BLASTX nr result

ID: Dioscorea21_contig00010080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010080
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM61177.1| Contains similarity to 21 KD subunit of the Arp2/...   298   1e-78
ref|NP_564757.1| actin-related protein C3 [Arabidopsis thaliana]...   298   1e-78
ref|XP_004166260.1| PREDICTED: actin-related protein 2/3 complex...   294   1e-77
ref|XP_004139405.1| PREDICTED: actin-related protein 2/3 complex...   294   1e-77
emb|CCD74517.1| Pantothenate kinase 1 [Arabidopsis halleri subsp...   294   1e-77

>gb|AAM61177.1| Contains similarity to 21 KD subunit of the Arp2/3 protein complex
           (ARC21) [Arabidopsis thaliana]
          Length = 174

 Score =  298 bits (762), Expect = 1e-78
 Identities = 145/173 (83%), Positives = 154/173 (89%)
 Frame = +3

Query: 21  MVYHSSFVDEEGITKACGCPLLPLKSHIKGPAPVSEQDKVDIVDEAISXXXXXXXXXXXX 200
           MVYHSSFVDEEGITKACGCPLLPLKSHIKGPAP+SEQDK DIVDEAI+            
Sbjct: 1   MVYHSSFVDEEGITKACGCPLLPLKSHIKGPAPISEQDKTDIVDEAITFFRANVFFTNFD 60

Query: 201 IQSSADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGEAGFPFGGLFSL 380
           I+S ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE++PVPGE GFPF GLFSL
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSL 120

Query: 381 PQSQEEAEIFRNYLKQIREETSGRLLSCAYRPNGTPNKWWLAFAKRKFMNTIV 539
           PQSQ+EAE+FRNYLKQ+REETSGRLLS AYR NGTPNKWWLAFAKRKFMN +V
Sbjct: 121 PQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVV 173


>ref|NP_564757.1| actin-related protein C3 [Arabidopsis thaliana]
           gi|145325477|ref|NP_001077743.1| actin-related protein
           C3 [Arabidopsis thaliana] gi|107738068|gb|ABF83627.1|
           At1g60430 [Arabidopsis thaliana]
           gi|332195564|gb|AEE33685.1| actin-related protein C3
           [Arabidopsis thaliana] gi|332195565|gb|AEE33686.1|
           actin-related protein C3 [Arabidopsis thaliana]
          Length = 174

 Score =  298 bits (762), Expect = 1e-78
 Identities = 145/173 (83%), Positives = 154/173 (89%)
 Frame = +3

Query: 21  MVYHSSFVDEEGITKACGCPLLPLKSHIKGPAPVSEQDKVDIVDEAISXXXXXXXXXXXX 200
           MVYHSSFVDEEG+TKACGCPLLPLKSHIKGPAPVSEQDK DIVDEAI+            
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFD 60

Query: 201 IQSSADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGEAGFPFGGLFSL 380
           I+S ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE++PVPGE GFPF GLFSL
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSL 120

Query: 381 PQSQEEAEIFRNYLKQIREETSGRLLSCAYRPNGTPNKWWLAFAKRKFMNTIV 539
           PQSQ+EAE+FRNYLKQ+REETSGRLLS AYR NGTPNKWWLAFAKRKFMN +V
Sbjct: 121 PQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVV 173


>ref|XP_004166260.1| PREDICTED: actin-related protein 2/3 complex subunit 3-like
           [Cucumis sativus]
          Length = 223

 Score =  294 bits (753), Expect = 1e-77
 Identities = 144/173 (83%), Positives = 154/173 (89%)
 Frame = +3

Query: 24  VYHSSFVDEEGITKACGCPLLPLKSHIKGPAPVSEQDKVDIVDEAISXXXXXXXXXXXXI 203
           V+HSSFVDEEGI+KACGCPLLPLKSHIKGPAPVS+QDK DIVDEAI+            I
Sbjct: 51  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 110

Query: 204 QSSADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGEAGFPFGGLFSLP 383
           +S+ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGE+GFPF GLF +P
Sbjct: 111 KSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 170

Query: 384 QSQEEAEIFRNYLKQIREETSGRLLSCAYRPNGTPNKWWLAFAKRKFMNTIVP 542
           QS EEAE+FRNYLKQIREETSGRLLS AYR NGTPNKWWLAFAKRKFMN I+P
Sbjct: 171 QSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 223


>ref|XP_004139405.1| PREDICTED: actin-related protein 2/3 complex subunit 3-like
           [Cucumis sativus]
          Length = 224

 Score =  294 bits (753), Expect = 1e-77
 Identities = 144/173 (83%), Positives = 154/173 (89%)
 Frame = +3

Query: 24  VYHSSFVDEEGITKACGCPLLPLKSHIKGPAPVSEQDKVDIVDEAISXXXXXXXXXXXXI 203
           V+HSSFVDEEGI+KACGCPLLPLKSHIKGPAPVS+QDK DIVDEAI+            I
Sbjct: 52  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 111

Query: 204 QSSADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGEAGFPFGGLFSLP 383
           +S+ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGE+GFPF GLF +P
Sbjct: 112 KSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 171

Query: 384 QSQEEAEIFRNYLKQIREETSGRLLSCAYRPNGTPNKWWLAFAKRKFMNTIVP 542
           QS EEAE+FRNYLKQIREETSGRLLS AYR NGTPNKWWLAFAKRKFMN I+P
Sbjct: 172 QSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 224


>emb|CCD74517.1| Pantothenate kinase 1 [Arabidopsis halleri subsp. halleri]
          Length = 572

 Score =  294 bits (753), Expect = 1e-77
 Identities = 143/172 (83%), Positives = 153/172 (88%)
 Frame = +3

Query: 24  VYHSSFVDEEGITKACGCPLLPLKSHIKGPAPVSEQDKVDIVDEAISXXXXXXXXXXXXI 203
           VYHSSFVDEEGITKACGCPLLPLKSHIKGPAP+SEQDK DIVDEAI+            I
Sbjct: 400 VYHSSFVDEEGITKACGCPLLPLKSHIKGPAPISEQDKTDIVDEAITFFRANVFFTNFDI 459

Query: 204 QSSADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGEAGFPFGGLFSLP 383
           +S ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE++PVPGE GFPF GLFSLP
Sbjct: 460 KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSLP 519

Query: 384 QSQEEAEIFRNYLKQIREETSGRLLSCAYRPNGTPNKWWLAFAKRKFMNTIV 539
           QSQEEA++FRNYLKQ+REETSGRLLS AYR NGTPNKWWLAFAKRKF+N +V
Sbjct: 520 QSQEEADLFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFINVVV 571


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