BLASTX nr result
ID: Dioscorea21_contig00009531
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00009531
(1480 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containi... 364 4e-98
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi... 359 9e-97
ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containi... 350 5e-94
ref|NP_001168754.1| hypothetical protein [Zea mays] gi|223972833... 350 7e-94
ref|XP_002437974.1| hypothetical protein SORBIDRAFT_10g005740 [S... 349 1e-93
>ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Cucumis sativus]
gi|449516331|ref|XP_004165200.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Cucumis sativus]
Length = 393
Score = 364 bits (934), Expect = 4e-98
Identities = 171/320 (53%), Positives = 234/320 (73%), Gaps = 2/320 (0%)
Frame = +1
Query: 196 RTPSESHFNALVSSLHPGFTPADLADVLSSTADPDLALDLFRWACIRPGFRPDASLYHSL 375
+TP E F + V L PGF+P+D+ + L + +DPDLALDLFRW + G++ + Y ++
Sbjct: 69 QTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHNHLTYLTI 128
Query: 376 IRTLISSRRFXXXXXXXXXXXXXXCTPDPPLYNTIIHFCCSRRHLFSQAFDAFKKMRKSS 555
I+ LI RR C PLYN++I FCC+R+ F++AFD +KKM KS
Sbjct: 129 IKILIYRRRCHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDVYKKMWKSD 188
Query: 556 --KPSIETYSMLLGAIVKRFGKPPVSHIHLHSVKSLVRQMKASGIIPDTYALNLIIKAYS 729
KP++ETY+ML ++++RF K VS+++LHSV+SL +QMK+SG+IPDT+ LN+IIKAYS
Sbjct: 189 DCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYS 248
Query: 730 KCLEMDDAIRVFKEMALYNCEPNEYSYGYIAKGYCEKGRIREGLGFFKEMREKGFVPTSS 909
KCLE+D+AIRVF+EM LY C+PN Y+YGYIAKG CEKGR+ +GL F+KEMR +G +P+SS
Sbjct: 249 KCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRVRGLIPSSS 308
Query: 910 VYVAMICSLAMERWFEEGVEVLFDMLRNGMRPDVLSYRTLLEEMCRDGKSEHAFDLLEEL 1089
Y+ +ICSLAMER FEE +E+ FDML N M PD+L+YRTLLE +CR+G+ AFDLL+EL
Sbjct: 309 TYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDEL 368
Query: 1090 GRRNGAMEKKVYDDLLGGLH 1149
+R+ M +K + LL GLH
Sbjct: 369 RKRDKLMNEKTFKTLLNGLH 388
>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Vitis vinifera]
Length = 393
Score = 359 bits (922), Expect = 9e-97
Identities = 169/323 (52%), Positives = 235/323 (72%), Gaps = 2/323 (0%)
Frame = +1
Query: 199 TPSESHFNALVSSLHPGFTPADLADVLSSTADPDLALDLFRWACIRPGFRPDASLYHSLI 378
TP + F + + L PGF+P+D+ + L + +DPDLALD+FRW + G+R + Y ++I
Sbjct: 70 TPLQMQFESWIHMLKPGFSPSDVDEALRAQSDPDLALDIFRWTGQQRGYRHNHVTYLTMI 129
Query: 379 RTLISSRRFXXXXXXXXXXXXXXCTPDPPLYNTIIHFCCSRRHLFSQAFDAFKKMRKSS- 555
+ +S +RF C+ PLYN+II FCC R+ LF++AFD +KKM S
Sbjct: 130 KIAVSGKRFRHAETLIEEVIAGACSVSVPLYNSIIRFCCGRKFLFNRAFDVYKKMLNSED 189
