BLASTX nr result

ID: Dioscorea21_contig00010052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010052
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237163.1| uncharacterized protein LOC100527004 [Glycin...   129   2e-28
emb|CBI34354.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002278598.1| PREDICTED: UPF0548 protein At2g17695 [Vitis ...   126   2e-27
ref|XP_002327717.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
gb|ACJ85070.1| unknown [Medicago truncatula] gi|388501276|gb|AFK...   125   4e-27

>ref|NP_001237163.1| uncharacterized protein LOC100527004 [Glycine max]
           gi|255631350|gb|ACU16042.1| unknown [Glycine max]
          Length = 207

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/93 (64%), Positives = 73/93 (78%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   WISMPLQIAYVSNV--PRKNKGSFGFGSGTLHGHLLAGEERFSIEWDVNDQVWYEIFSFS 176
           W+ MPLQ+ YV+     +    SFGFGSGTLHGHLLAGEERFSIE D N+QVWYE+ SFS
Sbjct: 110 WLMMPLQVVYVNETGTAKYRTASFGFGSGTLHGHLLAGEERFSIEIDENNQVWYEVLSFS 169

Query: 177 KPANLLSSIAYPYVQLRQKLFAQQSLQALLKHV 275
           KPA++LS + YPYV LRQK FA +S +A+LKH+
Sbjct: 170 KPASILSLVGYPYVMLRQKYFANESAKAMLKHI 202


>emb|CBI34354.3| unnamed protein product [Vitis vinifera]
          Length = 229

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/94 (64%), Positives = 69/94 (73%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3   WISMPLQIAYVSNVPRKNKG--SFGFGSGTLHGHLLAGEERFSIEWDVNDQVWYEIFSFS 176
           W  MPL++ YV      NK   SFGFGSGTLHGHLLAGEERFSIE D NDQVWYE+ SFS
Sbjct: 135 WTMMPLEVVYVDEKKNANKAIASFGFGSGTLHGHLLAGEERFSIELDENDQVWYEVLSFS 194

Query: 177 KPANLLSSIAYPYVQLRQKLFAQQSLQALLKHVT 278
           KP N+LS + YPYVQ  QK FA  S  A+LKH++
Sbjct: 195 KPGNILSVLGYPYVQSMQKRFAHLSTNAVLKHLS 228


>ref|XP_002278598.1| PREDICTED: UPF0548 protein At2g17695 [Vitis vinifera]
          Length = 204

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/94 (64%), Positives = 69/94 (73%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3   WISMPLQIAYVSNVPRKNKG--SFGFGSGTLHGHLLAGEERFSIEWDVNDQVWYEIFSFS 176
           W  MPL++ YV      NK   SFGFGSGTLHGHLLAGEERFSIE D NDQVWYE+ SFS
Sbjct: 110 WTMMPLEVVYVDEKKNANKAIASFGFGSGTLHGHLLAGEERFSIELDENDQVWYEVLSFS 169

Query: 177 KPANLLSSIAYPYVQLRQKLFAQQSLQALLKHVT 278
           KP N+LS + YPYVQ  QK FA  S  A+LKH++
Sbjct: 170 KPGNILSVLGYPYVQSMQKRFAHLSTNAVLKHLS 203


>ref|XP_002327717.1| predicted protein [Populus trichocarpa] gi|222836802|gb|EEE75195.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/94 (65%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3   WISMPLQIAYV--SNVPRKNKGSFGFGSGTLHGHLLAGEERFSIEWDVNDQVWYEIFSFS 176
           W+ MPLQI YV  S   +K+  SF FG GTL GHLLAGEERFSIE D  +QVWYE+ SFS
Sbjct: 107 WVMMPLQIVYVNESRSSKKDMASFCFGGGTLQGHLLAGEERFSIEMDEKNQVWYEVLSFS 166

Query: 177 KPANLLSSIAYPYVQLRQKLFAQQSLQALLKHVT 278
           KPA+ LS I YPYVQLRQK FA QS  A++KHV+
Sbjct: 167 KPAHFLSFIGYPYVQLRQKFFAHQSSNAVVKHVS 200


>gb|ACJ85070.1| unknown [Medicago truncatula] gi|388501276|gb|AFK38704.1| unknown
           [Medicago truncatula]
          Length = 207

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/93 (64%), Positives = 74/93 (79%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   WISMPLQIAYVSNVPR-KNKG-SFGFGSGTLHGHLLAGEERFSIEWDVNDQVWYEIFSFS 176
           W+ MPLQ+ YV+     KN+G SFGFGSGTL GHLLAGEERFS+E D N+QVWYEI SFS
Sbjct: 110 WLMMPLQVVYVNETSTTKNRGASFGFGSGTLQGHLLAGEERFSVEIDENNQVWYEILSFS 169

Query: 177 KPANLLSSIAYPYVQLRQKLFAQQSLQALLKHV 275
           KPA++LS + YP+V LRQK FA +S + +LKH+
Sbjct: 170 KPAHVLSFVGYPHVMLRQKYFAHESAKVMLKHI 202


Top