BLASTX nr result
ID: Dioscorea21_contig00010037
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00010037
(1036 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu... 391 e-106
ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i... 386 e-105
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i... 386 e-105
ref|NP_001045340.1| Os01g0938200 [Oryza sativa Japonica Group] g... 377 e-102
gb|AFW84007.1| hypothetical protein ZEAMMB73_397161 [Zea mays] 374 e-101
>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
gi|223540085|gb|EEF41662.1| RNA binding protein, putative
[Ricinus communis]
Length = 436
Score = 391 bits (1005), Expect = e-106
Identities = 199/295 (67%), Positives = 229/295 (77%), Gaps = 1/295 (0%)
Frame = -1
Query: 1036 GCAFLKYETKEQALAALEALNGKYRMEGSSVPLVVKWADTEKERQVRRAQKAQSYASNIP 857
GCAFLKYETKEQALAALEA+NGK++MEGSSVPLVVKWADTEKERQ RRAQK QS ASN+P
Sbjct: 144 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKVQSQASNLP 203
Query: 856 NTNSIQQPSLFGALPMGYIPPYNGFGYQAHGTYGLMQYPIPSMQNPASFHNLLPPANQVN 677
N +S Q PSLFGALPMGY+P YNG+GYQA GTYGLM Y +P +Q+ +FH+++PP NQ N
Sbjct: 204 NADS-QHPSLFGALPMGYVPQYNGYGYQAPGTYGLMPYRLPPLQSQPAFHSIIPPVNQGN 262
Query: 676 ALRG-ISPEHSPSVVHRNLPATQIAGYVGSAYPGVPGLQYPLTYPGGLMSQRNLGNSHGM 500
ALRG + P+ PS+ RN A A YVGSAYP VPG+QYP+ YPGG+MS R L +S G
Sbjct: 263 ALRGGVRPDLGPSMGPRNY-ALPPASYVGSAYPAVPGIQYPMAYPGGMMSPRPLSSSPGA 321
Query: 499 AQPINVNXXXXXXXXXXXXSGGQLEGPPGANLFIYHIPQEYGDQELANAFQRFGRVLSAK 320
P + SGGQLEGPPG+NLFIYHIPQE+GDQELA+AFQ +G+VLSAK
Sbjct: 322 VSPTVGSSNSATSSGVSSSSGGQLEGPPGSNLFIYHIPQEFGDQELASAFQPYGKVLSAK 381
Query: 319 VFVDKATGVSKCFGFVSYESPASAQAAINVMNGFXXXXXXXXXXXKRDNKQSKPY 155
VFVDKATGVSKCFGFVSY+SP +AQ AIN+MNG KRDNKQSKPY
Sbjct: 382 VFVDKATGVSKCFGFVSYDSPTAAQTAINMMNGCQLGGKKLKVQLKRDNKQSKPY 436
>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis vinifera]
Length = 447
Score = 386 bits (991), Expect = e-105
Identities = 194/295 (65%), Positives = 230/295 (77%), Gaps = 1/295 (0%)
Frame = -1
Query: 1036 GCAFLKYETKEQALAALEALNGKYRMEGSSVPLVVKWADTEKERQVRRAQKAQSYASNIP 857
GCAFLKYETKEQALAALEA+NGK++MEGSSVPLVVKWADTEKERQ R+AQKAQS ASN+P
Sbjct: 154 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLP 213
Query: 856 NTNSIQQPSLFGALPMGYIPPYNGFGYQAHGTYGLMQYPIPSMQNPASFHNLLPPANQVN 677
+ +S Q PSLFGALP+GY+PPYNG+GYQA G YGLMQY +P MQ+ A+FHN++P NQ +
Sbjct: 214 SADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGS 273
