BLASTX nr result
ID: Dioscorea21_contig00010008
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00010008
(2863 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein lig... 829 0.0
emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera] 813 0.0
ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group] g... 810 0.0
gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indi... 809 0.0
ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|2... 801 0.0
>ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
[Vitis vinifera] gi|296081404|emb|CBI16837.3| unnamed
protein product [Vitis vinifera]
Length = 534
Score = 829 bits (2141), Expect = 0.0
Identities = 418/560 (74%), Positives = 464/560 (82%), Gaps = 1/560 (0%)
Frame = -3
Query: 1886 MDATTSGATPPIQYHNIIDQPLS-LITPLQQTFQRLQRHCFGNLTPGEFPLAANPSIVLH 1710
MDAT SG TP +QYHNI DQP++ ++T TFQR QRHCFG+ +PGEFPLAANPSIVLH
Sbjct: 1 MDATRSG-TPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLH 59
Query: 1709 VLTACDLEPEDLAHLEATCSFFKQPANFAPDFELSIAELAALDMCQKRAIFKPLSLEERD 1530
VLTAC+LEP+DLA LEATCSFF+QPA+FAPDFELSI+ELAALDMC KRAIF+P+ LEER+
Sbjct: 60 VLTACNLEPQDLAKLEATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMMLEERE 119
Query: 1529 VLKQRCGGSWKLVLRYLLAGEVCCRREKSQAIAGPGHSIAVTSKGAVYTFGSNNSGQLGH 1350
VLKQRCGGSWKLVLR+LLAGE CCRREKSQAIAGPGHSIAVT KGAVY+FGSN+SGQLGH
Sbjct: 120 VLKQRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGH 179
Query: 1349 GTLEEEWRPRLIXXXXXXXXXXXXXXXXXXXXXXXXXRSLXXXXXXXXXXXXXRTMLISD 1170
GT +EEWRPR I RSL RTMLISD
Sbjct: 180 GTTDEEWRPRQI-------------------------RSLEGIRIIQAAAGAGRTMLISD 214
Query: 1169 AGRVYAFGKDSFGEAEYGMQGSKLVTTPQPVESLKDIFVVQAAIGNFFTAVLSREGRVYT 990
AG+VYAFGKDSFGEAEYG+QG+KLVTTPQ VESLK+IFVVQAAIGNFFTAVLSREGRVYT
Sbjct: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
Query: 989 FSWGSDATLGHQTDSNDLEPHQLMGPLEHIPVVQIAAGYCYLLALTCQPSGMSVYSVXXX 810
FSWG+DA LGHQT++NDLEPH L+G LE+IPVVQIAAGYCYLLAL CQP+GMSVYSV
Sbjct: 275 FSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCG 334
Query: 809 XXXXXXXGSRTDERYPRLIERFQALNLQPXXXXXXXXXXXXVGRDGRVCTWGWGRYGCLG 630
G+RTDE++PRLIE+F+ LNLQP VGRDGRVCTWGWGRYGCLG
Sbjct: 335 LGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLG 394
Query: 629 HGNEECESAPKVVESLNKIKAVHVATGDYTTFVVSQDGGVYSFGCGESSSLGHATAIDGQ 450
HGNEECES PKVVE+L +KAVHVATGDYTTFVVS DG VYSFGCGESSSLGH DGQ
Sbjct: 395 HGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQ 454
Query: 449 ANRHANVLSPQLVTSLKQIKEKVVQISLTNSIYWNAHTFALTDSGNLYAFGAGDKGQLGI 270
