BLASTX nr result

ID: Dioscorea21_contig00010045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010045
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...    71   1e-10
ref|XP_004143797.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus...    69   5e-10
ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223...    68   9e-10
gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]                        67   1e-09
gb|AEV41133.1| D1-type cyclin [Populus x canadensis]                   64   2e-08

>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera]
           gi|296086502|emb|CBI32091.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/77 (51%), Positives = 50/77 (64%)
 Frame = -1

Query: 296 DLLCNEEAETLSDQEIIMPEYTHQVECYFPEDSNESIAEFIEGEASYSPANDYLERFRSS 117
           DLLC E++  LS     +PE +  +E   P D  ESIA FIE E ++ P  DYL RFRS 
Sbjct: 11  DLLCGEDSSILSGD---LPECSSDLES--PTDIEESIAGFIEDERNFVPGFDYLARFRSH 65

Query: 116 SLDSLARQNSVSWILKV 66
           SLD+ AR+ SV+WILKV
Sbjct: 66  SLDASAREESVAWILKV 82


>ref|XP_004143797.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
           gi|449527605|ref|XP_004170800.1| PREDICTED:
           cyclin-D1-1-like [Cucumis sativus]
          Length = 335

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
 Frame = -1

Query: 314 SSSSCC----DLLCNEEAETLSDQEIIMPEYTHQVECYFPEDSNESIAEFIEGEASYSPA 147
           SSSS C     LLC+E++  +   +++  EY+  +E   P  S +SIA FIE E  + P 
Sbjct: 4   SSSSDCFIDSHLLCDEDSSGILSGDLL--EYSSDLES--PASSEDSIASFIEDERHFVPG 59

Query: 146 NDYLERFRSSSLDSLARQNSVSWILKV 66
            DYL RF+S SLDS AR +SV+WILKV
Sbjct: 60  IDYLSRFQSQSLDSSARADSVAWILKV 86


>ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223529002|gb|EEF30993.1|
           cyclin d, putative [Ricinus communis]
          Length = 386

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
 Frame = -1

Query: 314 SSSSCC-DLLCNEEA-ETLSDQEIIMPEYTHQVECYFPEDSNESIAEFIEGEASYSPAND 141
           S S C  DLLC+E++ E  S  +   PEY+  +E   P  + ESIA FIE E ++ P  D
Sbjct: 43  SCSDCFNDLLCSEDSSEIFSTGD--SPEYSSDLES--PAGTVESIASFIEDERNFVPGFD 98

Query: 140 YLERFRSSSLDSLARQNSVSWILKV 66
           YL RF+S SLD+ AR++SV+WILKV
Sbjct: 99  YLSRFQSRSLDASAREDSVAWILKV 123


>gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]
          Length = 315

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = -1

Query: 314 SSSSC-CDLLCNEEAETLSDQEIIMPEYTHQVECYFPEDSNESIAEFIEGEASYSPANDY 138
           S S C  DLLC E++  LS  +   PE ++  E  +  D ++SIAEFIE E  + P  DY
Sbjct: 4   SCSDCFSDLLCCEDSGILSGDD--RPECSYDFE--YSGDFDDSIAEFIEQERKFVPGIDY 59

Query: 137 LERFRSSSLDSLARQNSVSWILKV 66
           +ERF+S  LD+ AR+ SV+WILKV
Sbjct: 60  VERFQSQVLDASAREESVAWILKV 83


>gb|AEV41133.1| D1-type cyclin [Populus x canadensis]
          Length = 327

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -1

Query: 314 SSSSCC-DLLCNEEAETLSDQEIIMPEYTHQVECY-FPEDSNESIAEFIEGEASYSPAND 141
           S S C  DLLC E++  +   E   PE +  +E + F E+S  SIA FIE E ++ P  D
Sbjct: 2   SYSDCLSDLLCGEDSSDIFSGE--SPECSSDLESHDFVEES--SIAGFIEDERNFVPGYD 57

Query: 140 YLERFRSSSLDSLARQNSVSWILKV 66
           Y  RF+S SLD+ AR+ SV+WILKV
Sbjct: 58  YFSRFQSQSLDASAREQSVAWILKV 82


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