BLASTX nr result
ID: Dioscorea21_contig00010131
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00010131 (965 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI17917.3| unnamed protein product [Vitis vinifera] 244 2e-62 ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g... 244 2e-62 emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera] 228 2e-57 ref|XP_002332094.1| predicted protein [Populus trichocarpa] gi|2... 225 1e-56 ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus ... 223 4e-56 >emb|CBI17917.3| unnamed protein product [Vitis vinifera] Length = 364 Score = 244 bits (624), Expect = 2e-62 Identities = 140/254 (55%), Positives = 173/254 (68%), Gaps = 8/254 (3%) Frame = -2 Query: 964 AADEKVVDIHGEFLKVHTALEAVVGHLRKFLVDHGVLPLFEKNLKMQLSQDHPVDTWGDK 785 AADE++V++ GE LKV ALEAVVGHLRKFLVDH VLPLFE+ +SQD DTW DK Sbjct: 116 AADERIVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADK 175 Query: 784 TQSSGYNTQQTMMGDDYPAPMKRASLFIDHDSHLESQISRSSLSLYGPEPAVSGLRSPGL 605 + G T QT MG DY P KR SL++D E+Q+ S L +YG E +SG+RS GL Sbjct: 176 SLLHG--TSQTGMGSDYSLPAKRESLYLDR----ETQMEHSGLPMYGQEHGLSGIRSSGL 229 Query: 604 VRAPGAIISQMTKKMQIPLLYAEAIIGIEGKRISYIRRASGAELTIRESITSSDEITVEI 425 RA I++Q+ + MQIPL YAE IIGI G I+YIRR SGA LT++ES DEITVEI Sbjct: 230 GRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEI 289 Query: 424 KGTSQEVQAAELLIQEFISGYREPESGRY--LDAGPR-TYAQMPSSGY----YPSQPY-G 269 KGTS +VQ A+ LIQEFIS ++EP Y +D+G R +Y+Q+ ++ Y SQPY G Sbjct: 290 KGTSSQVQTAQQLIQEFISNHKEPVPSSYGKMDSGLRSSYSQLGNTSYSSSSLSSQPYGG 349 Query: 268 RYESSDVGGYHNYR 227 Y SS VGGY +YR Sbjct: 350 GYGSSGVGGYSSYR 363 >ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis vinifera] Length = 466 Score = 244 bits (624), Expect = 2e-62 Identities = 140/254 (55%), Positives = 173/254 (68%), Gaps = 8/254 (3%) Frame = -2 Query: 964 AADEKVVDIHGEFLKVHTALEAVVGHLRKFLVDHGVLPLFEKNLKMQLSQDHPVDTWGDK 785 AADE++V++ GE LKV ALEAVVGHLRKFLVDH VLPLFE+ +SQD DTW DK Sbjct: 218 AADERIVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADK 277 Query: 784 TQSSGYNTQQTMMGDDYPAPMKRASLFIDHDSHLESQISRSSLSLYGPEPAVSGLRSPGL 605 + G T QT MG DY P KR SL++D E+Q+ S L +YG E +SG+RS GL Sbjct: 278 SLLHG--TSQTGMGSDYSLPAKRESLYLDR----ETQMEHSGLPMYGQEHGLSGIRSSGL 331 Query: 604 VRAPGAIISQMTKKMQIPLLYAEAIIGIEGKRISYIRRASGAELTIRESITSSDEITVEI 425 RA I++Q+ + MQIPL YAE IIGI G I+YIRR SGA LT++ES DEITVEI Sbjct: 332 GRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEI 391 Query: 424 KGTSQEVQAAELLIQEFISGYREPESGRY--LDAGPR-TYAQMPSSGY----YPSQPY-G 269 KGTS +VQ A+ LIQEFIS ++EP Y +D+G R +Y+Q+ ++ Y SQPY G Sbjct: 392 KGTSSQVQTAQQLIQEFISNHKEPVPSSYGKMDSGLRSSYSQLGNTSYSSSSLSSQPYGG 451 Query: 268 RYESSDVGGYHNYR 227 Y SS VGGY +YR Sbjct: 452 GYGSSGVGGYSSYR 465 >emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera] Length = 473 Score = 228 bits (581), Expect = 2e-57 Identities = 135/254 (53%), Positives = 166/254 (65%), Gaps = 8/254 (3%) Frame = -2 Query: 964 AADEKVVDIHGEFLKVHTALEAVVGHLRKFLVDHGVLPLFEKNLKMQLSQDHPVDTWGDK 785 AADE++V++ GE LKV ALEAVVGHLRKFLVDH VLPLFE+ +SQD DTW DK