NRHAN+LSP+LVTSLKQIKE++VQISLTNSIYWNAHTFALT++G LYAFGAGDKGQLG+
Sbjct: 455 GNRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGV 514
Query: 269 ELLAQQSERGDPERVDIDLS 210
EL+A Q+ERG+PERVDIDLS
Sbjct: 515 ELVANQTERGNPERVDIDLS 534
>emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
Length = 541
Score = 813 bits (2099), Expect = 0.0
Identities = 412/556 (74%), Positives = 457/556 (82%), Gaps = 3/556 (0%)
Frame = -3
Query: 1886 MDATTSGATPPIQYHNIIDQPLS-LITPLQQTFQRLQRHCFGNLTPGEFPLAANPSIVLH 1710
MDAT SG TP +QYHNI DQP++ ++T TFQR QRHCFG+ +PGEFPLAANPSIVLH
Sbjct: 1 MDATRSG-TPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLH 59
Query: 1709 VLTACDLEPEDLAHLEA--TCSFFKQPANFAPDFELSIAELAALDMCQKRAIFKPLSLEE 1536
VLTAC+LEP+DLA LEA TCSFF+QPA+FAPDFELSI+ELAALDMC KRAIF+P+ LEE
Sbjct: 60 VLTACNLEPQDLAKLEASATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMXLEE 119
Query: 1535 RDVLKQRCGGSWKLVLRYLLAGEVCCRREKSQAIAGPGHSIAVTSKGAVYTFGSNNSGQL 1356
R+VLKQRCGGSWKLVLR+LLAGE CCRREKSQAIAGPGHSIAVT KGAVY+FGSN+SGQL
Sbjct: 120 REVLKQRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQL 179
Query: 1355 GHGTLEEEWRPRLIXXXXXXXXXXXXXXXXXXXXXXXXXRSLXXXXXXXXXXXXXRTMLI 1176
GHGT +EEWRPR I RSL RTMLI
Sbjct: 180 GHGTTDEEWRPRQI-------------------------RSLEGIRIIQAAAGAGRTMLI 214
Query: 1175 SDAGRVYAFGKDSFGEAEYGMQGSKLVTTPQPVESLKDIFVVQAAIGNFFTAVLSREGRV 996
SDAG+VYAFGKDSFGEAEYG+QG+KLVTTPQ VESLK+IFVVQAAIGNFFTAVLSREGRV
Sbjct: 215 SDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 274
Query: 995 YTFSWGSDATLGHQTDSNDLEPHQLMGPLEHIPVVQIAAGYCYLLALTCQPSGMSVYSVX 816
YTFSWG+DA LGHQT++NDLEPH L+G LE+IPVVQIAAGYCYLLAL CQP+GMSVYSV
Sbjct: 275 YTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVG 334
Query: 815 XXXXXXXXXGSRTDERYPRLIERFQALNLQPXXXXXXXXXXXXVGRDGRVCTWGWGRYGC 636
G+RTDE++PRLIE+FQ LNLQP VGRDGRVCTWGWGRYGC
Sbjct: 335 CGLGGKLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGC 394
Query: 635 LGHGNEECESAPKVVESLNKIKAVHVATGDYTTFVVSQDGGVYSFGCGESSSLGHATAID 456
LGHGNEECES PKVVE+L +KAVHVATGDYTTFVVS DG VYSFGCGESSSLGH D
Sbjct: 395 LGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPD 454
Query: 455 GQANRHANVLSPQLVTSLKQIKEKVVQISLTNSIYWNAHTFALTDSGNLYAFGAGDKGQL 276
GQ NRHAN+LSP+LVTSLKQIKE++VQISLTNSIYWNAHTFALT++G LYAFGAGDKGQL
Sbjct: 455 GQGNRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQL 514
Query: 275 GIELLAQQSERGDPER 228
G+EL+ Q+ERG+PER
Sbjct: 515 GVELVXNQTERGNPER 530
>ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group] gi|77554669|gb|ABA97465.1|
regulator of chromosome condensation, putative, expressed
[Oryza sativa Japonica Group] gi|77554670|gb|ABA97466.1|
regulator of chromosome condensation, putative, expressed
[Oryza sativa Japonica Group] gi|108862484|gb|ABA97467.2|
regulator of chromosome condensation, putative, expressed
[Oryza sativa Japonica Group]
gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa
Japonica Group] gi|215694343|dbj|BAG89336.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215694576|dbj|BAG89767.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215704369|dbj|BAG93803.1| unnamed protein product
[Oryza sativa Japonica Group] gi|222616915|gb|EEE53047.1|
hypothetical protein OsJ_35777 [Oryza sativa Japonica
Group]
Length = 534
Score = 810 bits (2093), Expect = 0.0
Identities = 405/560 (72%), Positives = 454/560 (81%), Gaps = 1/560 (0%)
Frame = -3
Query: 1886 MDATTS-GATPPIQYHNIIDQPLSLITPLQQTFQRLQRHCFGNLTPGEFPLAANPSIVLH 1710
MDATTS GA+ + H IID L+L++PLQQ+FQR QRHCFG PGEFPLAANPSIVLH
Sbjct: 1 MDATTSSGASSSLPLHLIIDDALALVSPLQQSFQRSQRHCFGGSAPGEFPLAANPSIVLH 60
Query: 1709 VLTACDLEPEDLAHLEATCSFFKQPANFAPDFELSIAELAALDMCQKRAIFKPLSLEERD 1530
VLT+C+LEP+DLAHLEATCSFF++PANF PDF+LS++ELAALDMCQKRAIFKP++ +ER+
Sbjct: 61 VLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQKRAIFKPMTQQERE 120
Query: 1529 VLKQRCGGSWKLVLRYLLAGEVCCRREKSQAIAGPGHSIAVTSKGAVYTFGSNNSGQLGH 1350
+ KQRCGGSWKLVLR+++AGE CCRREKSQAIAGPGHSIAVT+ GAVYTFGSN+SGQLGH
Sbjct: 121 MFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTTSGAVYTFGSNSSGQLGH 180
Query: 1349 GTLEEEWRPRLIXXXXXXXXXXXXXXXXXXXXXXXXXRSLXXXXXXXXXXXXXRTMLISD 1170
G+LEEEWRPR+I RSL RTML+SD
Sbjct: 181 GSLEEEWRPRII-------------------------RSLQGIRIIQAAAGAGRTMLVSD 215
Query: 1169 AGRVYAFGKDSFGEAEYGMQGSKLVTTPQPVESLKDIFVVQAAIGNFFTAVLSREGRVYT 990
AGRVYAFGKDSFGE EY QGS++VTTPQ VESLKDI++VQAAIGNFFTAVLSREG VYT
Sbjct: 216 AGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYT 275
Query: 989 FSWGSDATLGHQTDSNDLEPHQLMGPLEHIPVVQIAAGYCYLLALTCQPSGMSVYSVXXX 810
FSWG+D LGHQT+ ND++PH L GPLE+IPVVQIAAGYCYLLAL CQPSGMSVYSV
Sbjct: 276 FSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCG 335
Query: 809 XXXXXXXGSRTDERYPRLIERFQALNLQPXXXXXXXXXXXXVGRDGRVCTWGWGRYGCLG 630
GSRTDE+YPRLIE+FQALN+QP VG+DGRVCTWGWGRYGCLG
Sbjct: 336 LGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLG 395
Query: 629 HGNEECESAPKVVESLNKIKAVHVATGDYTTFVVSQDGGVYSFGCGESSSLGHATAIDGQ 450