Query: 556 -KPSIETYSMLLGAIVKRFGKPPVSHIHLHSVKSLVRQMKASGIIPDTYALNLIIKAYSK 732
KPS+ETY++LL A++++F K V +++LH+V+SL +QMK SG+IPDT+ALN+IIKAYSK
Sbjct: 190 CKPSLETYTLLLNALLRKFNKLTVCYVYLHAVRSLTKQMKVSGVIPDTFALNMIIKAYSK 249
Query: 733 CLEMDDAIRVFKEMALYNCEPNEYSYGYIAKGYCEKGRIREGLGFFKEMREKGFVPTSSV 912
CLE+D+AIRVF+EM LY CEPN Y+YGYIA G CEKGR+ +GLGF++EMR K VP+SS
Sbjct: 250 CLEVDEAIRVFREMGLYGCEPNAYTYGYIANGLCEKGRVSQGLGFYREMRSKDLVPSSST 309
Query: 913 YVAMICSLAMERWFEEGVEVLFDMLRNGMRPDVLSYRTLLEEMCRDGKSEHAFDLLEELG 1092
YV +ICSL+MER FEE ++LFDML N M PD+L+Y+TLLE + R+GK AF+LLE+L
Sbjct: 310 YVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGLSREGKCNDAFELLEDLR 369
Query: 1093 RRNGAMEKKVYDDLLGGLHWLCQ 1161
+++ M +K Y L+ GLH+L Q
Sbjct: 370 KKDAWMGEKTYKTLVKGLHFLSQ 392
>ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Glycine max]
Length = 372
Score = 350 bits (898), Expect = 5e-94
Identities = 167/325 (51%), Positives = 233/325 (71%), Gaps = 3/325 (0%)
Frame = +1
Query: 196 RTPSESHFNALVSSLHPGFTPADLADVLSSTADPDLALDLFRWACIRPGFRPDASLYHSL 375
RTPSE F V +L PGFTP+D+A L + +DPDLALD+FRW + ++ Y +
Sbjct: 47 RTPSEKQFETWVQALKPGFTPSDVAQALQAQSDPDLALDIFRWTAQQRNYKHTHHTYLII 106
Query: 376 IRTLISSRRFXXXXXXXXXXXXXXCTPDP-PLYNTIIHFCCSRRHLFSQAFDAFKKMRKS 552
I+ LI+ RR+ C PLYN+II FCC R+ LF++AFD +KKM S
Sbjct: 107 IKHLIAGRRYHHAETLIEEVIAGACDDASIPLYNSIIRFCCGRKFLFNRAFDVYKKMLNS 166
Query: 553 S--KPSIETYSMLLGAIVKRFGKPPVSHIHLHSVKSLVRQMKASGIIPDTYALNLIIKAY 726
KP++ETYS+L ++++RF K V +++LH+V+SL +QMKASG+IPD++ LN+IIKAY
Sbjct: 167 RDCKPNLETYSLLFNSLLRRFNKLNVCYVYLHAVRSLTKQMKASGVIPDSFVLNMIIKAY 226
Query: 727 SKCLEMDDAIRVFKEMALYNCEPNEYSYGYIAKGYCEKGRIREGLGFFKEMREKGFVPTS 906
+KCLE+D+AIRVF+EM LY CEPN YSYGYIAKG CEKGR+ +GL F++EMR KG VP++
Sbjct: 227 AKCLEVDEAIRVFREMGLYGCEPNAYSYGYIAKGLCEKGRVDQGLRFYREMRGKGLVPST 286
Query: 907 SVYVAMICSLAMERWFEEGVEVLFDMLRNGMRPDVLSYRTLLEEMCRDGKSEHAFDLLEE 1086
S +V ++CSLAMER FE+ +EVLFDML PD L+Y+T+LE +CR+G+ + AF+LL+E
Sbjct: 287 STFVIIVCSLAMERRFEDAIEVLFDMLGQSRSPDHLTYKTVLEGLCREGRVDEAFELLDE 346
Query: 1087 LGRRNGAMEKKVYDDLLGGLHWLCQ 1161
+R+ +M +K Y LL L+ +C+
Sbjct: 347 CKKRDVSMGEKTYKSLLNDLYVVCR 371
>ref|NP_001168754.1| hypothetical protein [Zea mays] gi|223972833|gb|ACN30604.1| unknown
[Zea mays] gi|413952901|gb|AFW85550.1| hypothetical
protein ZEAMMB73_871922 [Zea mays]
Length = 394
Score = 350 bits (897), Expect = 7e-94
Identities = 168/329 (51%), Positives = 229/329 (69%), Gaps = 6/329 (1%)
Frame = +1
Query: 196 RTPSESHFNALVSSLHPGFTPADLADVLSSTADPDLALDLFRWACIRPGFRPDASLYHSL 375
