BLASTX nr result

ID: Dioscorea21_contig00010127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010127
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135885.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   313   7e-84
emb|CBI37603.3| unnamed protein product [Vitis vinifera]              312   2e-83
ref|XP_002282621.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   312   2e-83
ref|XP_002883151.1| hypothetical protein ARALYDRAFT_479390 [Arab...   310   1e-82
ref|NP_188509.1| pre-mRNA-splicing factor ISY1 [Arabidopsis thal...   309   2e-82

>ref|XP_004135885.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Cucumis sativus]
           gi|449491085|ref|XP_004158794.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 1 [Cucumis
           sativus] gi|449491087|ref|XP_004158795.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 2 [Cucumis
           sativus]
          Length = 303

 Score =  313 bits (803), Expect = 7e-84
 Identities = 143/162 (88%), Positives = 160/162 (98%)
 Frame = +1

Query: 1   EEKRKPKERRPYLASECRDLAEADRWRGEILREIGVKVAEIQNEGLGEHRLRDLNDEINK 180
           EEK+KPKERRPYLASECRDLAEAD+WR +I+REIG KVAEIQNEGLGEHRLRDLNDEINK
Sbjct: 21  EEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINK 80

Query: 181 LLRERAHWERRIVDLGGPNYSRHSAKMTDLEGNIIDVPNPSGRGPGYRYFGAAKKLPGVR 360
           L+RE++HWERRI++LGGPNY++HSAKMTDL+GNI+DVPNPSGRGPGYRYFGAAKKLPGVR
Sbjct: 81  LIREKSHWERRIIELGGPNYTKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVR 140

Query: 361 ELFEKPPEIRKRRTRYDIYKRIDASYYGYRDDEDGILQQVEG 486
           ELFEKPPE+RKRRTRYDIYKRIDASYYGYRDDEDG+L++VEG
Sbjct: 141 ELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEG 182


>emb|CBI37603.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  312 bits (799), Expect = 2e-83
 Identities = 142/162 (87%), Positives = 160/162 (98%)
 Frame = +1

Query: 1   EEKRKPKERRPYLASECRDLAEADRWRGEILREIGVKVAEIQNEGLGEHRLRDLNDEINK 180
           EEK+KPKERRPYLASECRDLAEAD+WR +I+REIG KVAEIQNEGLGEHRLRDLNDEINK
Sbjct: 21  EEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINK 80

Query: 181 LLRERAHWERRIVDLGGPNYSRHSAKMTDLEGNIIDVPNPSGRGPGYRYFGAAKKLPGVR 360
           L+RE++HWERRI++LGGPNY++HSAKMTDLEGNI+DVPNPSGRGPGYRYFGAAKKLPGVR
Sbjct: 81  LIREKSHWERRIIELGGPNYTKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVR 140

Query: 361 ELFEKPPEIRKRRTRYDIYKRIDASYYGYRDDEDGILQQVEG 486
           ELFEKPPE+RKR++RYDIYKRIDASYYGYRDDEDG+L++VEG
Sbjct: 141 ELFEKPPELRKRKSRYDIYKRIDASYYGYRDDEDGVLEKVEG 182


>ref|XP_002282621.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog isoform 1 [Vitis
           vinifera] gi|359476953|ref|XP_003631919.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 2 [Vitis
           vinifera] gi|359476955|ref|XP_003631920.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 3 [Vitis
           vinifera] gi|147773415|emb|CAN60270.1| hypothetical
           protein VITISV_029395 [Vitis vinifera]
          Length = 298

 Score =  312 bits (799), Expect = 2e-83
 Identities = 142/162 (87%), Positives = 160/162 (98%)
 Frame = +1

Query: 1   EEKRKPKERRPYLASECRDLAEADRWRGEILREIGVKVAEIQNEGLGEHRLRDLNDEINK 180
           EEK+KPKERRPYLASECRDLAEAD+WR +I+REIG KVAEIQNEGLGEHRLRDLNDEINK
Sbjct: 21  EEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINK 80

Query: 181 LLRERAHWERRIVDLGGPNYSRHSAKMTDLEGNIIDVPNPSGRGPGYRYFGAAKKLPGVR 360
           L+RE++HWERRI++LGGPNY++HSAKMTDLEGNI+DVPNPSGRGPGYRYFGAAKKLPGVR
Sbjct: 81  LIREKSHWERRIIELGGPNYTKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVR 140

