BLASTX nr result

ID: Dioscorea21_contig00010184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010184
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297973.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_004148998.1| PREDICTED: uncharacterized protein LOC101210...    56   3e-06
ref|XP_003534582.1| PREDICTED: uncharacterized protein LOC100776...    56   3e-06
ref|XP_002509967.1| conserved hypothetical protein [Ricinus comm...    56   4e-06
ref|XP_002304561.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002297973.1| predicted protein [Populus trichocarpa] gi|222845231|gb|EEE82778.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 10/76 (13%)
 Frame = +3

Query: 36  MAVSMPLQ-TFRKSLFLA----PRKHHASFS-----PRTSFTPSAKFDLFELMGGRGLCK 185
           MA S+ LQ T  +S FL     P   H  +S      R      AKFD FE++GGRGLC 
Sbjct: 1   MASSITLQSTLLRSSFLGQNNFPNHPHKPYSLIPKEHRLKIKTCAKFDPFEILGGRGLCN 60

Query: 186 GEKGIQKELKKSIEGE 233
           GEKG+Q+EL+++IE E
Sbjct: 61  GEKGVQQELQRNIEEE 76


>ref|XP_004148998.1| PREDICTED: uncharacterized protein LOC101210548 [Cucumis sativus]
           gi|449506166|ref|XP_004162671.1| PREDICTED:
           uncharacterized LOC101210548 [Cucumis sativus]
          Length = 242

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
 Frame = +3

Query: 3   TSSSLVNPSMAMAVSMPLQTFRKSLFL-----APRKHHASFSPRTSFTPSAKFDLFELMG 167
           +S SL +P   +  S  L   R+ L L      P +H +S   + +F PSA FDL +L+G
Sbjct: 5   SSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASS--TQHAFRPSAAFDLAQLLG 62

Query: 168 GRGLCKGEKGIQKELKKSIE 227
           GRGLC GE+G+++ELK++++
Sbjct: 63  GRGLCNGEQGLKEELKRNVD 82


>ref|XP_003534582.1| PREDICTED: uncharacterized protein LOC100776479 [Glycine max]
          Length = 157

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/43 (55%), Positives = 30/43 (69%)
 Frame = +3

Query: 96  HHASFSPRTSFTPSAKFDLFELMGGRGLCKGEKGIQKELKKSI 224
           HH +        P AKF++ E+MGGRGLC GEKGIQ+ELKK +
Sbjct: 39  HHKTAPTHEVLKPHAKFNILEMMGGRGLCNGEKGIQQELKKQV 81


>ref|XP_002509967.1| conserved hypothetical protein [Ricinus communis]
           gi|223549866|gb|EEF51354.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 238

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 11/72 (15%)
 Frame = +3

Query: 36  MAVSMPLQ-TFRKSLFLA--------PRKHHASFSPRTSFT--PSAKFDLFELMGGRGLC 182
           MA S+ LQ T  +S FL         P + ++S    + F   P AKFDLFE +GGRGLC
Sbjct: 1   MASSITLQGTLLRSHFLGQNNSLLNRPNRPYSSIPKESRFKLKPCAKFDLFEFLGGRGLC 60

Query: 183 KGEKGIQKELKK 218
            GE+GIQ+ELK+
Sbjct: 61  NGEQGIQQELKR 72


>ref|XP_002304561.1| predicted protein [Populus trichocarpa] gi|222841993|gb|EEE79540.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = +3

Query: 69  KSLFLAPRKHHASFSPRTSFTPSAKFDLFELMGGRGLCKGEKGIQKELKKSIE 227
           K   L P+ H      R      AK DLFE++GGRGLC GEKG+Q+ELK++IE
Sbjct: 28  KPYSLIPKDH------RLKLKTCAKLDLFEILGGRGLCNGEKGVQQELKRNIE 74


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