HGNEECES PKVVESL ++AVHVATGDYTTFVVS G VYSFGCGESSSLGH T +G
Sbjct: 396 HGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGN 455
Query: 449 ANRHANVLSPQLVTSLKQIKEKVVQISLTNSIYWNAHTFALTDSGNLYAFGAGDKGQLGI 270
NRH NVLSP+LVTSLK+ E+V QISLTNSIYWNAHTFALTDSG LYAFGAGDKGQLG
Sbjct: 456 -NRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGT 514
Query: 269 ELLAQQSERGDPERVDIDLS 210
EL+AQ+SERG PERV+IDLS
Sbjct: 515 ELVAQESERGTPERVEIDLS 534
>gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
Length = 534
Score = 809 bits (2090), Expect = 0.0
Identities = 404/560 (72%), Positives = 454/560 (81%), Gaps = 1/560 (0%)
Frame = -3
Query: 1886 MDATTS-GATPPIQYHNIIDQPLSLITPLQQTFQRLQRHCFGNLTPGEFPLAANPSIVLH 1710
MDATTS GA+ + H IID L+ ++PLQQ+FQR QRHCFG+ PGEFPLAANPSIVLH
Sbjct: 1 MDATTSSGASSSLPLHLIIDDALAFVSPLQQSFQRSQRHCFGDSAPGEFPLAANPSIVLH 60
Query: 1709 VLTACDLEPEDLAHLEATCSFFKQPANFAPDFELSIAELAALDMCQKRAIFKPLSLEERD 1530
VLT+C+LEP+DLAHLEATCSFF++PANF PDF+LS++ELAALDMCQKRAIFKP++ +ER+
Sbjct: 61 VLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQKRAIFKPMTQQERE 120
Query: 1529 VLKQRCGGSWKLVLRYLLAGEVCCRREKSQAIAGPGHSIAVTSKGAVYTFGSNNSGQLGH 1350
+ KQRCGGSWKLVLR+++AGE CCRREKSQAIAGPGHSIAVT+ GAVYTFGSN+SGQLGH
Sbjct: 121 MFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTTGGAVYTFGSNSSGQLGH 180
Query: 1349 GTLEEEWRPRLIXXXXXXXXXXXXXXXXXXXXXXXXXRSLXXXXXXXXXXXXXRTMLISD 1170
G+LEEEWRPR+I RSL RTML+SD
Sbjct: 181 GSLEEEWRPRII-------------------------RSLQGIRIIQAAAGAGRTMLVSD 215
Query: 1169 AGRVYAFGKDSFGEAEYGMQGSKLVTTPQPVESLKDIFVVQAAIGNFFTAVLSREGRVYT 990
AGRVYAFGKDSFGE EY QGS++VTTPQ VESLKDI++VQAAIGNFFTAVLSREG VYT
Sbjct: 216 AGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYT 275
Query: 989 FSWGSDATLGHQTDSNDLEPHQLMGPLEHIPVVQIAAGYCYLLALTCQPSGMSVYSVXXX 810
FSWG+D LGHQT+ ND++PH L GPLE+IPVVQIAAGYCYLLAL CQPSGMSVYSV
Sbjct: 276 FSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCG 335
Query: 809 XXXXXXXGSRTDERYPRLIERFQALNLQPXXXXXXXXXXXXVGRDGRVCTWGWGRYGCLG 630
GSRTDE+YPRLIE+FQALN+QP VG+DGRVCTWGWGRYGCLG
Sbjct: 336 LGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLG 395
Query: 629 HGNEECESAPKVVESLNKIKAVHVATGDYTTFVVSQDGGVYSFGCGESSSLGHATAIDGQ 450
HGNEECES PKVVESL ++A+HVATGDYTTFVVS G VYSFGCGESSSLGH T +G
Sbjct: 396 HGNEECESVPKVVESLVNVRAIHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGN 455
Query: 449 ANRHANVLSPQLVTSLKQIKEKVVQISLTNSIYWNAHTFALTDSGNLYAFGAGDKGQLGI 270