RTP + F A V+ L PGFT +DLA +++ DPDLAL LFRWA +RPGFR Y +
Sbjct: 51 RTPPDEQFAAWVTRLRPGFTASDLAAAITAEEDPDLALALFRWAALRPGFRHAPESYLAA 110
Query: 376 IRTLISSRRFXXXXXXXXXXXXXXCTPDPPLYNTIIHFCCSRRHLFSQAFDAFKKMRK-- 549
+ S RR C PD L+N + FCC+RR LF AFD F KMR
Sbjct: 111 LTAASSGRRPAAAEALVHDVFAGACAPDLRLFNACLRFCCARRSLFQLAFDMFNKMRAMP 170
Query: 550 ---SSKPSIETYSMLLGAIVKRFGKPPVSHIHLHSVKSLVRQMKASGIIPDTYALNLIIK 720
+P +ETY++LL A+V+R +PP S ++LH+V+SL RQMKASG++PDT+ LNLIIK
Sbjct: 171 AAAGCRPDVETYTLLLTAVVRRVRRPPASMVYLHAVRSLYRQMKASGVVPDTFLLNLIIK 230
Query: 721 AYSKCLEMDDAIRVFKEMALYNCEPNEYSYGYIAKGYCEKGRIREGLGFFKEMREKGFVP 900
AY++C+E+D+A++VF+EM LY CEPNE++YGYI K +KGR +G+ +F EMREKGFVP
Sbjct: 231 AYARCVEVDEALKVFREMPLYGCEPNEFTYGYIVKAMFQKGRSDKGMEYFAEMREKGFVP 290
Query: 901 TSSVYVAMICSLAMERWFEEGVEVLFDMLRNGMRPDVLSYRTLLEEMCRDGKSEHAFDLL 1080
+ VY+ + +LA+E F+E VL DML G +PD+++YRTLLEEMCR G++E AFD+L
Sbjct: 291 SGGVYMIAVSALALEWRFDESRRVLLDMLDCGRKPDMITYRTLLEEMCRAGRTEEAFDVL 350
Query: 1081 EEL-GRRNGAMEKKVYDDLLGGLHWLCQP 1164
EEL GR+ G +++++Y +LL GLHW+ QP
Sbjct: 351 EELKGRKRGTLDQRMYSELLDGLHWISQP 379
>ref|XP_002437974.1| hypothetical protein SORBIDRAFT_10g005740 [Sorghum bicolor]
gi|241916197|gb|EER89341.1| hypothetical protein
SORBIDRAFT_10g005740 [Sorghum bicolor]
Length = 397
Score = 349 bits (895), Expect = 1e-93
Identities = 167/330 (50%), Positives = 230/330 (69%), Gaps = 6/330 (1%)
Frame = +1
Query: 196 RTPSESHFNALVSSLHPGFTPADLADVLSSTADPDLALDLFRWACIRPGFRPDASLYHSL 375
RTP + F A V+ L PGFT +DLA +++ DPDLAL LFRWA +RPGFR Y +
Sbjct: 55 RTPPDEQFAAWVTRLRPGFTASDLAAAITAEEDPDLALALFRWAALRPGFRHAPESYLAA 114
Query: 376 IRTLISSRRFXXXXXXXXXXXXXXCTPDPPLYNTIIHFCCSRRHLFSQAFDAFKKMRK-- 549
+ S RR C PD L+N + FCC+RR LF AFD F KMR
Sbjct: 115 LTAASSGRRPAAAEALVHDVFAGACAPDLRLFNACLRFCCARRSLFPLAFDLFNKMRAMP 174
Query: 550 ---SSKPSIETYSMLLGAIVKRFGKPPVSHIHLHSVKSLVRQMKASGIIPDTYALNLIIK 720
+P +ETY++LL A+V+R +PP S ++LH+V+SL RQMKASG++PDT+ LNLIIK
Sbjct: 175 AAAGCRPDVETYTLLLTAVVRRVRRPPASMVYLHAVRSLSRQMKASGVVPDTFLLNLIIK 234
Query: 721 AYSKCLEMDDAIRVFKEMALYNCEPNEYSYGYIAKGYCEKGRIREGLGFFKEMREKGFVP 900
AY++C+E+D+A++VF+EM LY CEPNE++YGYI K +KGR +G+ +F EMR+KGFVP
Sbjct: 235 AYARCVEIDEALKVFREMPLYGCEPNEFTYGYIVKAMFQKGRSDKGMEYFAEMRDKGFVP 294
Query: 901 TSSVYVAMICSLAMERWFEEGVEVLFDMLRNGMRPDVLSYRTLLEEMCRDGKSEHAFDLL 1080
+ VY+ + +LA+E FEE VL DML G +PD+++YRTLLEE+CR G++E AF++L
Sbjct: 295 SGGVYMIAVSALALEWRFEESRRVLLDMLDCGRKPDMITYRTLLEELCRAGRTEEAFEVL 354
Query: 1081 EEL-GRRNGAMEKKVYDDLLGGLHWLCQPH 1167
EEL GR+ G +++++Y +LL GLHW+ QPH
Sbjct: 355 EELKGRKRGPLDQRMYSELLDGLHWISQPH 384