGNYVVQKFFEHGTAGQI 62
           EFS+DQYGSRFIQQKLETAT EEK+MVF EIMPQAL LMTDVFGNYV+QKFFEHGTA QI
Sbjct: 546 EFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTASQI 605

Query: 61  RELADQLNGHVLALSLQMYG 2
           RELADQL GHVL LSLQMYG
Sbjct: 606 RELADQLTGHVLTLSLQMYG 625


>ref|XP_002316273.1| predicted protein [Populus trichocarpa] gi|222865313|gb|EEF02444.1|
           predicted protein [Populus trichocarpa]
          Length = 938

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/80 (87%), Positives = 74/80 (92%)
 Frame = -3

Query: 241 EFSSDQYGSRFIQQKLETATDEEKNMVFEEIMPQALPLMTDVFGNYVVQKFFEHGTAGQI 62
           EFS+DQYGSRFIQQKLETA  EEKNMVF+EIMPQAL LMTDVFGNYV+QKFFEHG+A QI
Sbjct: 622 EFSADQYGSRFIQQKLETAMTEEKNMVFDEIMPQALSLMTDVFGNYVIQKFFEHGSASQI 681

Query: 61  RELADQLNGHVLALSLQMYG 2
           RELADQL GHVL LSLQMYG
Sbjct: 682 RELADQLTGHVLTLSLQMYG 701


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