BLASTX nr result

ID: Dioscorea21_contig00008901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008901
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81976.1| hypothetical protein VITISV_039521 [Vitis vinifera]    49   4e-07
ref|XP_002263930.1| PREDICTED: uncharacterized protein LOC100241...    49   4e-07
ref|XP_002534079.1| conserved hypothetical protein [Ricinus comm...    47   1e-06
ref|XP_002453073.1| hypothetical protein SORBIDRAFT_04g037810 [S...    43   5e-06

>emb|CAN81976.1| hypothetical protein VITISV_039521 [Vitis vinifera]
          Length = 914

 Score = 48.9 bits (115), Expect(2) = 4e-07
 Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = -3

Query: 174 QRSIP*R-VNRFIPLDDENFYXXXXXXXXXXXXXXXXXXSGFCQSLDQLIQSYVQRQGR 1
           +R++P R +NRF P DD+N Y                  SGF +SLDQLIQSYV+RQGR
Sbjct: 636 RRTVPVRRINRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGR 694



 Score = 29.6 bits (65), Expect(2) = 4e-07
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -2

Query: 241 EDESHGTSETWQDGPSDPMR*RPTVYPVK 155
           E+ S    E+W +GPSDP R R TV PV+
Sbjct: 615 ENVSREAVESWSEGPSDPPRTRRTV-PVR 642


>ref|XP_002263930.1| PREDICTED: uncharacterized protein LOC100241098 [Vitis vinifera]
          Length = 862

 Score = 48.9 bits (115), Expect(2) = 4e-07
 Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = -3

Query: 174 QRSIP*R-VNRFIPLDDENFYXXXXXXXXXXXXXXXXXXSGFCQSLDQLIQSYVQRQGR 1
           +R++P R +NRF P DD+N Y                  SGF +SLDQLIQSYV+RQGR
Sbjct: 602 RRTVPVRRINRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGR 660



 Score = 29.6 bits (65), Expect(2) = 4e-07
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -2

Query: 241 EDESHGTSETWQDGPSDPMR*RPTVYPVK 155
           E+ S    E+W +GPSDP R R TV PV+
Sbjct: 581 ENVSREAVESWSEGPSDPPRTRRTV-PVR 608


>ref|XP_002534079.1| conserved hypothetical protein [Ricinus communis]
           gi|223525880|gb|EEF28302.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 831

 Score = 47.0 bits (110), Expect(2) = 1e-06
 Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -3

Query: 174 QRSIP*R-VNRFIPLDDENFYXXXXXXXXXXXXXXXXXXSGFCQSLDQLIQSYVQRQGR 1
           +R++P R +NRF P DD+N Y                  SGF +SLD LIQSYV+RQGR
Sbjct: 568 RRAVPVRRINRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDHLIQSYVERQGR 626



 Score = 30.4 bits (67), Expect(2) = 1e-06
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -2

Query: 241 EDESHGTSETWQDGPSDPMR*RPTVYPVK 155
           E+ S G  E W +GPSDP R R  V PV+
Sbjct: 547 ENPSQGAVENWTEGPSDPPRTRRAV-PVR 574


>ref|XP_002453073.1| hypothetical protein SORBIDRAFT_04g037810 [Sorghum bicolor]
           gi|241932904|gb|EES06049.1| hypothetical protein
           SORBIDRAFT_04g037810 [Sorghum bicolor]
          Length = 763

 Score = 42.7 bits (99), Expect(2) = 5e-06
 Identities = 23/54 (42%), Positives = 30/54 (55%)
 Frame = -3

Query: 165 IP*RVNRFIPLDDENFYXXXXXXXXXXXXXXXXXXSGFCQSLDQLIQSYVQRQG 4
           IP   NRFIP DD+N Y                  +GF +SL++LI+SYVQR+G
Sbjct: 512 IPRTENRFIPPDDDNVYSMELRELLSRRSVSNLLSNGFGESLERLIRSYVQRRG 565



 Score = 32.3 bits (72), Expect(2) = 5e-06
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 244 HEDESHGTSETWQDGPSD 191
           H+DESHGT E WQD   D
Sbjct: 487 HDDESHGTMENWQDDYQD 504


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