BLASTX nr result

ID: Dioscorea21_contig00010189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010189
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264002.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...   131   9e-29
emb|CAN82106.1| hypothetical protein VITISV_006024 [Vitis vinifera]   131   9e-29
emb|CBI35207.3| unnamed protein product [Vitis vinifera]              129   4e-28
tpg|DAA50390.1| TPA: putative RING zinc finger domain superfamil...   124   1e-26
gb|EEC75789.1| hypothetical protein OsI_12718 [Oryza sativa Indi...   114   1e-23

>ref|XP_002264002.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Vitis vinifera]
          Length = 449

 Score =  131 bits (329), Expect = 9e-29
 Identities = 84/211 (39%), Positives = 114/211 (54%), Gaps = 26/211 (12%)
 Frame = +1

Query: 4   QSALTGKRTKAVGRRAANLSAPSPPINECAKKDND--DDLMEDLSSPETLSKIIQNKKQG 177
           Q+ LTG+RTKAV R++  L   S  I E  KK+ D  +D  E  SSPE+ +K+ Q KKQ 
Sbjct: 125 QTGLTGRRTKAVARKSTALRGSSFSIVEPIKKEEDSVEDCPESSSSPESRNKVAQTKKQN 184

Query: 178 TSIAEPS-NLASHRDLGNGGDPFLNKAEYWKPLNCLVEAANRTKPLRSSSPQNPVVKVEQ 354
           +SI+E S +   ++D  N  DP+  K + W PLNCLVEAANRTK  + +S    + K E 
Sbjct: 185 SSISEASKDQKPNKDTENDADPWDGKVDLWTPLNCLVEAANRTKSSKFNSQGTSLAKSEP 244

Query: 355 TNGLDIDAHLPKIKA-------------------REHANKSKAQDDKNGSVSLPQIPPKA 477
            N  D + ++PK KA                   +EH +K K QDDKNG+  LP  P K 
Sbjct: 245 FNAPDSEVYMPKTKAKAEPLNAADGEVCIPKTKIKEHGHKIKVQDDKNGAALLPG-PVKR 303

Query: 478 KRSSGAGRKR----KDNATSVQALIDAAGKR 558
           +R    GRKR     +  T  Q ++ AAG +
Sbjct: 304 RRMRAVGRKRISASGEMCTPAQVVLSAAGAK 334


>emb|CAN82106.1| hypothetical protein VITISV_006024 [Vitis vinifera]
          Length = 662

 Score =  131 bits (329), Expect = 9e-29
 Identities = 84/211 (39%), Positives = 114/211 (54%), Gaps = 26/211 (12%)
 Frame = +1

Query: 4   QSALTGKRTKAVGRRAANLSAPSPPINECAKKDND--DDLMEDLSSPETLSKIIQNKKQG 177
           Q+ LTG+RTKAV R++  L   S  I E  KK+ D  +D  E  SSPE+ +K+ Q KKQ 
Sbjct: 125 QTGLTGRRTKAVARKSTALRGSSFSIVEPIKKEEDSVEDCPESSSSPESRNKVAQTKKQN 184

Query: 178 TSIAEPS-NLASHRDLGNGGDPFLNKAEYWKPLNCLVEAANRTKPLRSSSPQNPVVKVEQ 354
           +SI+E S +   ++D  N  DP+  K + W PLNCLVEAANRTK  + +S    + K E 
Sbjct: 185 SSISEASKDQKPNKDTENDADPWDGKVDLWTPLNCLVEAANRTKSSKFNSQGTSLAKSEP 244

Query: 355 TNGLDIDAHLPKIKA-------------------REHANKSKAQDDKNGSVSLPQIPPKA 477
            N  D + ++PK KA                   +EH +K K QDDKNG+  LP  P K 
Sbjct: 245 FNAPDSEVYMPKTKAKAEPLNAADGEVCIPKTKIKEHGHKIKVQDDKNGAALLPG-PVKR 303

Query: 478 KRSSGAGRKR----KDNATSVQALIDAAGKR 558
           +R    GRKR     +  T  Q ++ AAG +
Sbjct: 304 RRMRAVGRKRISASGEMCTPAQVVLSAAGAK 334


>emb|CBI35207.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  129 bits (323), Expect = 4e-28
 Identities = 81/192 (42%), Positives = 109/192 (56%), Gaps = 7/192 (3%)
 Frame = +1