Query: 676 ALRGISPEHSPSVVHRNLPATQIAGYVGSAYPGVPGLQYPLTYPGGLMSQRNLGNSHGMA 497
A+R I+P+ + +V RN A A Y+GSAYP +PGLQYP+ Y GG+MS + L S G
Sbjct: 274 AMRAIAPDLARAVAPRNY-AVPSASYMGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSR 332
Query: 496 QPINVNXXXXXXXXXXXXSGGQLEGPPGANLFIYHIPQEYGDQELANAFQRFGRVLSAKV 317
P + SGGQ+EGPPGANLFIYHIPQE+GD ELA+AFQ+FGRVLSAKV
Sbjct: 333 PPAMMTSNSPTNSGAGASSGGQVEGPPGANLFIYHIPQEFGDHELAHAFQQFGRVLSAKV 392
Query: 316 FVDKATGVSKCFGFVSYESPASAQAAINVMNGFXXXXXXXXXXXKRD-NKQSKPY 155
FVDKATG SKCFGFVSY+SPASAQ+AI++MNG KRD NKQ+KPY
Sbjct: 393 FVDKATGASKCFGFVSYDSPASAQSAISMMNGCQLGGKKLKVQLKRDNNKQNKPY 447
>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis vinifera]
gi|296086641|emb|CBI32276.3| unnamed protein product
[Vitis vinifera]
Length = 437
Score = 386 bits (991), Expect = e-105
Identities = 194/295 (65%), Positives = 230/295 (77%), Gaps = 1/295 (0%)
Frame = -1
Query: 1036 GCAFLKYETKEQALAALEALNGKYRMEGSSVPLVVKWADTEKERQVRRAQKAQSYASNIP 857
GCAFLKYETKEQALAALEA+NGK++MEGSSVPLVVKWADTEKERQ R+AQKAQS ASN+P
Sbjct: 144 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLP 203
Query: 856 NTNSIQQPSLFGALPMGYIPPYNGFGYQAHGTYGLMQYPIPSMQNPASFHNLLPPANQVN 677
+ +S Q PSLFGALP+GY+PPYNG+GYQA G YGLMQY +P MQ+ A+FHN++P NQ +
Sbjct: 204 SADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGS 263
Query: 676 ALRGISPEHSPSVVHRNLPATQIAGYVGSAYPGVPGLQYPLTYPGGLMSQRNLGNSHGMA 497
A+R I+P+ + +V RN A A Y+GSAYP +PGLQYP+ Y GG+MS + L S G
Sbjct: 264 AMRAIAPDLARAVAPRNY-AVPSASYMGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSR 322
Query: 496 QPINVNXXXXXXXXXXXXSGGQLEGPPGANLFIYHIPQEYGDQELANAFQRFGRVLSAKV 317
P + SGGQ+EGPPGANLFIYHIPQE+GD ELA+AFQ+FGRVLSAKV
Sbjct: 323 PPAMMTSNSPTNSGAGASSGGQVEGPPGANLFIYHIPQEFGDHELAHAFQQFGRVLSAKV 382
Query: 316 FVDKATGVSKCFGFVSYESPASAQAAINVMNGFXXXXXXXXXXXKRD-NKQSKPY 155
FVDKATG SKCFGFVSY+SPASAQ+AI++MNG KRD NKQ+KPY
Sbjct: 383 FVDKATGASKCFGFVSYDSPASAQSAISMMNGCQLGGKKLKVQLKRDNNKQNKPY 437
>ref|NP_001045340.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|20160777|dbj|BAB89718.1| putative ribonucleoprotein
[Oryza sativa Japonica Group] gi|20161317|dbj|BAB90241.1|
putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113534871|dbj|BAF07254.1| Os01g0938200 [Oryza sativa
Japonica Group] gi|215704529|dbj|BAG94162.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218189701|gb|EEC72128.1| hypothetical protein
OsI_05123 [Oryza sativa Indica Group]
gi|222619840|gb|EEE55972.1| hypothetical protein
