BLASTX nr result

ID: Dioscorea21_contig00010040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010040
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|1...    68   9e-10
ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_003602547.1| Photosystem I reaction center subunit N [Med...    63   3e-08
ref|XP_002526638.1| Photosystem I reaction center subunit N, chl...    62   5e-08
gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]...    62   5e-08

>ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|118486634|gb|ABK95154.1|
           unknown [Populus trichocarpa]
           gi|222855698|gb|EEE93245.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
 Frame = +2

Query: 86  MAAINSSVLACNYVLS--SGSDMSLKLAS---ISSPPVTNPKLPVIKAQQAHTFFEPKKT 250
           MAA+NSSVLACNY +S    S+++ K+ S   ++SP V+ PKLP+I+AQQA    + K+ 
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASPVVSGPKLPIIRAQQARA--DSKEM 58

Query: 251 KGSEGRR--VXXXXXXXXXXXXXXXXXNASIFDEYLEKS 361
           K SEGRR  +                 NA + ++YLEKS
Sbjct: 59  KASEGRRAALVYLAATLFTSAAAAASANAGVIEDYLEKS 97


>ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|222852818|gb|EEE90365.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
 Frame = +2

Query: 86  MAAINSSVLACNYVLS--SGSDMSLKLAS---ISSPPVTNPKLPVIKAQQAHTFFEPKKT 250
           MAA+NSSVLACNY +S    S+++ K+ S   ++S  V+ PKLPVI+AQQ  T  + ++ 
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVSGPKLPVIRAQQ--TRADSREM 58

Query: 251 KGSEGRR--VXXXXXXXXXXXXXXXXXNASIFDEYLEKS 361
           K SEGRR  +                 NA + +EYLEKS
Sbjct: 59  KASEGRRAAMVYLAATLFTSAAAASSANAGVIEEYLEKS 97


>ref|XP_003602547.1| Photosystem I reaction center subunit N [Medicago truncatula]
           gi|355491595|gb|AES72798.1| Photosystem I reaction
           center subunit N [Medicago truncatula]
           gi|388492560|gb|AFK34346.1| unknown [Medicago
           truncatula]
          Length = 172

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
 Frame = +2

Query: 86  MAAINSSVLACNYVLSSGSDMSLKLASI---SSPPVTNPKLPVIKAQQAHTFFEPKKTKG 256
           MAA+NSSVLAC+Y + SGS+++ KL S+   +SP V+  KLP+IKAQQ     E K+++ 
Sbjct: 1   MAAMNSSVLACSYAI-SGSELNAKLISVPSAASPGVSGIKLPLIKAQQVR-IPEAKESRA 58

Query: 257 SEGRR----VXXXXXXXXXXXXXXXXXNASIFDEYLEKS 361
           S+GRR    +                 NA + +EYLEKS
Sbjct: 59  SDGRRNALALLAATLFTTAVSASNSSANAGVIEEYLEKS 97


>ref|XP_002526638.1| Photosystem I reaction center subunit N, chloroplast precursor,
           putative [Ricinus communis] gi|223534030|gb|EEF35750.1|
           Photosystem I reaction center subunit N, chloroplast
           precursor, putative [Ricinus communis]
          Length = 169

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
 Frame = +2

Query: 86  MAAINSSVLACNYVLSSGSDMSL-KLASISS---PPVTNPKLPVIKAQQAHTFFEPKKTK 253
           MAA+NSSVLACNY +S  +   L KLAS+ S   P V+ PKLPVI+AQ+A    +P    
Sbjct: 1   MAAMNSSVLACNYAISGTASSELSKLASVPSAVFPTVSGPKLPVIRAQRA----KPASDS 56

Query: 254 GSEGRR--VXXXXXXXXXXXXXXXXXNASIFDEYLEKS 361
            ++GRR  +                 NA + +EYLEKS
Sbjct: 57  KADGRRAAMLCLAATLFTTAAAVSSANAGVIEEYLEKS 94


>gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118489284|gb|ABK96447.1| unknown [Populus trichocarpa
           x Populus deltoides]
          Length = 172

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
 Frame = +2

Query: 86  MAAINSSVLACNYVLS--SGSDMSLKLAS---ISSPPVTNPKLPVIKAQQAHTFFEPKKT 250
           MAA+NSSVLACNY +S    S+++ K+ S   ++S  V  PKLPVI+AQQ  T  + ++ 
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVCGPKLPVIRAQQ--TRADSREM 58

Query: 251 KGSEGRR--VXXXXXXXXXXXXXXXXXNASIFDEYLEKS 361
           K SEGRR  +                 NA + +EYLEKS
Sbjct: 59  KASEGRRAAMVYLAATLFTSAAAASSANAGVIEEYLEKS 97


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