BLASTX nr result

ID: Dioscorea21_contig00010176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010176
         (1661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40588.3| unnamed protein product [Vitis vinifera]              244   6e-62
ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing fac...   242   2e-61
ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing fac...   237   8e-60
ref|XP_002523299.1| arginine/serine-rich splicing factor, putati...   224   7e-56
ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing fac...   223   9e-56

>emb|CBI40588.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  244 bits (622), Expect = 6e-62
 Identities = 135/225 (60%), Positives = 154/225 (68%)
 Frame = -3

Query: 987 IIQSSLFTS*CSSLIRLTQISGFAFIYFEDERDAEDAIRALDGAPFGEGRRRLSVEWSKG 808
           IIQ   F   C+S + ++  SGFAF+YFEDE DA+DAIR LD  PFG  RRRLSVEW+KG
Sbjct: 2   IIQGLYFF--CASALHIS--SGFAFVYFEDEHDADDAIRGLDNIPFGYDRRRLSVEWAKG 57

Query: 807 ERGGPRHRDGSRSNAGGRPTKTLFVINFDQHQTRTRDIERHFEPYGKILNVRIRRNFAFV 628
           ERG  RHR+GSRS A  RPTKTLFVINFD  +TR RDIERHFEPYGK+L+VRIRRNFAFV
Sbjct: 58  ERG--RHREGSRSMANQRPTKTLFVINFDPIRTRIRDIERHFEPYGKVLHVRIRRNFAFV 115

Query: 627 QFETQEEATKALKYTHMSQLLDRVVSVEYALXXXXXXXXXXXXXXXXXXXXXDXXXXXXX 448
           Q+ETQE+ATKAL+ THMS++LDRVVSVEYAL                             
Sbjct: 116 QYETQEDATKALECTHMSKILDRVVSVEYAL-------RDDSDKYDSPRRGGYSRRGESP 168

Query: 447 XXXXXXXXXXRGRPSPDYGRARSPVYGRYDGPPAFDNRSPDYDHY 313
                     RGRPSPDYGRA+SPVY RY+GP    NRSP+Y  Y
Sbjct: 169 YGRSPSPVNRRGRPSPDYGRAQSPVYDRYNGPAYERNRSPEYGRY 213


>ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis
           vinifera]
          Length = 241

 Score =  242 bits (618), Expect = 2e-61
 Identities = 130/210 (61%), Positives = 146/210 (69%)
 Frame = -3

Query: 942 RLTQISGFAFIYFEDERDAEDAIRALDGAPFGEGRRRLSVEWSKGERGGPRHRDGSRSNA 763
           R+   SGFAF+YFEDE DA+DAIR LD  PFG  RRRLSVEW+KGERG  RHR+GSRS A
Sbjct: 30  RVDMKSGFAFVYFEDEHDADDAIRGLDNIPFGYDRRRLSVEWAKGERG--RHREGSRSMA 87

Query: 762 GGRPTKTLFVINFDQHQTRTRDIERHFEPYGKILNVRIRRNFAFVQFETQEEATKALKYT 583
             RPTKTLFVINFD  +TR RDIERHFEPYGK+L+VRIRRNFAFVQ+ETQE+ATKAL+ T
Sbjct: 88  NQRPTKTLFVINFDPIRTRIRDIERHFEPYGKVLHVRIRRNFAFVQYETQEDATKALECT 147

Query: 582 HMSQLLDRVVSVEYALXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXRGRPS 403
           HMS++LDRVVSVEYAL                                       RGRPS
Sbjct: 148 HMSKILDRVVSVEYAL-------RDDSDKYDSPRRGGYSRRGESPYGRSPSPVNRRGRPS 200

Query: 402 PDYGRARSPVYGRYDGPPAFDNRSPDYDHY 313
           PDYGRA+SPVY RY+GP    NRSP+Y  Y
Sbjct: 201 PDYGRAQSPVYDRYNGPAYERNRSPEYGRY 230


>ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis
           sativus] gi|449477961|ref|XP_004155176.1| PREDICTED:
           arginine/serine-rich-splicing factor RSP31-like [Cucumis
           sativus]
          Length = 253

 Score =  237 bits (604), Expect = 8e-60
 Identities = 129/207 (62%), Positives = 141/207 (68%)
 Frame = -3

