BLASTX nr result

ID: Dioscorea21_contig00008530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008530
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containin...   135   8e-30
ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containin...   134   2e-29
gb|ACU23866.1| unknown [Glycine max]                                  134   2e-29
ref|XP_002514184.1| hypothetical protein RCOM_1048570 [Ricinus c...   132   1e-28
ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containin...   128   2e-27

>ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 355

 Score =  135 bits (341), Expect = 8e-30
 Identities = 81/180 (45%), Positives = 106/180 (58%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3   ESYDGSPLRHHALDAYFTKNMFXXXXXXXXXXXXXXXXXXXXXXXXVMRRAPVGASVNEV 182
           +SYDGSPLRH A+++   K +                             +P+  SVNE+
Sbjct: 187 DSYDGSPLRH-AIESSCAKTLAPAPFVSSPGSVSPPLESPPM--------SPMTVSVNEM 237

Query: 183 LASLRQLQLSKAKSAPSSWGLQIGCGLGSPRSPAVRGGGGFSSLPATPTRSSV-GSSGWF 359
           +ASLR LQL K KS PSSW +    G GSPR P +R   GF SLP TPT++   G   +F
Sbjct: 238 VASLRNLQLGKVKSLPSSWNVMGPSGFGSPRGPMIR--PGFFSLPTTPTQAPTRGGVNYF 295

Query: 360 DRWDGGHVDEPPMERVESGRALRAKMFERLSKESGMEKPETGSPAPAMGTPDVGWVSELV 539
           D+WD    +EP MERVESGR +RA+MF +LSKE+ ++  ++GS    +G PDVGWVSELV
Sbjct: 296 DKWDQSCEEEPVMERVESGRNIRARMFAKLSKENHLDGSDSGS--GQIGDPDVGWVSELV 353


>ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 353

 Score =  134 bits (338), Expect = 2e-29
 Identities = 81/181 (44%), Positives = 105/181 (58%), Gaps = 2/181 (1%)
 Frame = +3

Query: 3   ESYDGSPLRHHALDAYFTKNMFXXXXXXXXXXXXXXXXXXXXXXXXVMRRAPVGASVNEV 182
           +SYDGSPLRH    +    + F                            +P+  SVNE+
Sbjct: 187 DSYDGSPLRHAIESSCAKSHPFVASPGSASSPVESPPM------------SPMTVSVNEM 234

Query: 183 LASLRQLQLSKAKSAPSSWGLQIGCGLGSPRSPAVRGGGGFSSLPATPTRSSV-GSSGWF 359
           +ASLR LQL K KS PSSW +    G GSPR P +R   GF SLP TPT++   G   +F
Sbjct: 235 VASLRNLQLGKVKSLPSSWNVMGSSGFGSPRGPMIR--PGFFSLPTTPTQAPTRGGVNYF 292

Query: 360 DRWDGGHVDEPP-MERVESGRALRAKMFERLSKESGMEKPETGSPAPAMGTPDVGWVSEL 536
           D+WD    +E P MERVESGR++RA+MFE+LSKE+ ++   +GS +  +G PDVGWVSEL
Sbjct: 293 DQWDQSCCEEEPVMERVESGRSIRARMFEKLSKENHLD--GSGSGSSQIGVPDVGWVSEL 350

Query: 537 V 539
           V
Sbjct: 351 V 351


>gb|ACU23866.1| unknown [Glycine max]
          Length = 355

 Score =  134 bits (338), Expect = 2e-29
 Identities = 81/180 (45%), Positives = 105/180 (58%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3   ESYDGSPLRHHALDAYFTKNMFXXXXXXXXXXXXXXXXXXXXXXXXVMRRAPVGASVNEV 182
           +SYDGSPLRH A+++   K +                             +P+  SVNE+
Sbjct: 187 DSYDGSPLRH-AIESSCAKTLAPAPFVSSPGSVSPPLESPPM--------SPMTVSVNEM 237

Query: 183 LASLRQLQLSKAKSAPSSWGLQIGCGLGSPRSPAVRGGGGFSSLPATPTRSSV-GSSGWF 359
           +ASLR LQL K KS PSSW +    G GSPR P +R   GF SLP TPT++   G   +F
Sbjct: 238 VASLRNLQLGKVKSLPSSWNVMGPSGFGSPRGPMIR--PGFFSLPTTPTQAPTRGGVNYF 295

