BLASTX nr result
ID: Dioscorea21_contig00008901
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00008901 (248 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN81976.1| hypothetical protein VITISV_039521 [Vitis vinifera] 49 4e-07 ref|XP_002263930.1| PREDICTED: uncharacterized protein LOC100241... 49 4e-07 ref|XP_002534079.1| conserved hypothetical protein [Ricinus comm... 47 1e-06 ref|XP_002453073.1| hypothetical protein SORBIDRAFT_04g037810 [S... 43 5e-06 >emb|CAN81976.1| hypothetical protein VITISV_039521 [Vitis vinifera] Length = 914 Score = 48.9 bits (115), Expect(2) = 4e-07 Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Frame = -3 Query: 174 QRSIP*R-VNRFIPLDDENFYXXXXXXXXXXXXXXXXXXSGFCQSLDQLIQSYVQRQGR 1 +R++P R +NRF P DD+N Y SGF +SLDQLIQSYV+RQGR Sbjct: 636 RRTVPVRRINRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGR 694 Score = 29.6 bits (65), Expect(2) = 4e-07 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = -2 Query: 241 EDESHGTSETWQDGPSDPMR*RPTVYPVK 155 E+ S E+W +GPSDP R R TV PV+ Sbjct: 615 ENVSREAVESWSEGPSDPPRTRRTV-PVR 642 >ref|XP_002263930.1| PREDICTED: uncharacterized protein LOC100241098 [Vitis vinifera] Length = 862 Score = 48.9 bits (115), Expect(2) = 4e-07 Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Frame = -3 Query: 174 QRSIP*R-VNRFIPLDDENFYXXXXXXXXXXXXXXXXXXSGFCQSLDQLIQSYVQRQGR 1 +R++P R +NRF P DD+N Y SGF +SLDQLIQSYV+RQGR Sbjct: 602 RRTVPVRRINRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGR 660 Score = 29.6 bits (65), Expect(2) = 4e-07 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = -2 Query: 241 EDESHGTSETWQDGPSDPMR*RPTVYPVK 155 E+ S E+W +GPSDP R R TV PV+ Sbjct: 581 ENVSREAVESWSEGPSDPPRTRRTV-PVR 608 >ref|XP_002534079.1| conserved hypothetical protein [Ricinus communis] gi|223525880|gb|EEF28302.1| conserved hypothetical protein [Ricinus communis] Length = 831 Score = 47.0 bits (110), Expect(2) = 1e-06 Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Frame = -3 Query: 174 QRSIP*R-VNRFIPLDDENFYXXXXXXXXXXXXXXXXXXSGFCQSLDQLIQSYVQRQGR 1 +R++P R +NRF P DD+N Y SGF +SLD LIQSYV+RQGR Sbjct: 568 RRAVPVRRINRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDHLIQSYVERQGR 626 Score = 30.4 bits (67), Expect(2) = 1e-06 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -2 Query: 241 EDESHGTSETWQDGPSDPMR*RPTVYPVK 155 E+ S G E W +GPSDP R R V PV+ Sbjct: 547 ENPSQGAVENWTEGPSDPPRTRRAV-PVR 574 >ref|XP_002453073.1| hypothetical protein SORBIDRAFT_04g037810 [Sorghum bicolor] gi|241932904|gb|EES06049.1| hypothetical protein SORBIDRAFT_04g037810 [Sorghum bicolor] Length = 763 Score = 42.7 bits (99), Expect(2) = 5e-06 Identities = 23/54 (42%), Positives = 30/54 (55%) Frame = -3 Query: 165 IP*RVNRFIPLDDENFYXXXXXXXXXXXXXXXXXXSGFCQSLDQLIQSYVQRQG 4 IP NRFIP DD+N Y +GF +SL++LI+SYVQR+G Sbjct: 512 IPRTENRFIPPDDDNVYSMELRELLSRRSVSNLLSNGFGESLERLIRSYVQRRG 565 Score = 32.3 bits (72), Expect(2) = 5e-06 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = -2 Query: 244 HEDESHGTSETWQDGPSD 191 H+DESHGT E WQD D Sbjct: 487 HDDESHGTMENWQDDYQD 504