Sbjct: 234 AADERIVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADK 293 Query: 784 TQSSGYNTQQTMMGDDYPAPMKRASLFIDHDSHLESQISRSSLSLYGPEPAVSGLRSPGL 605 + G T QT MG DY P KR SL++D E+Q+ S L +YG E +SG+RS GL Sbjct: 294 SLLHG--TSQTGMGSDYSLPAKRESLYLDR----ETQMEHSGLPMYGQEHGLSGIRSSGL 347 Query: 604 VRAPGAIISQMTKKMQIPLLYAEAIIGIEGKRISYIRRASGAELTIRESITSSDEITVEI 425 RA I++Q+ + MQIPL YAE IIGI G I+YIRR SGA LT++ES DEITVEI Sbjct: 348 GRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEI 407 Query: 424 KGTSQEVQAAELLIQEFISGYREPESGRY--LDAGPR-TYAQMPSSGY----YPSQPY-G 269 KGTS QEFIS ++EP Y +D+G R +Y+Q+ ++ Y SQPY G Sbjct: 408 KGTSS---------QEFISNHKEPVPSSYGKMDSGLRSSYSQLGNTSYSSSSLSSQPYGG 458 Query: 268 RYESSDVGGYHNYR 227 Y SS VGGY +YR Sbjct: 459 GYGSSGVGGYSSYR 472 >ref|XP_002332094.1| predicted protein [Populus trichocarpa] gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa] Length = 460 Score = 225 bits (574), Expect = 1e-56 Identities = 124/249 (49%), Positives = 162/249 (65%), Gaps = 8/249 (3%) Frame = -2 Query: 961 ADEKVVDIHGEFLKVHTALEAVVGHLRKFLVDHGVLPLFEKNLKMQLSQDHPVDTWGDKT 782 +DE++V+IHGE +KV ALEAV+GHLRKFLVDH V+P+FEK +S + P D D Sbjct: 198 SDERIVEIHGEAMKVFKALEAVIGHLRKFLVDHSVIPIFEKTYNATISLERPADACADNA 257 Query: 781 QSSGYNTQQTMMG--DDYPAPMKRASLFIDHDSHLESQISRSSLSLYGPEPAVSGLRSPG 608 Q S ++ G DY +KR +H++H E +IS+ SLYG +P + GLRS G Sbjct: 258 QPSLHSAPAFSSGIISDYSLSLKRDPSIYEHETHFEHKISQPGFSLYG-DPGLVGLRSTG 316 Query: 607 LVRAPGAIISQMTKKMQIPLLYAEAIIGIEGKRISYIRRASGAELTIRESITSSDEITVE 428 L RA I++Q+T+ MQ+PL YAE IIG+ G I+YIRR SGA L+I+ES DEITVE Sbjct: 317 LGRATAPIVTQVTQTMQVPLSYAEDIIGVAGSNIAYIRRTSGAILSIQESRGLPDEITVE 376 Query: 427 IKGTSQEVQAAELLIQEFISGYREPESGRY--LDAGPRTYAQMPSSGYYPSQPY----GR 266 IKGTS +VQ A+ LIQEFIS ++EP Y +D G Y+Q+ SG YPS + G Sbjct: 377 IKGTSSQVQMAQQLIQEFISNHKEPTPNMYGKIDVGLNAYSQIAESG-YPSSSFTSHLGG 435 Query: 265 YESSDVGGY 239 Y SS +GGY Sbjct: 436 YGSSSIGGY 444 >ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis] gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis] Length = 451 Score = 223 bits (569), Expect = 4e-56 Identities = 124/254 (48%), Positives = 168/254 (66%), Gaps = 8/254 (3%) Frame = -2 Query: 964 AADEKVVDIHGEFLKVHTALEAVVGHLRKFLVDHGVLPLFEKNLKMQLSQDHPVDTWGDK 785 A DE++VD+ GE +KV ALEA+VGHLRKFLVDH VLPLFEKN +S D +TW D+ Sbjct: 199 ATDERIVDLQGEAMKVLEALEAIVGHLRKFLVDHSVLPLFEKNYNALISLDRQAETWSDR 258 Query: 784 TQSSGYNTQQTMMGDDYPAPMKRASLFIDHDSHLESQISRSSLSLYGPEPAVSGLRSPGL 605 SS + T Q + DYP KR +L ++ ++ ESQ+ S +SLYG +PA+S +RS Sbjct: 259 --SSFHTTSQGRIDIDYPLSGKRDALLLERETPFESQVPLSRISLYGQDPAISSVRSSVF 316 Query: 604 VRAPGAIISQMTKKMQIPLLYAEAIIGIEGKRISYIRRASGAELTIRESITSSDEITVEI 425 R+ I++Q+T+ MQ+P+ YAE IIGI G I YIRR SGA +T+ ES DEI VEI Sbjct: 317 NRSSVPIVTQVTQTMQVPISYAEEIIGIRGNNIEYIRRTSGAIITVNESRGLPDEIIVEI 376 Query: 424 KGTSQEVQAAELLIQEFISGY-REPESGRY--LDAGPRT-YAQMPSSGYYPS----QPYG 269 KGT+ EVQ A+ LIQEF+S + +EP + Y D G ++ Y+Q+ +S Y S + YG Sbjct: 377 KGTASEVQMAQQLIQEFLSNHNKEPVTSSYSKYDTGLKSVYSQLDNSPYTSSSLSAKSYG 436 Query: 268 RYESSDVGGYHNYR 227 Y SS +GGY ++R Sbjct: 437 EYGSSSLGGYSSFR 450