BLASTX nr result

ID: Dioscorea21_contig00010245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010245
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75720.1| unknown [Picea sitchensis] gi|294462899|gb|ADE769...    87   1e-15
ref|XP_002302989.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_003574697.1| PREDICTED: eukaryotic translation initiation...    85   5e-15
ref|XP_002333033.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
gb|AFG65634.1| Pinus taeda anonymous locus 2_2582_02 genomic seq...    84   2e-14

>gb|ADE75720.1| unknown [Picea sitchensis] gi|294462899|gb|ADE76990.1| unknown
           [Picea sitchensis]
          Length = 454

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/67 (61%), Positives = 50/67 (74%)
 Frame = +3

Query: 6   QLKTALSSLPGSPVEVMNALFEALFDGAGKGFAKEVTKKKNYLTAFVQDEESQMLLLGAV 185
           QL+  + S  GSP E+MNA FEALF+G GKGF+KEV+ KK YL+  VQDE SQ +LLGA+
Sbjct: 326 QLQNYMQSSDGSPQEIMNAYFEALFEGVGKGFSKEVSSKKGYLSGVVQDENSQSMLLGAI 385

Query: 186 ETFCQKA 206
           E FC  A
Sbjct: 386 EAFCNHA 392


>ref|XP_002302989.1| predicted protein [Populus trichocarpa] gi|222844715|gb|EEE82262.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +3

Query: 3   SQLKTALSSLPGSPVEVMNALFEALFDGAGKGFAKEVTKKKNYLTAFV-QDEESQMLLLG 179
           SQL++ LSSL GS  E ++ALFEALF+G  KGF KEV KKKNYL A V QDE SQ+LLL 
Sbjct: 323 SQLRSTLSSLNGSAQEKIDALFEALFEGVAKGFVKEVDKKKNYLAAAVAQDERSQLLLLR 382

Query: 180 AVETFCQKAS 209
           A+E FC K+S
Sbjct: 383 AIEAFCIKSS 392


>ref|XP_003574697.1| PREDICTED: eukaryotic translation initiation factor 5-like
           [Brachypodium distachyon]
          Length = 454

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/69 (63%), Positives = 51/69 (73%)
 Frame = +3

Query: 3   SQLKTALSSLPGSPVEVMNALFEALFDGAGKGFAKEVTKKKNYLTAFVQDEESQMLLLGA 182
           +QLKT LSS   SP EVM+ALFEALF G GKGFAK+V K K +L A V DE++QMLLL  
Sbjct: 326 AQLKTLLSSSALSPKEVMDALFEALFHGVGKGFAKDVLKNKKFLAAAVPDEDAQMLLLQT 385

Query: 183 VETFCQKAS 209
           +E FC K S
Sbjct: 386 IEAFCGKCS 394


>ref|XP_002333033.1| predicted protein [Populus trichocarpa] gi|222834469|gb|EEE72946.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +3

Query: 3   SQLKTALSSLPGSPVEVMNALFEALFDGAGKGFAKEVTKKKNYLTAFV-QDEESQMLLLG 179
           SQL++ LSSL GS  E ++ALFEALF+G  KGF KEV KKKNYL A V QDE SQ+LLL 
Sbjct: 323 SQLRSTLSSLNGSAQEKIDALFEALFEGVVKGFVKEVDKKKNYLAAAVAQDERSQLLLLR 382

Query: 180 AVETFCQKAS 209
           A+E FC K+S
Sbjct: 383 AIEAFCIKSS 392


>gb|AFG65634.1| Pinus taeda anonymous locus 2_2582_02 genomic sequence
           gi|383165520|gb|AFG65635.1| Pinus taeda anonymous locus
           2_2582_02 genomic sequence gi|383165522|gb|AFG65636.1|
           Pinus taeda anonymous locus 2_2582_02 genomic sequence
           gi|383165524|gb|AFG65637.1| Pinus taeda anonymous locus
           2_2582_02 genomic sequence gi|383165526|gb|AFG65638.1|
           Pinus taeda anonymous locus 2_2582_02 genomic sequence
           gi|383165528|gb|AFG65639.1| Pinus taeda anonymous locus
           2_2582_02 genomic sequence gi|383165530|gb|AFG65640.1|
           Pinus taeda anonymous locus 2_2582_02 genomic sequence
           gi|383165532|gb|AFG65641.1| Pinus taeda anonymous locus
           2_2582_02 genomic sequence gi|383165534|gb|AFG65642.1|
           Pinus taeda anonymous locus 2_2582_02 genomic sequence
           gi|383165536|gb|AFG65643.1| Pinus taeda anonymous locus
           2_2582_02 genomic sequence gi|383165538|gb|AFG65644.1|
           Pinus taeda anonymous locus 2_2582_02 genomic sequence
           gi|383165540|gb|AFG65645.1| Pinus taeda anonymous locus
           2_2582_02 genomic sequence
          Length = 145

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/67 (58%), Positives = 49/67 (73%)
 Frame = +3

Query: 6   QLKTALSSLPGSPVEVMNALFEALFDGAGKGFAKEVTKKKNYLTAFVQDEESQMLLLGAV 185
           +L++ + S  GSP E+MNA FEALFDG G+GF+KE   KK YL+  VQDE SQ +LLGA+
Sbjct: 17  KLQSYIKSSNGSPQEIMNAYFEALFDGVGRGFSKEALMKKGYLSRVVQDENSQSMLLGAI 76

Query: 186 ETFCQKA 206
           E FC  A
Sbjct: 77  EAFCNNA 83


Top