BLASTX nr result

ID: Dioscorea21_contig00009687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009687
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar]                213   1e-53
emb|CBI37184.3| unnamed protein product [Vitis vinifera]              181   4e-44
ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-lik...   181   4e-44
emb|CAN60862.1| hypothetical protein VITISV_027789 [Vitis vinifera]   181   4e-44
ref|XP_003625373.1| Pre-mRNA-processing factor [Medicago truncat...   178   5e-43

>gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar]
          Length = 823

 Score =  213 bits (542), Expect = 1e-53
 Identities = 103/130 (79%), Positives = 115/130 (88%)
 Frame = -1

Query: 392 WDEYIRYEESHQAWSNLALIYTRILEHPIQQLDRYYNCFKDFAASHPLSEILTPEEATML 213
           WDEYIRYEES QAWSN+A+IYTRILE+P+QQLDRY+NCFK  AAS PLSEI T EEA +L
Sbjct: 279 WDEYIRYEESQQAWSNVAMIYTRILENPLQQLDRYFNCFKHLAASRPLSEIRTAEEAALL 338

Query: 212 SASVEADTKGVEGEVRPDGLDQSSKLVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIVD 33
           S+SVE D  GVEGEV PDG++QSSK +SAGLTE EELEKY+AIREEMY KAKEFDSKI+ 
Sbjct: 339 SSSVEFDGHGVEGEVCPDGVEQSSKAISAGLTEVEELEKYLAIREEMYSKAKEFDSKIIG 398

Query: 32  FETAIRRPYF 3
           FETAIRRPYF
Sbjct: 399 FETAIRRPYF 408


>emb|CBI37184.3| unnamed protein product [Vitis vinifera]
          Length = 211

 Score =  181 bits (460), Expect = 4e-44
 Identities = 90/131 (68%), Positives = 107/131 (81%), Gaps = 1/131 (0%)
 Frame = -1

Query: 392 WDEYIRYEESHQAWSNLALIYTRILEHPIQQLDRYYNCFKDFAASHPLSEILTPEEATML 213
           WD++I YE S Q WS LA+IYTRILE+P QQLDRY N FK+ A S PLSE+ T EEA   
Sbjct: 41  WDKFIEYEYSQQEWSRLAMIYTRILENPNQQLDRYLNSFKELAGSRPLSELTTAEEAAAT 100

Query: 212 SASV-EADTKGVEGEVRPDGLDQSSKLVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIV 36
           + +  +A+ +G+EGE RPD ++QSSK VSAGLT+AEELEKYIAIREEMYKKAK+FDSKI+
Sbjct: 101 AGAFSDANGQGIEGEARPDEVEQSSKPVSAGLTDAEELEKYIAIREEMYKKAKDFDSKII 160

Query: 35  DFETAIRRPYF 3
            FETAIRRPYF
Sbjct: 161 GFETAIRRPYF 171


>ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-like [Vitis vinifera]
          Length = 832

 Score =  181 bits (460), Expect = 4e-44
 Identities = 90/131 (68%), Positives = 107/131 (81%), Gaps = 1/131 (0%)
 Frame = -1

Query: 392 WDEYIRYEESHQAWSNLALIYTRILEHPIQQLDRYYNCFKDFAASHPLSEILTPEEATML 213
           WD++I YE S Q WS LA+IYTRILE+P QQLDRY N FK+ A S PLSE+ T EEA   
Sbjct: 284 WDKFIEYEYSQQEWSRLAMIYTRILENPNQQLDRYLNSFKELAGSRPLSELTTAEEAAAT 343

Query: 212 SASV-EADTKGVEGEVRPDGLDQSSKLVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIV 36
           + +  +A+ +G+EGE RPD ++QSSK VSAGLT+AEELEKYIAIREEMYKKAK+FDSKI+
Sbjct: 344 AGAFSDANGQGIEGEARPDEVEQSSKPVSAGLTDAEELEKYIAIREEMYKKAKDFDSKII 403

Query: 35  DFETAIRRPYF 3
            FETAIRRPYF
Sbjct: 404 GFETAIRRPYF 414


>emb|CAN60862.1| hypothetical protein VITISV_027789 [Vitis vinifera]
          Length = 826

 Score =  181 bits (460), Expect = 4e-44
 Identities = 90/131 (68%), Positives = 107/131 (81%), Gaps = 1/131 (0%)
 Frame = -1

Query: 392 WDEYIRYEESHQAWSNLALIYTRILEHPIQQLDRYYNCFKDFAASHPLSEILTPEEATML 213
           WD++I YE S Q WS LA+IYTRILE+P QQLDRY N FK+ A S PLSE+ T EEA   
Sbjct: 305 WDKFIEYEYSQQEWSRLAMIYTRILENPNQQLDRYLNSFKELAGSRPLSELTTAEEAAAT 364

Query: 212 SASV-EADTKGVEGEVRPDGLDQSSKLVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIV 36
           + +  +A+ +G+EGE RPD ++QSSK VSAGLT+AEELEKYIAIREEMYKKAK+FDSKI+
Sbjct: 365 AGAFSDANGQGIEGEARPDEVEQSSKPVSAGLTDAEELEKYIAIREEMYKKAKDFDSKII 424

Query: 35  DFETAIRRPYF 3
            FETAIRRPYF
Sbjct: 425 GFETAIRRPYF 435


>ref|XP_003625373.1| Pre-mRNA-processing factor [Medicago truncatula]
           gi|355500388|gb|AES81591.1| Pre-mRNA-processing factor
           [Medicago truncatula]
          Length = 838

 Score =  178 bits (451), Expect = 5e-43
 Identities = 89/131 (67%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
 Frame = -1

Query: 392 WDEYIRYEESHQAWSNLALIYTRILEHPIQQLDRYYNCFKDFAASHPLSEILTPEEATML 213
           WD+YI YE   Q W+ LA+IYTRILE+P QQLDRY+N FK+ A++ PLSE+ T +EA  +
Sbjct: 292 WDKYIEYEYMQQDWARLAMIYTRILENPNQQLDRYFNSFKELASNRPLSELRTADEAAAV 351

Query: 212 SASV-EADTKGVEGEVRPDGLDQSSKLVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIV 36
           +  V E   +GVEGEV PDG D S K  SAGLTEAEELEKYIAIREEMYKKAKEFDSKI+
Sbjct: 352 AGVVSEGIDQGVEGEVHPDGADNSPKPASAGLTEAEELEKYIAIREEMYKKAKEFDSKII 411

Query: 35  DFETAIRRPYF 3
            FET IRRPYF
Sbjct: 412 GFETTIRRPYF 422


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