BLASTX nr result

ID: Dioscorea21_contig00010060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010060
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containi...   165   3e-39
ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [S...   158   4e-37
ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containi...   154   5e-36
ref|XP_002319146.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35
gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japo...   152   3e-35

>ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
           mitochondrial-like [Brachypodium distachyon]
          Length = 474

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/111 (70%), Positives = 96/111 (86%)
 Frame = -1

Query: 411 IEPEIKHFGCMIDMLGRAGRLWEAEKLIGDLPGEVNVIVWRTLLGCCSKHGDVEMGERVM 232
           I PEIKHFGC+IDMLGRAGRL EAE++IG LP EVN IVWRTLL CCSK+G+VEMG+R M
Sbjct: 360 INPEIKHFGCIIDMLGRAGRLCEAEQVIGGLPMEVNSIVWRTLLACCSKYGEVEMGKRAM 419

Query: 231 RRILEMEKGYGGDYVILSNMLSEAGRFGDAEGIRRLMDERHALKVPGLSLV 79
           ++IL  E+  GGD+V++SNML+E GRF DAE  R+L+DER+A+KVPGL+LV
Sbjct: 420 KKILHTERESGGDFVVVSNMLTELGRFSDAERSRKLLDERNAVKVPGLALV 470


>ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
           gi|241930650|gb|EES03795.1| hypothetical protein
           SORBIDRAFT_03g037910 [Sorghum bicolor]
          Length = 894

 Score =  158 bits (400), Expect = 4e-37
 Identities = 74/111 (66%), Positives = 94/111 (84%)
 Frame = -1

Query: 411 IEPEIKHFGCMIDMLGRAGRLWEAEKLIGDLPGEVNVIVWRTLLGCCSKHGDVEMGERVM 232
           I+PEIKHFGC+IDMLGRAGRL EAE++I  LP EVNVIVWR LLGCCSK+G+VEMG+R +
Sbjct: 206 IDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAI 265

Query: 231 RRILEMEKGYGGDYVILSNMLSEAGRFGDAEGIRRLMDERHALKVPGLSLV 79
           + I ++E+  GGD+ +LSN+L+E GRF DAE  R+L+DER  +KVPGL+LV
Sbjct: 266 KMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKVPGLALV 316



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/111 (37%), Positives = 72/111 (64%)
 Frame = -1

Query: 411  IEPEIKHFGCMIDMLGRAGRLWEAEKLIGDLPGEVNVIVWRTLLGCCSKHGDVEMGERVM 232
            +EP++KH+GC++ +L RAG+L +A+  I ++P   + +VWR LLG C  HG+V + E   
Sbjct: 776  LEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVAT 835

Query: 231  RRILEMEKGYGGDYVILSNMLSEAGRFGDAEGIRRLMDERHALKVPGLSLV 79
            +++ E++    GDY++LSN+ + A R+ DA  +R+ M +    K P  S+V
Sbjct: 836  KKLSELDPSNSGDYMLLSNIYASADRWSDALNVRQWMADTAVRKSPACSVV 886


>ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
           mitochondrial-like [Vitis vinifera]
          Length = 470

 Score =  154 bits (390), Expect = 5e-36
 Identities = 74/110 (67%), Positives = 91/110 (82%), Gaps = 1/110 (0%)
 Frame = -1

Query: 411 IEPEIKHFGCMIDMLGRAGRLWEAEKLIGDLPGEV-NVIVWRTLLGCCSKHGDVEMGERV 235
           I P++KH+GC+IDMLGRAGRL EAEK+  ++P  V NV++WRTLLG CS HG+VEMG RV
Sbjct: 359 ISPDVKHYGCLIDMLGRAGRLDEAEKMALEIPDYVVNVVIWRTLLGACSFHGNVEMGARV 418

Query: 234 MRRILEMEKGYGGDYVILSNMLSEAGRFGDAEGIRRLMDERHALKVPGLS 85
            R+ILEME+ YGGDYV+LSN+ +  GRF D E +RRLMDER+A KVPGLS
Sbjct: 419 TRKILEMERKYGGDYVLLSNIFAGVGRFWDVERVRRLMDERNASKVPGLS 468


>ref|XP_002319146.1| predicted protein [Populus trichocarpa] gi|222857522|gb|EEE95069.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  153 bits (387), Expect = 1e-35
 Identities = 70/113 (61%), Positives = 95/113 (84%), Gaps = 1/113 (0%)
 Frame = -1

Query: 414 GIEPEIKHFGCMIDMLGRAGRLWEAEKLIGDLPGE-VNVIVWRTLLGCCSKHGDVEMGER 238
           G+ P+IKH+GC++DMLGR GRL EAE +  ++P E VNV++WRTLLG CS HG+VEMGER
Sbjct: 225 GVLPDIKHYGCVVDMLGRTGRLEEAENMALEIPSEIVNVVIWRTLLGACSFHGNVEMGER 284

Query: 237 VMRRILEMEKGYGGDYVILSNMLSEAGRFGDAEGIRRLMDERHALKVPGLSLV 79
           V R+I+EME+GYGGDYV++ N+ + AGR+ DAE +R+LM++R+A K+PG SLV
Sbjct: 285 VTRKIMEMERGYGGDYVLMYNIFAGAGRYEDAERLRKLMNKRNAFKLPGNSLV 337


>gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
          Length = 1031

 Score =  152 bits (384), Expect = 3e-35
 Identities = 68/104 (65%), Positives = 90/104 (86%)
 Frame = -1

Query: 411 IEPEIKHFGCMIDMLGRAGRLWEAEKLIGDLPGEVNVIVWRTLLGCCSKHGDVEMGERVM 232
           I P++KHFGC+IDMLGRAGRL EAE++I D P EVN  VWRTLLGCCSK+G+VEMGER M
Sbjct: 355 INPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTM 414

Query: 231 RRILEMEKGYGGDYVILSNMLSEAGRFGDAEGIRRLMDERHALK 100
           ++IL +E+ +GGD+V+LSNML+E  RF DAE +R+L+D+R+++K
Sbjct: 415 KKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVK 458



 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/111 (41%), Positives = 75/111 (67%)
 Frame = -1

Query: 411  IEPEIKHFGCMIDMLGRAGRLWEAEKLIGDLPGEVNVIVWRTLLGCCSKHGDVEMGERVM 232
            +EP++KH+GC++D+LGRAG+L +A + I ++P + + +VWR LLG C+ HGDV + E V 
Sbjct: 918  LEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVT 977

Query: 231  RRILEMEKGYGGDYVILSNMLSEAGRFGDAEGIRRLMDERHALKVPGLSLV 79
            +++ E+E    G+Y +LSN  + A R+ +A  +R+ M +    K PG S V
Sbjct: 978  KKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAV 1028


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