BLASTX nr result

ID: Dioscorea21_contig00010085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010085
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC83863.1| hypothetical protein OsI_29844 [Oryza sativa Indi...    65   4e-09
gb|AAK98741.1|AC090485_20 Hypothetical protein similar to putati...    61   8e-08
gb|EEE67720.1| hypothetical protein OsJ_25400 [Oryza sativa Japo...    61   1e-07
gb|EEC82591.1| hypothetical protein OsI_27147 [Oryza sativa Indi...    61   1e-07
ref|XP_004162147.1| PREDICTED: putative ribonuclease H protein A...    60   1e-07

>gb|EEC83863.1| hypothetical protein OsI_29844 [Oryza sativa Indica Group]
           gi|222640849|gb|EEE68981.1| hypothetical protein
           OsJ_27900 [Oryza sativa Japonica Group]
          Length = 386

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/88 (38%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = -1

Query: 302 FSSKHSQSDHWIGWRNLWRIHASPRVKFFVWLLLHGRVKTYDYLNAINLGPAAPCVFCGL 123
           +SS H        WR +W   A PRV+FF WLL   R+ T   L+  N+ P A C+ C  
Sbjct: 213 YSSTHMGLPLCKNWRFIWDNRAPPRVQFFAWLLAKDRLPTKANLHKKNIVPTAGCIVCNC 272

Query: 122 VIESAKHLFYHCSKVQNIWN--RVSCIS 45
             E+A HLF  C   Q  W   R S +S
Sbjct: 273 ADETATHLFLQCQFAQEFWRALRTSVVS 300


>gb|AAK98741.1|AC090485_20 Hypothetical protein similar to putative retroelements [Oryza
           sativa Japonica Group] gi|27497213|gb|AAO17357.1|
           Putative retroelement [Oryza sativa Japonica Group]
           gi|108706160|gb|ABF93955.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
           gi|125584905|gb|EAZ25569.1| hypothetical protein
           OsJ_09395 [Oryza sativa Japonica Group]
          Length = 387

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/95 (30%), Positives = 42/95 (44%)
 Frame = -1

Query: 302 FSSKHSQSDHWIGWRNLWRIHASPRVKFFVWLLLHGRVKTYDYLNAINLGPAAPCVFCGL 123
           + S+ +  + W  W  +WR  A PRVKFF WL+   R+ T   L+   + P   C  C  
Sbjct: 213 YRSEMATFETWPPWSAIWRSAAPPRVKFFAWLMSKNRLPTRVNLHKKTILPTPTCELCNA 272

Query: 122 VIESAKHLFYHCSKVQNIWNRVSCISGYSLVFTNH 18
            +E   H+F  C      WN +  I   S +   H
Sbjct: 273 NLEDTYHIFLRCPMAAAFWNMIQIIPEISSLSDLH 307


>gb|EEE67720.1| hypothetical protein OsJ_25400 [Oryza sativa Japonica Group]
          Length = 391

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/67 (38%), Positives = 38/67 (56%)
 Frame = -1

Query: 263 WRNLWRIHASPRVKFFVWLLLHGRVKTYDYLNAINLGPAAPCVFCGLVIESAKHLFYHCS 84
           W+ +W+  A PRV+FF WLL   R+     L   N+ P+  C  C +  E+A+HLF HCS
Sbjct: 225 WKFVWKNKAPPRVQFFAWLLAKDRLPMRVNLKKKNITPSDVCEICKIAPETAEHLFLHCS 284

Query: 83  KVQNIWN 63
             +  W+
Sbjct: 285 VAKAFWD 291


>gb|EEC82591.1| hypothetical protein OsI_27147 [Oryza sativa Indica Group]
          Length = 253

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/67 (38%), Positives = 38/67 (56%)
 Frame = -1

Query: 263 WRNLWRIHASPRVKFFVWLLLHGRVKTYDYLNAINLGPAAPCVFCGLVIESAKHLFYHCS 84
           W+ +W+  A PRV+FF WLL   R+     L   N+ P+  C  C +  E+A+HLF HCS
Sbjct: 87  WKFVWKNKAPPRVQFFAWLLAKDRLPMRVNLKKKNITPSDVCEICKIAPETAEHLFLHCS 146

Query: 83  KVQNIWN 63
             +  W+
Sbjct: 147 VAKAFWD 153


>ref|XP_004162147.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 218

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
 Frame = -1

Query: 356 WVLFPRTNKNIAAVVYSHFSSKHSQSDHWIG--WRNLWRIHASPRVKFFVWLLLHGRVKT 183
           W L    +  +A++  +   +   +++   G  + NLW+     R KFFVW LLH  + T
Sbjct: 18  WTLNNNGSFTVASIKLARLPNNQDETNEDDGKIYNNLWKSTIPKRCKFFVWTLLHECINT 77

Query: 182 YDYLNA-INLGPAAP--CVFCGLVIESAKHLFYHCSKVQNIWNRVSCISGYSLVFTN 21
            D L   +      P  C+ C    E  +HLF HC     +W +V  I G  L+F N
Sbjct: 78  MDMLQRRLPTWTIKPSWCILCKAAEEDRQHLFTHCPYTTLLWKKVEVILGKPLLFPN 134


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