BLASTX nr result

ID: Dioscorea21_contig00008766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008766
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch...   278   2e-73
ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2,...   278   4e-73
ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2,...   278   4e-73
emb|CBI23954.3| unnamed protein product [Vitis vinifera]              277   6e-73
ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2,...   277   6e-73

>sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic;
           Flags: Precursor gi|2792520|gb|AAB97087.1| tryptophan
           synthase beta subunit [Camptotheca acuminata]
           gi|2801771|gb|AAB97526.1| tryptophan synthase beta
           [Camptotheca acuminata]
          Length = 466

 Score =  278 bits (712), Expect = 2e-73
 Identities = 142/153 (92%), Positives = 145/153 (94%)
 Frame = +1

Query: 1   SAFKSLSQDQDFQKELDGILRDYVGRESPLYFAERLTDYYKHSNGEGPLIYLKREDLNHT 180
           SAF+SLS DQ FQKELDGIL+DYVGRESPLYFAERLT +YK  NGEGP IYLKREDLNHT
Sbjct: 98  SAFRSLSGDQVFQKELDGILKDYVGRESPLYFAERLTLHYKRPNGEGPEIYLKREDLNHT 157

Query: 181 GAHKINNAVAQALLAKHLGKKRIIAETGAGQHGVATATVCARFGLDCVIYMGAQDMERQA 360
           GAHKINNAVAQALLAK LGKKRIIAETGAGQHGVATATVCARFGL CVIYMGAQDMERQA
Sbjct: 158 GAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLQCVIYMGAQDMERQA 217

Query: 361 LNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 459
           LNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD
Sbjct: 218 LNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 250


>ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Cucumis sativus]
          Length = 472

 Score =  278 bits (710), Expect = 4e-73
 Identities = 138/153 (90%), Positives = 147/153 (96%)
 Frame = +1

Query: 1   SAFKSLSQDQDFQKELDGILRDYVGRESPLYFAERLTDYYKHSNGEGPLIYLKREDLNHT 180
           +AF SL+ DQDFQKELDGILRDYVGRESPLYFAERLT++Y+ SNGEGP I+LKREDLNHT
Sbjct: 104 TAFYSLAGDQDFQKELDGILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHT 163

Query: 181 GAHKINNAVAQALLAKHLGKKRIIAETGAGQHGVATATVCARFGLDCVIYMGAQDMERQA 360
           GAHKINNAVAQALLAK LGKKRIIAETGAGQHGVATATVCARFGL+C+IYMGAQDMERQA
Sbjct: 164 GAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQA 223

Query: 361 LNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 459
           LNVFRM+LLGAEVR VHSGTATLKDATSEAIRD
Sbjct: 224 LNVFRMQLLGAEVRPVHSGTATLKDATSEAIRD 256


>ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Cucumis sativus]
          Length = 472

 Score =  278 bits (710), Expect = 4e-73
 Identities = 138/153 (90%), Positives = 147/153 (96%)
 Frame = +1

Query: 1   SAFKSLSQDQDFQKELDGILRDYVGRESPLYFAERLTDYYKHSNGEGPLIYLKREDLNHT 180
           +AF SL+ DQDFQKELDGILRDYVGRESPLYFAERLT++Y+ SNGEGP I+LKREDLNHT
Sbjct: 104 TAFYSLAGDQDFQKELDGILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHT 163

Query: 181 GAHKINNAVAQALLAKHLGKKRIIAETGAGQHGVATATVCARFGLDCVIYMGAQDMERQA 360
           GAHKINNAVAQALLAK LGKKRIIAETGAGQHGVATATVCARFGL+C+IYMGAQDMERQA
Sbjct: 164 GAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQA 223

Query: 361 LNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 459
           LNVFRM+LLGAEVR VHSGTATLKDATSEAIRD
Sbjct: 224 LNVFRMQLLGAEVRPVHSGTATLKDATSEAIRD 256


>emb|CBI23954.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  277 bits (709), Expect = 6e-73
 Identities = 137/153 (89%), Positives = 146/153 (95%)
 Frame = +1

Query: 1   SAFKSLSQDQDFQKELDGILRDYVGRESPLYFAERLTDYYKHSNGEGPLIYLKREDLNHT 180
           SAF++LS D +FQKELDGIL+DYVGRESPLYFAERLT++YK  NGEGPLIYLKREDLNHT
Sbjct: 39  SAFRALSGDVEFQKELDGILKDYVGRESPLYFAERLTEHYKRHNGEGPLIYLKREDLNHT 98

Query: 181 GAHKINNAVAQALLAKHLGKKRIIAETGAGQHGVATATVCARFGLDCVIYMGAQDMERQA 360
           GAHKINNAVAQALLAK LGK RIIAETGAGQHGVATATVCARFGL C++YMGAQDMERQA
Sbjct: 99  GAHKINNAVAQALLAKRLGKTRIIAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQA 158

Query: 361 LNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 459
           LNVFRMRLLGAEVRAVH+GTATLKDATSEAIRD
Sbjct: 159 LNVFRMRLLGAEVRAVHAGTATLKDATSEAIRD 191


>ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic [Vitis
           vinifera]
          Length = 458

 Score =  277 bits (709), Expect = 6e-73
 Identities = 137/153 (89%), Positives = 146/153 (95%)
 Frame = +1

Query: 1   SAFKSLSQDQDFQKELDGILRDYVGRESPLYFAERLTDYYKHSNGEGPLIYLKREDLNHT 180
           SAF++LS D +FQKELDGIL+DYVGRESPLYFAERLT++YK  NGEGPLIYLKREDLNHT
Sbjct: 90  SAFRALSGDVEFQKELDGILKDYVGRESPLYFAERLTEHYKRHNGEGPLIYLKREDLNHT 149

Query: 181 GAHKINNAVAQALLAKHLGKKRIIAETGAGQHGVATATVCARFGLDCVIYMGAQDMERQA 360
           GAHKINNAVAQALLAK LGK RIIAETGAGQHGVATATVCARFGL C++YMGAQDMERQA
Sbjct: 150 GAHKINNAVAQALLAKRLGKTRIIAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQA 209

Query: 361 LNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 459
           LNVFRMRLLGAEVRAVH+GTATLKDATSEAIRD
Sbjct: 210 LNVFRMRLLGAEVRAVHAGTATLKDATSEAIRD 242


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