Query: 361 ELFEKPPEIRKRRTRYDIYKRIDASYYGYRDDEDGILQQVEG 486
           ELFEKPPE+RKR++RYDIYKRIDASYYGYRDDEDG+L++VEG
Sbjct: 141 ELFEKPPELRKRKSRYDIYKRIDASYYGYRDDEDGVLEKVEG 182


>ref|XP_002883151.1| hypothetical protein ARALYDRAFT_479390 [Arabidopsis lyrata subsp.
           lyrata] gi|297328991|gb|EFH59410.1| hypothetical protein
           ARALYDRAFT_479390 [Arabidopsis lyrata subsp. lyrata]
          Length = 300

 Score =  310 bits (793), Expect = 1e-82
 Identities = 145/160 (90%), Positives = 157/160 (98%)
 Frame = +1

Query: 4   EKRKPKERRPYLASECRDLAEADRWRGEILREIGVKVAEIQNEGLGEHRLRDLNDEINKL 183
           EK+KPKERRP+LASECRDL+EAD+WR +ILREIG KVAEIQNEGLGEHRLRDLNDEINKL
Sbjct: 22  EKKKPKERRPFLASECRDLSEADKWRQQILREIGSKVAEIQNEGLGEHRLRDLNDEINKL 81

Query: 184 LRERAHWERRIVDLGGPNYSRHSAKMTDLEGNIIDVPNPSGRGPGYRYFGAAKKLPGVRE 363
           LRER HWERRIV+LGGPNYS+HSAKMTDLEGNIIDVPNPSGRGPGYRYFGAAKKLPGVRE
Sbjct: 82  LRERYHWERRIVELGGPNYSKHSAKMTDLEGNIIDVPNPSGRGPGYRYFGAAKKLPGVRE 141

Query: 364 LFEKPPEIRKRRTRYDIYKRIDASYYGYRDDEDGILQQVE 483
           LFEKPPE+RKR+TRYDIYKRIDASYYGYRDDEDGIL+++E
Sbjct: 142 LFEKPPELRKRKTRYDIYKRIDASYYGYRDDEDGILEKLE 181


>ref|NP_188509.1| pre-mRNA-splicing factor ISY1 [Arabidopsis thaliana]
           gi|9293904|dbj|BAB01807.1| unnamed protein product
           [Arabidopsis thaliana] gi|18086381|gb|AAL57650.1|
           AT3g18790/MVE11_17 [Arabidopsis thaliana]
           gi|19699138|gb|AAL90935.1| AT3g18790/MVE11_17
           [Arabidopsis thaliana] gi|26452139|dbj|BAC43158.1|
           unknown protein [Arabidopsis thaliana]
           gi|227202802|dbj|BAH56874.1| AT3G18790 [Arabidopsis
           thaliana] gi|332642628|gb|AEE76149.1| pre-mRNA-splicing
           factor ISY1 [Arabidopsis thaliana]
          Length = 300

 Score =  309 bits (791), Expect = 2e-82
 Identities = 146/160 (91%), Positives = 156/160 (97%)
 Frame = +1

Query: 4   EKRKPKERRPYLASECRDLAEADRWRGEILREIGVKVAEIQNEGLGEHRLRDLNDEINKL 183
           EK+KPKERRPYLASECRDLAEAD+WR +ILREIG KVAEIQNEGLGEHRLRDLNDEINKL
Sbjct: 22  EKKKPKERRPYLASECRDLAEADKWRQQILREIGSKVAEIQNEGLGEHRLRDLNDEINKL 81

Query: 184 LRERAHWERRIVDLGGPNYSRHSAKMTDLEGNIIDVPNPSGRGPGYRYFGAAKKLPGVRE 363
           LRER HWERRIV+LGG NYS+HSAKMTDLEGNIIDVPNPSGRGPGYRYFGAAKKLPGVRE
Sbjct: 82  LRERYHWERRIVELGGHNYSKHSAKMTDLEGNIIDVPNPSGRGPGYRYFGAAKKLPGVRE 141

Query: 364 LFEKPPEIRKRRTRYDIYKRIDASYYGYRDDEDGILQQVE 483
           LFEKPPE+RKR+TRYDIYKRIDASYYGYRDDEDGIL+++E
Sbjct: 142 LFEKPPELRKRKTRYDIYKRIDASYYGYRDDEDGILEKLE 181


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