Query: 942 RLTQISGFAFIYFEDERDAEDAIRALDGAPFGEGRRRLSVEWSKGERGGPRHRDGSRSNA 763
           R+   SGFAF+YFEDERDAEDAIR LD  PFG  RRRLSVEW++GERG  RHRDGS+S A
Sbjct: 30  RIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERG--RHRDGSKSMA 87

Query: 762 GGRPTKTLFVINFDQHQTRTRDIERHFEPYGKILNVRIRRNFAFVQFETQEEATKALKYT 583
             RPTKTLFVINFD  +TR RDIERHFEPYGK+LNVRIRRNFAFVQFETQE+ATKAL+ T
Sbjct: 88  NQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECT 147

Query: 582 HMSQLLDRVVSVEYALXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXRGRPS 403
           HMS++LDRVVSVEYAL                                         RPS
Sbjct: 148 HMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRR---RPS 204

Query: 402 PDYGRARSPVYGRYDGPPAFDNRSPDY 322
           PDYGRA SP Y RY+GP     RSPDY
Sbjct: 205 PDYGRAHSPAYDRYNGPYE-RRRSPDY 230


>ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223537387|gb|EEF39015.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 259

 Score =  224 bits (570), Expect = 7e-56
 Identities = 121/207 (58%), Positives = 138/207 (66%)
 Frame = -3

Query: 942 RLTQISGFAFIYFEDERDAEDAIRALDGAPFGEGRRRLSVEWSKGERGGPRHRDGSRSNA 763
           R+   SGFAF+YFEDERDA DAIR LD   FG  RR+LSVEW++GERG  RHRDGSRS A
Sbjct: 31  RVDMKSGFAFVYFEDERDAADAIRGLDNISFGYDRRKLSVEWARGERG--RHRDGSRSMA 88

Query: 762 GGRPTKTLFVINFDQHQTRTRDIERHFEPYGKILNVRIRRNFAFVQFETQEEATKALKYT 583
             RPTKTLFVINFD   TR  DI+RHFE YG++L+VRIRRNFAFVQFETQE+ATKAL+ T
Sbjct: 89  NQRPTKTLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRNFAFVQFETQEDATKALECT 148

Query: 582 HMSQLLDRVVSVEYALXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXRGRPS 403
           HM+++LDRVVSVEYAL                                         RPS
Sbjct: 149 HMTKILDRVVSVEYALRDDSERGDKSDSPRRGSHYGRSPSPVYRR------------RPS 196

Query: 402 PDYGRARSPVYGRYDGPPAFDNRSPDY 322
           PDYGRARSPVY +Y+GP     RSP+Y
Sbjct: 197 PDYGRARSPVYDKYNGPSYDRRRSPEY 223


>ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
           max]
          Length = 264

 Score =  223 bits (569), Expect = 9e-56
 Identities = 120/210 (57%), Positives = 142/210 (67%)
 Frame = -3

Query: 942 RLTQISGFAFIYFEDERDAEDAIRALDGAPFGEGRRRLSVEWSKGERGGPRHRDGSRSNA 763
           R+   SGFAF+Y+EDERDAE+AIRALD  PFG  +RRLSVEW++GERG  RHRDGS++N 
Sbjct: 30  RVDMKSGFAFVYYEDERDAEEAIRALDNVPFGHEKRRLSVEWARGERG--RHRDGSKANQ 87

Query: 762 GGRPTKTLFVINFDQHQTRTRDIERHFEPYGKILNVRIRRNFAFVQFETQEEATKALKYT 583
             +PTKTLFVINFD  +TR RDIE+HFEPYG +L+VRIRRNFAFVQFETQE+ATKA++ T
Sbjct: 88  --KPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLHVRIRRNFAFVQFETQEDATKAIECT 145

Query: 582 HMSQLLDRVVSVEYALXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXRGRPS 403
           +MS++LDRVVSVEYAL                                         RPS
Sbjct: 146 NMSKILDRVVSVEYALRDDGERGDNYDSPRRGGYERSPSPYHR--------------RPS 191

Query: 402 PDYGRARSPVYGRYDGPPAFDNRSPDYDHY 313
           PDYGR RSPVY RY+G      RSPDY  +
Sbjct: 192 PDYGRPRSPVYDRYNGGGPDRRRSPDYGRH 221


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