Query: 360 DRWDGGHVDEPPMERVESGRALRAKMFERLSKESGMEKPETGSPAPAMGTPDVGWVSELV 539
           D+WD    +EP MERVESGR +RA+MF +LSKE+ ++  + GS    +G PDVGWVSELV
Sbjct: 296 DKWDQSCEEEPVMERVESGRNIRARMFAKLSKENHLDGSDFGS--GQIGDPDVGWVSELV 353


>ref|XP_002514184.1| hypothetical protein RCOM_1048570 [Ricinus communis]
           gi|223546640|gb|EEF48138.1| hypothetical protein
           RCOM_1048570 [Ricinus communis]
          Length = 259

 Score =  132 bits (331), Expect = 1e-28
 Identities = 84/182 (46%), Positives = 105/182 (57%), Gaps = 2/182 (1%)
 Frame = +3

Query: 3   ESYDGSPLRHHALDAYFTKNMFXXXXXXXXXXXXXXXXXXXXXXXXVMRRAPVGASVNEV 182
           +SYDGSPLR     A   K +                         ++ R+    S+NE+
Sbjct: 81  DSYDGSPLRQAMEAAACVKVLPFLSSPSSISPPPTPPAADSPPMSPMLSRSVGSNSINEM 140

Query: 183 LASLRQLQLSKAKSAPSSWGLQIG-CGLGSPRSPAVRGGGGFSSLPATPTRSSVGSS-GW 356
           +ASLR LQL K +S PSSW +Q+G  G GSPRS +V   G F SLP TPT +   S  G+
Sbjct: 141 VASLRNLQLGKMRSLPSSWNVQVGGSGFGSPRSGSVLRPG-FCSLPTTPTSAPTRSGLGY 199

Query: 357 FDRWDGGHVDEPPMERVESGRALRAKMFERLSKESGMEKPETGSPAPAMGTPDVGWVSEL 536
            D WD   ++EP MERVESGR LRAKMFE+LSKE+ + + E   PA +   PDVGWVSEL
Sbjct: 200 RDMWDDV-IEEPAMERVESGRGLRAKMFEKLSKENSLGRVEP-DPAQSGSAPDVGWVSEL 257

Query: 537 VM 542
           VM
Sbjct: 258 VM 259


>ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           isoform 1 [Glycine max] gi|356520842|ref|XP_003529069.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           20-like isoform 2 [Glycine max]
          Length = 359

 Score =  128 bits (321), Expect = 2e-27
 Identities = 83/181 (45%), Positives = 97/181 (53%), Gaps = 2/181 (1%)
 Frame = +3

Query: 3   ESYDGSPLRHHALDAYFTKNMFXXXXXXXXXXXXXXXXXXXXXXXXVMRRAPVGASVNEV 182
           ESYDGSP+R     A F  +                               PV  S+NE+
Sbjct: 201 ESYDGSPMRQMMSPAAFMSSPAASLSPP--------------------ESPPVSPSINEM 240

Query: 183 LASLRQLQLSKAKSAPSSWGLQIGC-GLGSPRSPAVRGGGGFSSLPATPTRSSVGSS-GW 356
           +ASLR LQL K KS P S  + +G  G GSPR   +R G  F SLP TPT+  V S    
Sbjct: 241 VASLRNLQLGKMKSMPQSRNVSVGSPGYGSPRGSVLRPG--FCSLPTTPTQQPVRSGVNC 298

Query: 357 FDRWDGGHVDEPPMERVESGRALRAKMFERLSKESGMEKPETGSPAPAMGTPDVGWVSEL 536
           FD WD    +EP MERVESGR +RAKMFE+LSKE+ +E   TGS     G PDVGWVSEL
Sbjct: 299 FDFWDQSCEEEPVMERVESGRGIRAKMFEKLSKENSLEGSGTGS-GQGSGAPDVGWVSEL 357

Query: 537 V 539
           V
Sbjct: 358 V 358