BLASTX nr result
ID: Dioscorea21_contig00010093
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00010093
(934 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla... 288 1e-75
ref|XP_002300047.1| peptide deformylase [Populus trichocarpa] gi... 283 4e-74
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla... 280 3e-73
ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c... 278 1e-72
ref|NP_001043669.1| Os01g0637600 [Oryza sativa Japonica Group] g... 263 3e-68
>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
gi|296087647|emb|CBI34903.3| unnamed protein product
[Vitis vinifera]
Length = 275
Score = 288 bits (738), Expect = 1e-75
Identities = 143/178 (80%), Positives = 155/178 (87%)
Frame = +1
Query: 1 KGINTFDENLKKLADEMFDVMYKTDGIGLSAPQVGINVQLMVFNPAGERGEGEEIILVNP 180
K I+TFD+NLKKL DEMFDVMYKTDGIGLSAPQVGINVQLMVFNP GERGEGEEI+LVNP
Sbjct: 98 KLISTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNP 157
Query: 181 IVYRVSKKTVLFNEGCLSFPGIYADVERPASIKIDARDITGGRFRVNLSGLPARVFQHEF 360
V + SKK VLFNEGCLSFPGIYADVERP S+KIDARDITG RF +NLSGLPARVFQHEF
Sbjct: 158 RVNKYSKKIVLFNEGCLSFPGIYADVERPESVKIDARDITGARFMINLSGLPARVFQHEF 217
Query: 361 DHLQGVLFFDRMTEEVLSSIRSQLKALEVKYESQTGLQSPERIDDYKRRKEVAGFGRA 534
DHLQG LFFDRMTEEVL SI + L+ LE KYE +TG SPERI+ KRRK AGFG++
Sbjct: 218 DHLQGTLFFDRMTEEVLDSIHANLQDLERKYEDRTGFPSPERIETRKRRKVAAGFGKS 275
>ref|XP_002300047.1| peptide deformylase [Populus trichocarpa]
gi|222847305|gb|EEE84852.1| peptide deformylase [Populus
trichocarpa]
Length = 258
Score = 283 bits (724), Expect = 4e-74
Identities = 139/177 (78%), Positives = 155/177 (87%)
Frame = +1
Query: 1 KGINTFDENLKKLADEMFDVMYKTDGIGLSAPQVGINVQLMVFNPAGERGEGEEIILVNP 180
K I++FD+NLKKL DEMFDVMYKTDGIGLSAPQVGINVQLMVFNPA E GEG+EI+LVNP
Sbjct: 82 KRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADEHGEGDEIVLVNP 141
Query: 181 IVYRVSKKTVLFNEGCLSFPGIYADVERPASIKIDARDITGGRFRVNLSGLPARVFQHEF 360
V + SKKTVLFNEGCLSFPGIYADV+RP S+KIDARDI G RF VNLSGLPARVFQHEF
Sbjct: 142 RVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNLSGLPARVFQHEF 201
Query: 361 DHLQGVLFFDRMTEEVLSSIRSQLKALEVKYESQTGLQSPERIDDYKRRKEVAGFGR 531
DHLQG+LFFDRMTEEVL SIR L+ALE KYE +TG SPERI+ ++ +K AGFG+
Sbjct: 202 DHLQGILFFDRMTEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRLKKVAAGFGK 258
>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
sativus]
Length = 273
Score = 280 bits (717), Expect = 3e-73
Identities = 142/178 (79%), Positives = 156/178 (87%)
Frame = +1
Query: 1 KGINTFDENLKKLADEMFDVMYKTDGIGLSAPQVGINVQLMVFNPAGERGEGEEIILVNP 180
K I +FD+NLKKL EMFDVMYKTDGIGLSAPQVG+NVQLMVFN GERGEGEEI+LVNP
Sbjct: 97 KRIGSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNSVGERGEGEEIVLVNP 156
Query: 181 IVYRVSKKTVLFNEGCLSFPGIYADVERPASIKIDARDITGGRFRVNLSGLPARVFQHEF 360
VYR SKKTVLFNEGCLSFP IYADVERP SIKIDARDI+G RF VNLSGL ARVFQHEF
Sbjct: 157 KVYRYSKKTVLFNEGCLSFPMIYADVERPESIKIDARDISGTRFMVNLSGLSARVFQHEF 216
Query: 361 DHLQGVLFFDRMTEEVLSSIRSQLKALEVKYESQTGLQSPERIDDYKRRKEVAGFGRA 534
DHLQG LFFDRMT+EVL +IR QL+ALE KYE +TGL SPERI+++ RRK AGFG++
Sbjct: 217 DHLQGTLFFDRMTDEVLETIRPQLQALEKKYEDRTGLPSPERIENF-RRKVGAGFGKS 273
>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
gi|223539350|gb|EEF40941.1| polypeptide deformylase,
putative [Ricinus communis]
Length = 282
Score = 278 bits (712), Expect = 1e-72
Identities = 135/178 (75%), Positives = 155/178 (87%)
Frame = +1
Query: 1 KGINTFDENLKKLADEMFDVMYKTDGIGLSAPQVGINVQLMVFNPAGERGEGEEIILVNP 180
K I+TFD+NLKKL DEMFDVMYKTDGIGLSAPQVGINVQLMVFNP GERGEGEEI+L+NP
Sbjct: 105 KRIDTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLINP 164
Query: 181 IVYRVSKKTVLFNEGCLSFPGIYADVERPASIKIDARDITGGRFRVNLSGLPARVFQHEF 360
+ + SKK V FNEGCLSFPGIYADV RP S+KIDARDI G RF VNLSGLPARVFQHE+
Sbjct: 165 RLNKYSKKIVPFNEGCLSFPGIYADVLRPESVKIDARDINGARFTVNLSGLPARVFQHEY 224
Query: 361 DHLQGVLFFDRMTEEVLSSIRSQLKALEVKYESQTGLQSPERIDDYKRRKEVAGFGRA 534
DHL+G+LFFDRMT+EVL SIR+QL+ALE K+E +TG SPE+I+ K +K AGFG++
Sbjct: 225 DHLEGILFFDRMTDEVLDSIRAQLQALEKKFEDKTGYASPEKIETRKTKKAAAGFGKS 282
>ref|NP_001043669.1| Os01g0637600 [Oryza sativa Japonica Group]
gi|75251983|sp|Q5VNN5.1|DEF1B_ORYSJ RecName:
Full=Peptide deformylase 1B, chloroplastic;
Short=OsPDF1B; Short=PDF 1B; Flags: Precursor
gi|55297005|dbj|BAD68576.1| putative polygalacturonase
[Oryza sativa Japonica Group]
gi|55297594|dbj|BAD68940.1| putative polygalacturonase
[Oryza sativa Japonica Group]
gi|113533200|dbj|BAF05583.1| Os01g0637600 [Oryza sativa
Japonica Group] gi|164633054|gb|ABY64740.1| peptide
deformylase 1B1 [Oryza sativa Japonica Group]
gi|215741408|dbj|BAG97903.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 269
Score = 263 bits (673), Expect = 3e-68
Identities = 124/177 (70%), Positives = 151/177 (85%)
Frame = +1
Query: 1 KGINTFDENLKKLADEMFDVMYKTDGIGLSAPQVGINVQLMVFNPAGERGEGEEIILVNP 180
K INTFD+NL+ L DEMFDVMYKTDGIGLSAPQVG+NVQLMVFNPAG +GEGEEI+LVNP
Sbjct: 93 KRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPAGVKGEGEEIVLVNP 152
Query: 181 IVYRVSKKTVLFNEGCLSFPGIYADVERPASIKIDARDITGGRFRVNLSGLPARVFQHEF 360
+VY++SK+ +++ EGCLSFPGIYA+V RP ++KIDA+D+TG + +V LSGL ARVFQHEF
Sbjct: 153 VVYKMSKRLLVYEEGCLSFPGIYANVVRPDNVKIDAQDVTGAKIKVKLSGLSARVFQHEF 212
Query: 361 DHLQGVLFFDRMTEEVLSSIRSQLKALEVKYESQTGLQSPERIDDYKRRKEVAGFGR 531
DHLQG+LFFDRM+ +VL S+R LK LE KYE TGL SPE I++YK RK++ F R
Sbjct: 213 DHLQGILFFDRMSLDVLESVREGLKDLEKKYEESTGLVSPESIENYKGRKDLISFSR 269