BLASTX nr result

ID: Dioscorea21_contig00010059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010059
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316180.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
emb|CBI17596.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002311257.1| predicted protein [Populus trichocarpa] gi|1...   106   2e-21
ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [G...   105   4e-21
gb|AFK35386.1| unknown [Lotus japonicus]                              105   5e-21

>ref|XP_002316180.1| predicted protein [Populus trichocarpa]
           gi|224133246|ref|XP_002327996.1| predicted protein
           [Populus trichocarpa] gi|356512333|ref|XP_003524874.1|
           PREDICTED: 60S ribosomal protein L38-like [Glycine max]
           gi|356525108|ref|XP_003531169.1| PREDICTED: 60S
           ribosomal protein L38-like [Glycine max]
           gi|356549134|ref|XP_003542952.1| PREDICTED: 60S
           ribosomal protein L38 [Glycine max]
           gi|356555492|ref|XP_003546065.1| PREDICTED: 60S
           ribosomal protein L38-like [Glycine max]
           gi|118482000|gb|ABK92931.1| unknown [Populus
           trichocarpa] gi|118483885|gb|ABK93833.1| unknown
           [Populus trichocarpa] gi|222837405|gb|EEE75784.1|
           predicted protein [Populus trichocarpa]
           gi|222865220|gb|EEF02351.1| predicted protein [Populus
           trichocarpa] gi|255626373|gb|ACU13531.1| unknown
           [Glycine max]
          Length = 69

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/69 (78%), Positives = 56/69 (81%)
 Frame = -3

Query: 459 MPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCSKYLYTLCVFDPEKADKLKQSL 280
           MPKQIHEIKDFLLTARRKDARS             VRCSKYLYTLCVFDPEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60

Query: 279 PPGLTVQDI 253
           PPGL+VQD+
Sbjct: 61  PPGLSVQDL 69


>emb|CBI17596.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/70 (77%), Positives = 56/70 (80%)
 Frame = -3

Query: 462 KMPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCSKYLYTLCVFDPEKADKLKQS 283
           KMPKQIHEIKDFLLTARRKDARS             VRCSKYLYTLCVFD EKADKLKQS
Sbjct: 58  KMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQS 117

Query: 282 LPPGLTVQDI 253
           LPPGL+VQD+
Sbjct: 118 LPPGLSVQDL 127


>ref|XP_002311257.1| predicted protein [Populus trichocarpa] gi|118487733|gb|ABK95690.1|
           unknown [Populus trichocarpa]
           gi|222851077|gb|EEE88624.1| predicted protein [Populus
           trichocarpa]
          Length = 69

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/69 (76%), Positives = 56/69 (81%)
 Frame = -3

Query: 459 MPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCSKYLYTLCVFDPEKADKLKQSL 280
           MPKQIHEIKDFLLTARRKDARS             VRCSKYLYTLCVFDPEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRRRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60

Query: 279 PPGLTVQDI 253
           PPGL+VQ++
Sbjct: 61  PPGLSVQEL 69


>ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [Glycine max]
          Length = 100

 Score =  105 bits (262), Expect = 4e-21
 Identities = 57/84 (67%), Positives = 59/84 (70%), Gaps = 5/84 (5%)
 Frame = -3

Query: 489 GRSRRDHIG-----KMPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCSKYLYTL 325
           GR R    G      MPKQIHEIKDFLLTARRKDARS             VRCSKYLYTL
Sbjct: 17  GRDRASEEGIAAKSTMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL 76

Query: 324 CVFDPEKADKLKQSLPPGLTVQDI 253
           CVFD EKADKLKQSLPPGL+VQD+
Sbjct: 77  CVFDSEKADKLKQSLPPGLSVQDV 100


>gb|AFK35386.1| unknown [Lotus japonicus]
          Length = 69

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/69 (76%), Positives = 55/69 (79%)
 Frame = -3

Query: 459 MPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCSKYLYTLCVFDPEKADKLKQSL 280
           MPKQIHEIKDFLLTARRKDARS             VRCSKY YTLCVFDPEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYPYTLCVFDPEKADKLKQSL 60

Query: 279 PPGLTVQDI 253
           PPGL+VQD+
Sbjct: 61  PPGLSVQDL 69


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