BLASTX nr result

ID: Dioscorea21_contig00009913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009913
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06606.1| 60S ribosomal protein L13E [Elaeis guineensis]         212   2e-53
gb|ACF06605.1| 60S ribosomal protein L13E [Elaeis guineensis]         212   2e-53
gb|AFW84113.1| hypothetical protein ZEAMMB73_641905 [Zea mays]        209   2e-52
ref|XP_002440279.1| hypothetical protein SORBIDRAFT_09g028960 [S...   209   2e-52
ref|XP_002439380.1| hypothetical protein SORBIDRAFT_09g005460 [S...   209   2e-52

>gb|ACF06606.1| 60S ribosomal protein L13E [Elaeis guineensis]
          Length = 207

 Score =  212 bits (540), Expect = 2e-53
 Identities = 104/108 (96%), Positives = 107/108 (99%)
 Frame = -2

Query: 324 VKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPVVQCQTLKYNMKPRAGRGFSLEEL 145
           V+TWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRP+VQCQTLKYNMK RAGRGF+LEEL
Sbjct: 21  VRTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVQCQTLKYNMKSRAGRGFTLEEL 80

Query: 144 KAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVIFPR 1
           KAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVIFPR
Sbjct: 81  KAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVIFPR 128


>gb|ACF06605.1| 60S ribosomal protein L13E [Elaeis guineensis]
          Length = 207

 Score =  212 bits (540), Expect = 2e-53
 Identities = 104/108 (96%), Positives = 107/108 (99%)
 Frame = -2

Query: 324 VKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPVVQCQTLKYNMKPRAGRGFSLEEL 145
           V+TWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRP+VQCQTLKYNMK RAGRGF+LEEL
Sbjct: 21  VRTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVQCQTLKYNMKSRAGRGFTLEEL 80

Query: 144 KAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVIFPR 1
           KAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVIFPR
Sbjct: 81  KAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVIFPR 128


>gb|AFW84113.1| hypothetical protein ZEAMMB73_641905 [Zea mays]
          Length = 206

 Score =  209 bits (531), Expect = 2e-52
 Identities = 102/108 (94%), Positives = 106/108 (98%)
 Frame = -2

Query: 324 VKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPVVQCQTLKYNMKPRAGRGFSLEEL 145
           VKTWFNQPARK RRRIARQKKAVKIFPRPTAGPLRP+VQCQTLKYNMK RAGRGF+LEEL
Sbjct: 21  VKTWFNQPARKQRRRIARQKKAVKIFPRPTAGPLRPIVQCQTLKYNMKSRAGRGFTLEEL 80

Query: 144 KAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVIFPR 1
           KAAGIPKKLAPTIGI+VDHRRKN+SLEGLQANVQRLKTYKAKLVIFPR
Sbjct: 81  KAAGIPKKLAPTIGISVDHRRKNKSLEGLQANVQRLKTYKAKLVIFPR 128


>ref|XP_002440279.1| hypothetical protein SORBIDRAFT_09g028960 [Sorghum bicolor]
           gi|241945564|gb|EES18709.1| hypothetical protein
           SORBIDRAFT_09g028960 [Sorghum bicolor]
          Length = 208

 Score =  209 bits (531), Expect = 2e-52
 Identities = 102/108 (94%), Positives = 106/108 (98%)
 Frame = -2

Query: 324 VKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPVVQCQTLKYNMKPRAGRGFSLEEL 145
           VKTWFNQPARK RRRIARQKKAVKIFPRPTAGPLRP+VQCQTLKYNMK RAGRGF+LEEL
Sbjct: 21  VKTWFNQPARKQRRRIARQKKAVKIFPRPTAGPLRPIVQCQTLKYNMKSRAGRGFTLEEL 80

Query: 144 KAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVIFPR 1
           KAAGIPKKLAPTIGI+VDHRRKN+SLEGLQANVQRLKTYKAKLVIFPR
Sbjct: 81  KAAGIPKKLAPTIGISVDHRRKNKSLEGLQANVQRLKTYKAKLVIFPR 128


>ref|XP_002439380.1| hypothetical protein SORBIDRAFT_09g005460 [Sorghum bicolor]
           gi|241944665|gb|EES17810.1| hypothetical protein
           SORBIDRAFT_09g005460 [Sorghum bicolor]
          Length = 208

 Score =  209 bits (531), Expect = 2e-52
 Identities = 102/108 (94%), Positives = 106/108 (98%)
 Frame = -2

Query: 324 VKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPVVQCQTLKYNMKPRAGRGFSLEEL 145
           VKTWFNQPARK RRRIARQKKAVKIFPRPTAGPLRP+VQCQTLKYNMK RAGRGF+LEEL
Sbjct: 21  VKTWFNQPARKQRRRIARQKKAVKIFPRPTAGPLRPIVQCQTLKYNMKSRAGRGFTLEEL 80

Query: 144 KAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVIFPR 1
           KAAGIPKKLAPTIGI+VDHRRKN+SLEGLQANVQRLKTYKAKLVIFPR
Sbjct: 81  KAAGIPKKLAPTIGISVDHRRKNKSLEGLQANVQRLKTYKAKLVIFPR 128


Top