Query: 4   QSALTGKRTKAVGRRAANLSAPSPPINECAKKDND--DDLMEDLSSPETLSKIIQNKKQG 177
           Q+ LTG+RTKAV R++  L   S  I E  KK+ D  +D  E  SSPE+ +K+ Q KKQ 
Sbjct: 125 QTGLTGRRTKAVARKSTALRGSSFSIVEPIKKEEDSVEDCPESSSSPESRNKVAQTKKQN 184

Query: 178 TSIAEPS-NLASHRDLGNGGDPFLNKAEYWKPLNCLVEAANRTKPLRSSSPQNPVVKVEQ 354
           +SI+E S +   ++D  N  DP+  K + W PLNCLVEAANRTK  + +S    + K E 
Sbjct: 185 SSISEASKDQKPNKDTENDADPWDGKVDLWTPLNCLVEAANRTKSSKFNSQGTSLAKSEP 244

Query: 355 TNGLDIDAHLPKIKAREHANKSKAQDDKNGSVSLPQIPPKAKRSSGAGRKR----KDNAT 522
            N  D +      K +EH +K K QDDKNG+  LP  P K +R    GRKR     +  T
Sbjct: 245 FNAPDSET-----KIKEHGHKIKVQDDKNGAALLPG-PVKRRRMRAVGRKRISASGEMCT 298

Query: 523 SVQALIDAAGKR 558
             Q ++ AAG +
Sbjct: 299 PAQVVLSAAGAK 310


>tpg|DAA50390.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 526

 Score =  124 bits (310), Expect = 1e-26
 Identities = 79/179 (44%), Positives = 108/179 (60%), Gaps = 10/179 (5%)
 Frame = +1

Query: 7   SALTGKRTKAVGRRAANLSAPS-------PPINECAKKDND--DDLMEDLSSPETLSKII 159
           + LTG+RT+AV R+AA ++  +       P I +  KK+ D  D    D + P + SK  
Sbjct: 219 TGLTGRRTRAVARKAAAVATATVTLHELRPVIEDPVKKEIDSCDSHPHDSNLPASSSKAP 278

Query: 160 QNKKQGTSIAEPSNLASHRDL-GNGGDPFLNKAEYWKPLNCLVEAANRTKPLRSSSPQNP 336
           Q ++Q +   E SN +S++D  G+  D   +K+E W+PLNCLVEAANRTK  RSSS Q+P
Sbjct: 279 QIRRQISPNVEASNRSSNKDTEGDSNDELADKSELWRPLNCLVEAANRTKSFRSSS-QSP 337

Query: 337 VVKVEQTNGLDIDAHLPKIKAREHANKSKAQDDKNGSVSLPQIPPKAKRSSGAGRKRKD 513
           VVK EQ NG        K KARE+  KSK QDDK   V +P + PK +R+ G  RK++D
Sbjct: 338 VVKGEQPNGSTSSTFASKAKARENLEKSKIQDDKK-DVPMPPVLPK-RRAQGTARKKRD 394


>gb|EEC75789.1| hypothetical protein OsI_12718 [Oryza sativa Indica Group]
          Length = 458

 Score =  114 bits (285), Expect = 1e-23
 Identities = 75/189 (39%), Positives = 109/189 (57%), Gaps = 3/189 (1%)
 Frame = +1

Query: 7   SALTGKRTKAVGRRAANLSAPSPPINECAKK--DNDDDLMEDLSSPETLSKIIQNKKQGT 180
           + LTG+RT+AV R+AA L    P I++  KK  DN +   ++ S P  L K+ Q ++Q +
Sbjct: 164 TGLTGRRTRAVTRKAAALRGLGPGIDDPVKKEIDNGEKHAQNSSLPTNLGKVPQTRRQMS 223

Query: 181 SIAEPSNLASHRDLGNGGDPFLNKA-EYWKPLNCLVEAANRTKPLRSSSPQNPVVKVEQT 357
           S AE SN +S++D         +K  E W+PLNCLVEAANRTK  RSSS Q+P+VK EQ 
Sbjct: 224 SNAEASNHSSNKDTEGDRKDLADKTDELWRPLNCLVEAANRTKSSRSSS-QSPIVKREQL 282

Query: 358 NGLDIDAHLPKIKAREHANKSKAQDDKNGSVSLPQIPPKAKRSSGAGRKRKDNATSVQAL 537
           +       + K K+RE+  KSK +DDK        +P   +++   GR+R+ +A S    
Sbjct: 283 SDSPGSTSVNKTKSREYMQKSKIEDDKK------DVPLLKRKNQRTGRRRELHAQSDSKP 336

Query: 538 IDAAGKRER 564
             AA + E+
Sbjct: 337 EAAATQNEK 345


Top