NRH NVLSP+LVTSLK+ E+V QISLTNSIYWNAHTFALTDSG LYAFGAGDKGQLG
Sbjct: 456 -NRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGT 514
Query: 269 ELLAQQSERGDPERVDIDLS 210
EL+AQQSERG PERV+IDLS
Sbjct: 515 ELVAQQSERGTPERVEIDLS 534
>ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|222868979|gb|EEF06110.1|
predicted protein [Populus trichocarpa]
Length = 538
Score = 801 bits (2068), Expect = 0.0
Identities = 405/563 (71%), Positives = 453/563 (80%), Gaps = 5/563 (0%)
Frame = -3
Query: 1886 MDATTSGATPPIQYHNIIDQPLSLITPLQ-QTFQRLQRHCFGNLTPGEFPLAANPSIVLH 1710
MD+TTSG TP IQYHNI DQP++ I + T+QR QRHCFG+ PGEFPLAANPSIVLH
Sbjct: 1 MDSTTSG-TPTIQYHNITDQPVTAIVAVPVSTYQRNQRHCFGDSIPGEFPLAANPSIVLH 59
Query: 1709 VLTACDLEPEDLAHLEA----TCSFFKQPANFAPDFELSIAELAALDMCQKRAIFKPLSL 1542
VLT C+L+P+DLA LEA TCSFF+QPA+FAPD+ELS++ELAALDMCQKRAIFKP++
Sbjct: 60 VLTTCNLDPQDLAKLEAKSIATCSFFRQPASFAPDYELSMSELAALDMCQKRAIFKPMTP 119
Query: 1541 EERDVLKQRCGGSWKLVLRYLLAGEVCCRREKSQAIAGPGHSIAVTSKGAVYTFGSNNSG 1362
EER LKQRCGGSWKLVLR+LLAGE CCRRE+SQAIAGPGHSIAVTS G Y+FGSN+SG
Sbjct: 120 EERQDLKQRCGGSWKLVLRFLLAGEACCRRERSQAIAGPGHSIAVTSNGVAYSFGSNSSG 179
Query: 1361 QLGHGTLEEEWRPRLIXXXXXXXXXXXXXXXXXXXXXXXXXRSLXXXXXXXXXXXXXRTM 1182
QLGHGT EEEWRPR I RSL RTM
Sbjct: 180 QLGHGTTEEEWRPRQI-------------------------RSLQGIRIIQAAAGPGRTM 214
Query: 1181 LISDAGRVYAFGKDSFGEAEYGMQGSKLVTTPQPVESLKDIFVVQAAIGNFFTAVLSREG 1002
LISDAG VYAFGKDSFGEAEYG+QG+K VTTPQ VESLK+IFVVQAAIGNFFTAVLSREG
Sbjct: 215 LISDAGEVYAFGKDSFGEAEYGVQGTKTVTTPQLVESLKNIFVVQAAIGNFFTAVLSREG 274
Query: 1001 RVYTFSWGSDATLGHQTDSNDLEPHQLMGPLEHIPVVQIAAGYCYLLALTCQPSGMSVYS 822
RVYTFSWG+D LGHQT+ ND+ PH L+G LE+IPVVQIAAGYCYLLAL CQPSGMSVYS
Sbjct: 275 RVYTFSWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYS 334
Query: 821 VXXXXXXXXXXGSRTDERYPRLIERFQALNLQPXXXXXXXXXXXXVGRDGRVCTWGWGRY 642
V GSRTDE+YPRLIE+FQ LNLQP VGRDGRVCTWGWGRY
Sbjct: 335 VGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRY 394
Query: 641 GCLGHGNEECESAPKVVESLNKIKAVHVATGDYTTFVVSQDGGVYSFGCGESSSLGHATA 462
GCLGHGNEECES PKVV++L+K+KAVHVATGDYTTFVVS DG VYSFGCGES+SLGH
Sbjct: 395 GCLGHGNEECESVPKVVDALSKVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNGD 454
Query: 461 IDGQANRHANVLSPQLVTSLKQIKEKVVQISLTNSIYWNAHTFALTDSGNLYAFGAGDKG 282
DGQ NRH NVLSP+LVTSLK++KE+VVQISLTNS+YWNAHTFALT+SG L+AFGAGDKG
Sbjct: 455 GDGQGNRHTNVLSPELVTSLKEVKERVVQISLTNSVYWNAHTFALTESGKLFAFGAGDKG 514
Query: 281 QLGIELLAQQSERGDPERVDIDL 213
QLG+EL+ Q+ERG+PE+VD+DL
Sbjct: 515 QLGMELVNNQTERGNPEQVDVDL 537