BLASTX nr result

ID: Dioscorea21_contig00010001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010001
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23888.1| unknown [Picea sitchensis] gi|386277679|gb|AFJ044...   120   9e-26
gb|ABK22408.1| unknown [Picea sitchensis]                             120   9e-26
gb|ABK20993.1| unknown [Picea sitchensis] gi|116781861|gb|ABK222...   120   1e-25
sp|O22647.1|RS16_FRIAG RecName: Full=40S ribosomal protein S16 g...   120   2e-25
ref|XP_003518703.1| PREDICTED: 40S ribosomal protein S16-like [G...   119   2e-25

>gb|ABK23888.1| unknown [Picea sitchensis] gi|386277679|gb|AFJ04416.1| putative
           ribosomal S16 [Picea wilsonii]
          Length = 143

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/65 (87%), Positives = 62/65 (95%)
 Frame = +3

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIRVNGVPIELVKPEILRYKAFEPILLLGRSRFASVD 185
           +SVQCFGRKKTAVAVTYCKRGRGLI++NG PIEL++PEILRYKAFEPILLLGR RFA VD
Sbjct: 5   DSVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRYKAFEPILLLGRQRFAGVD 64

Query: 186 MRIRV 200
           MRIRV
Sbjct: 65  MRIRV 69


>gb|ABK22408.1| unknown [Picea sitchensis]
          Length = 151

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/65 (87%), Positives = 62/65 (95%)
 Frame = +3

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIRVNGVPIELVKPEILRYKAFEPILLLGRSRFASVD 185
           +SVQCFGRKKTAVAVTYCKRGRGLI++NG PIEL++PEILRYKAFEPILLLGR RFA VD
Sbjct: 5   DSVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRYKAFEPILLLGRQRFAGVD 64

Query: 186 MRIRV 200
           MRIRV
Sbjct: 65  MRIRV 69


>gb|ABK20993.1| unknown [Picea sitchensis] gi|116781861|gb|ABK22272.1| unknown
           [Picea sitchensis] gi|224285075|gb|ACN40265.1| unknown
           [Picea sitchensis]
          Length = 143

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/65 (87%), Positives = 62/65 (95%)
 Frame = +3

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIRVNGVPIELVKPEILRYKAFEPILLLGRSRFASVD 185
           +SVQCFGRKKTAVAVTYCKRGRGLI++NG PIEL++PEILRYKAFEPILLLGR RFA VD
Sbjct: 5   DSVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRYKAFEPILLLGRHRFAGVD 64

Query: 186 MRIRV 200
           MRIRV
Sbjct: 65  MRIRV 69


>sp|O22647.1|RS16_FRIAG RecName: Full=40S ribosomal protein S16 gi|2641209|gb|AAB86856.1|
           ribosomal protein S16 [Fritillaria agrestis]
          Length = 145

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/65 (90%), Positives = 61/65 (93%)
 Frame = +3

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIRVNGVPIELVKPEILRYKAFEPILLLGRSRFASVD 185
           ESVQCFGRKKTAVAVT+CKRGRGLI+VNG PIELVKPEILRYKAFEPILLLGR RF  VD
Sbjct: 7   ESVQCFGRKKTAVAVTHCKRGRGLIKVNGSPIELVKPEILRYKAFEPILLLGRHRFVGVD 66

Query: 186 MRIRV 200
           MRIRV
Sbjct: 67  MRIRV 71


>ref|XP_003518703.1| PREDICTED: 40S ribosomal protein S16-like [Glycine max]
          Length = 156

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/65 (87%), Positives = 62/65 (95%)
 Frame = +3

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIRVNGVPIELVKPEILRYKAFEPILLLGRSRFASVD 185
           E VQCFGRKKTAVAVTYCKRGRGLI++NG PIELV+PEILR+KAFEPILLLG+SRFA VD
Sbjct: 18  EQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKSRFAGVD 77

Query: 186 MRIRV 200
           MRIRV
Sbjct: 78  MRIRV 82


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