BLASTX nr result

ID: Dioscorea21_contig00010041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010041
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29649.3| unnamed protein product [Vitis vinifera]              222   4e-56
ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containi...   222   4e-56
emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]   222   4e-56
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi...   212   3e-53
ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containi...   212   3e-53

>emb|CBI29649.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  222 bits (565), Expect = 4e-56
 Identities = 115/167 (68%), Positives = 125/167 (74%)
 Frame = +2

Query: 62  KRRLRIEPPLHXXXXXXXXXXXXXXXXXXXXXXSTSALVGPRLNLHNRVQSLIRSGDLDS 241
           KRRLRIEPPLH                      STSALVGPRLNLHNRVQSLIR+GDLD 
Sbjct: 59  KRRLRIEPPLHALRRDPSAPRPRPDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDL 118

Query: 242 ASATARHAVFSSTRPTVFTCNAISAAMLRAGRLEDGINLHTFFFVQSNLVPNVVSYNILI 421
           ASATAR +VFS+TRPTVFTCNAI AAM R  R +D I L  FFF QSN+VPN+VSYN+LI
Sbjct: 119 ASATARQSVFSNTRPTVFTCNAIIAAMYRNKRFDDAIALFQFFFNQSNIVPNIVSYNVLI 178

Query: 422 NTFCEAGNVDEALKVYQHILATAPFSPSAVTYRHLTKGLIDSNRIGE 562
           NT C+AG VD  L +Y+HILA APFSPS VTYRHLTKGLIDS RIGE
Sbjct: 179 NTHCDAGRVDVGLDIYRHILANAPFSPSPVTYRHLTKGLIDSGRIGE 225


>ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Vitis vinifera]
          Length = 627

 Score =  222 bits (565), Expect = 4e-56
 Identities = 115/167 (68%), Positives = 125/167 (74%)
 Frame = +2

Query: 62  KRRLRIEPPLHXXXXXXXXXXXXXXXXXXXXXXSTSALVGPRLNLHNRVQSLIRSGDLDS 241
           KRRLRIEPPLH                      STSALVGPRLNLHNRVQSLIR+GDLD 
Sbjct: 59  KRRLRIEPPLHALRRDPSAPRPRPDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDL 118

Query: 242 ASATARHAVFSSTRPTVFTCNAISAAMLRAGRLEDGINLHTFFFVQSNLVPNVVSYNILI 421
           ASATAR +VFS+TRPTVFTCNAI AAM R  R +D I L  FFF QSN+VPN+VSYN+LI
Sbjct: 119 ASATARQSVFSNTRPTVFTCNAIIAAMYRNKRFDDAIALFQFFFNQSNIVPNIVSYNVLI 178

Query: 422 NTFCEAGNVDEALKVYQHILATAPFSPSAVTYRHLTKGLIDSNRIGE 562
           NT C+AG VD  L +Y+HILA APFSPS VTYRHLTKGLIDS RIGE
Sbjct: 179 NTHCDAGRVDVGLDIYRHILANAPFSPSPVTYRHLTKGLIDSGRIGE 225


>emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]
          Length = 627

 Score =  222 bits (565), Expect = 4e-56
 Identities = 115/167 (68%), Positives = 125/167 (74%)
 Frame = +2

Query: 62  KRRLRIEPPLHXXXXXXXXXXXXXXXXXXXXXXSTSALVGPRLNLHNRVQSLIRSGDLDS 241
           KRRLRIEPPLH                      STSALVGPRLNLHNRVQSLIR+GDLD 
Sbjct: 59  KRRLRIEPPLHALRRDPSAPRPRPDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDL 118

Query: 242 ASATARHAVFSSTRPTVFTCNAISAAMLRAGRLEDGINLHTFFFVQSNLVPNVVSYNILI 421
           ASATAR +VFS+TRPTVFTCNAI AAM R  R +D I L  FFF QSN+VPN+VSYN+LI
Sbjct: 119 ASATARQSVFSNTRPTVFTCNAIIAAMYRNKRFDDAIALFQFFFNQSNIVPNIVSYNVLI 178

Query: 422 NTFCEAGNVDEALKVYQHILATAPFSPSAVTYRHLTKGLIDSNRIGE 562
           NT C+AG VD  L +Y+HILA APFSPS VTYRHLTKGLIDS RIGE
Sbjct: 179 NTHCDAGRVDVGLDIYRHILANAPFSPSPVTYRHLTKGLIDSGRIGE 225


>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 871

 Score =  212 bits (540), Expect = 3e-53
 Identities = 113/167 (67%), Positives = 124/167 (74%)
 Frame = +2

Query: 62  KRRLRIEPPLHXXXXXXXXXXXXXXXXXXXXXXSTSALVGPRLNLHNRVQSLIRSGDLDS 241
           KRRLRIEPPLH                      STSALVGPRLNLHNRVQSLIR+GDLD+
Sbjct: 42  KRRLRIEPPLHALRRDNYPPPQRDPNAPRLPD-STSALVGPRLNLHNRVQSLIRAGDLDA 100

Query: 242 ASATARHAVFSSTRPTVFTCNAISAAMLRAGRLEDGINLHTFFFVQSNLVPNVVSYNILI 421
           AS+ ARH+VFS+TRPTVFTCNAI AAM RA R  D I L  FFF QSN+VPNVVSYN LI
Sbjct: 101 ASSVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVPNVVSYNNLI 160

Query: 422 NTFCEAGNVDEALKVYQHILATAPFSPSAVTYRHLTKGLIDSNRIGE 562
           N  C+ G VD  L+VY+HI+A APFSPSAVTYRHLTKGLID+ RI E
Sbjct: 161 NAHCDEGRVDVGLEVYRHIIANAPFSPSAVTYRHLTKGLIDAGRIEE 207


>ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Glycine max]
          Length = 861

 Score =  212 bits (540), Expect = 3e-53
 Identities = 111/167 (66%), Positives = 127/167 (76%)
 Frame = +2

Query: 62  KRRLRIEPPLHXXXXXXXXXXXXXXXXXXXXXXSTSALVGPRLNLHNRVQSLIRSGDLDS 241
           KRRLRIEPPL+                      STSALVGPRL+LHNRVQSLIR+GDLD+
Sbjct: 42  KRRLRIEPPLNAIRPPPQQGPPRDPNAPRLPD-STSALVGPRLSLHNRVQSLIRAGDLDA 100

Query: 242 ASATARHAVFSSTRPTVFTCNAISAAMLRAGRLEDGINLHTFFFVQSNLVPNVVSYNILI 421
           ASA ARH+VFS+TRPTVFTCNAI AAM R+GR E+ I L  FFF QSN+VPN+VSYN +I
Sbjct: 101 ASAIARHSVFSATRPTVFTCNAIIAAMYRSGRYEEAIGLFQFFFKQSNIVPNIVSYNNVI 160

Query: 422 NTFCEAGNVDEALKVYQHILATAPFSPSAVTYRHLTKGLIDSNRIGE 562
           NT C+ G VD AL+VY+H+LA APFSPS VTYRHLTKGLI S+RI E
Sbjct: 161 NTHCDEGRVDVALEVYRHVLANAPFSPSPVTYRHLTKGLIQSSRISE 207


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