BLASTX nr result

ID: Dioscorea21_contig00010014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010014
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   138   2e-30
ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   137   5e-30
ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   135   1e-29
ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   135   2e-29
ref|XP_002520726.1| potassium channel regulatory factor, putativ...   134   4e-29

>ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like [Cucumis sativus]
           gi|449491488|ref|XP_004158914.1| PREDICTED:
           pre-mRNA-splicing factor 18-like [Cucumis sativus]
          Length = 420

 Score =  138 bits (348), Expect = 2e-30
 Identities = 69/89 (77%), Positives = 79/89 (88%)
 Frame = +3

Query: 555 SDEQRIDDLVLPRHEVIRRLRFLKQPITLFGEDDDARLDRLKLTLKSGVFDVDSDMTEGQ 734
           +DEQ ID+LVLPR EVIRRLRFLKQPITLFGEDDDARLDRLK  LK+G+F+VDSD+TEGQ
Sbjct: 96  TDEQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQ 155

Query: 735 TNDFLRDIYELRKRQKAGSLLHDRAKHKR 821
           TNDFLRDI ELRKRQK G +L +R + K+
Sbjct: 156 TNDFLRDIAELRKRQKTG-ILSERKRQKK 183


>ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 411

 Score =  137 bits (344), Expect = 5e-30
 Identities = 69/88 (78%), Positives = 78/88 (88%)
 Frame = +3

Query: 555 SDEQRIDDLVLPRHEVIRRLRFLKQPITLFGEDDDARLDRLKLTLKSGVFDVDSDMTEGQ 734
           +DEQ ID+LVLP+ EVIRRLRFLKQP+TLFGEDDDARLDRLK  LK+GVF+VDSDMTEGQ
Sbjct: 87  TDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEVDSDMTEGQ 146

Query: 735 TNDFLRDIYELRKRQKAGSLLHDRAKHK 818
           TNDFLRDI ELRKRQK G +L +R + K
Sbjct: 147 TNDFLRDIAELRKRQKTG-ILGERKRQK 173


>ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like [Vitis vinifera]
          Length = 412

 Score =  135 bits (340), Expect = 1e-29
 Identities = 67/86 (77%), Positives = 77/86 (89%)
 Frame = +3

Query: 555 SDEQRIDDLVLPRHEVIRRLRFLKQPITLFGEDDDARLDRLKLTLKSGVFDVDSDMTEGQ 734
           +DEQ+ID++VLP+ EVIRRLRFLKQPITLFGEDD ARLDRLK  LK+G+F+VDSDMTEGQ
Sbjct: 89  TDEQKIDEMVLPKQEVIRRLRFLKQPITLFGEDDTARLDRLKYVLKAGIFEVDSDMTEGQ 148

Query: 735 TNDFLRDIYELRKRQKAGSLLHDRAK 812
           TNDFLRDI ELRKRQK G +L DR +
Sbjct: 149 TNDFLRDIAELRKRQKTG-ILSDRKR 173


>ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 413

 Score =  135 bits (339), Expect = 2e-29
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = +3

Query: 555 SDEQRIDDLVLPRHEVIRRLRFLKQPITLFGEDDDARLDRLKLTLKSGVFDVDSDMTEGQ 734
           ++EQ ID+LVLP+ EVIRRLRFLKQP+TLFGEDDDARLDRLK  LK+GVF+VDSDMTEGQ
Sbjct: 88  TNEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEVDSDMTEGQ 147

Query: 735 TNDFLRDIYELRKRQKAGSLLHDRAKHK 818
           TNDFLRDI ELRKRQK G +L +R + K
Sbjct: 148 TNDFLRDIAELRKRQKTG-ILGERKRQK 174


>ref|XP_002520726.1| potassium channel regulatory factor, putative [Ricinus communis]
           gi|223540111|gb|EEF41688.1| potassium channel regulatory
           factor, putative [Ricinus communis]
          Length = 417

 Score =  134 bits (336), Expect = 4e-29
 Identities = 65/88 (73%), Positives = 77/88 (87%)
 Frame = +3

Query: 555 SDEQRIDDLVLPRHEVIRRLRFLKQPITLFGEDDDARLDRLKLTLKSGVFDVDSDMTEGQ 734
           ++EQ ID+L+LP+ EVIRRLRFLKQPITLFGEDDDARLDRLK  LK+G+F+VDSDMTEGQ
Sbjct: 92  TNEQNIDNLILPKQEVIRRLRFLKQPITLFGEDDDARLDRLKHVLKAGIFEVDSDMTEGQ 151

Query: 735 TNDFLRDIYELRKRQKAGSLLHDRAKHK 818
           TNDFLRDI ELRKRQK+G +   + K +
Sbjct: 152 TNDFLRDIAELRKRQKSGIVSERKRKDR 179


Top