OsJ_04706 [Oryza sativa Japonica Group]
Length = 460
Score = 377 bits (967), Expect = e-102
Identities = 192/295 (65%), Positives = 226/295 (76%), Gaps = 1/295 (0%)
Frame = -1
Query: 1036 GCAFLKYETKEQALAALEALNGKYRMEGSSVPLVVKWADTEKERQVRRAQKAQSYASNIP 857
GCAFLKYETKEQA+AA+EALNGK+++EGSSVPLVVKWADTEKERQ R+AQKAQ +SN+P
Sbjct: 170 GCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQLQSSNMP 229
Query: 856 NTNSIQQPSLFGALPMGYIPPYNGFGYQAHGTYGLMQYPIPSMQNPASFHNLLPPANQVN 677
+ + +QQ SLFGAL MGY+P YNGFGYQ GTYGLMQYP+ MQN A+F N++ P NQ N
Sbjct: 230 SASPMQQSSLFGALQMGYMPQYNGFGYQPPGTYGLMQYPLSPMQNQATFPNMVQPVNQGN 289
Query: 676 ALRGISPEHSPSVVHRNLPATQIAGYVGSAYPGVPGLQYPLTYPGGLMSQRNLGNSHGMA 497
++RG++PE SP+ V R+ A Q++ S YP VPG+QY +YPGGLM+ R GNS
Sbjct: 290 SIRGVNPELSPNSVPRSFNAMQLS----SPYPPVPGVQYAGSYPGGLMNNRPFGNSFSSI 345
Query: 496 QPINVNXXXXXXXXXXXXSGGQLEGPPGANLFIYHIPQEYGDQELANAFQRFGRVLSAKV 317
+ VN GGQ+EGPPGANLFIYHIPQ+YGDQ+L+NAFQRFGRVLSAKV
Sbjct: 346 KVPIVNANSPASSSPSSNPGGQIEGPPGANLFIYHIPQDYGDQDLSNAFQRFGRVLSAKV 405
Query: 316 FVDKATGVSKCFGFVSYESPASAQAAINVMNGFXXXXXXXXXXXKRDN-KQSKPY 155
FVDKATG SKCFGFVSY+SPASAQAAI VMNGF KRDN K SKP+
Sbjct: 406 FVDKATGSSKCFGFVSYDSPASAQAAIGVMNGFQLGSKKLKVQLKRDNSKHSKPF 460
>gb|AFW84007.1| hypothetical protein ZEAMMB73_397161 [Zea mays]
Length = 455
Score = 374 bits (960), Expect = e-101
Identities = 190/298 (63%), Positives = 226/298 (75%), Gaps = 4/298 (1%)
Frame = -1
Query: 1036 GCAFLKYETKEQALAALEALNGKYRMEGSSVPLVVKWADTEKERQVRRAQKAQSYASNIP 857
GCAF+KY+TK+QALAA+EALNGK+++EGSSVPLVVKWADTEKERQ R+AQKAQS S+IP
Sbjct: 162 GCAFIKYQTKDQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQSQLSHIP 221
Query: 856 NTNSIQQ-PSLFGALPMGYIPPYNGFGYQAHGTYGLMQYPIPSMQNPASFHNLLPPANQV 680
N + +QQ S+FGAL MGY+P YNGFGYQ GTYGLMQYP+ MQN F N++ P NQ
Sbjct: 222 NASPMQQHSSVFGALQMGYMPQYNGFGYQPPGTYGLMQYPLSPMQNQGPFQNMVQPLNQG 281
Query: 679 NALRGISPEHSPSVVHRNLPATQIAGYVGSAYPGVPGLQYPLTYPGGLMSQRNLGNSHGM 500
N++RG++PE SPS V R+ A Q+ GS YP +PG+QYP +YPGG M R+LGNSH
Sbjct: 282 NSIRGVNPEVSPSSVQRSFNAMQL----GSPYPAMPGMQYPGSYPGGPMGNRHLGNSHNP 337
Query: 499 AQPINVNXXXXXXXXXXXXSGGQLEGPPGANLFIYHIPQEYGDQELANAFQRFGRVLSAK 320
+ N N +GGQ+EGPPGANLFIYHIPQEYGDQEL++AFQ FGRV+SAK
Sbjct: 338 IKAPNSNANSTVSSSPSSNAGGQVEGPPGANLFIYHIPQEYGDQELSSAFQSFGRVVSAK 397
Query: 319 VFVDKATGVSKCFGFVSYESPASAQAAINVMNGFXXXXXXXXXXXKRDNK---QSKPY 155
VFVDKATGVSKCFGFVSY+SPASAQAAIN MNG+ KR+N SKP+
Sbjct: 398 VFVDKATGVSKCFGFVSYDSPASAQAAINRMNGYQLGGKKLKVQLKRENNTKHSSKPF 455