BLASTX nr result

ID: Dioscorea21_contig00007998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007998
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV71172.1| beta-tubulin [Lotus corniculatus]                      457   e-127
sp|P25862.1|TBB1_AVESA RecName: Full=Tubulin beta-1 chain; AltNa...   457   e-127
sp|P29502.1|TBB3_PEA RecName: Full=Tubulin beta-3 chain; AltName...   457   e-127
gb|AFC88847.1| putative beta-5 tubulin, partial [Tetragonia tetr...   457   e-127
ref|XP_003564425.1| PREDICTED: tubulin beta chain-like [Brachypo...   457   e-127

>gb|AAV71172.1| beta-tubulin [Lotus corniculatus]
          Length = 419

 Score =  457 bits (1177), Expect = e-127
 Identities = 223/237 (94%), Positives = 223/237 (94%)
 Frame = +1

Query: 1   MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 180
           MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE
Sbjct: 57  MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 116

Query: 181 NCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 360
           NCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA
Sbjct: 117 NCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 176

Query: 361 TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 540
           TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ
Sbjct: 177 TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 236

Query: 541 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA 711
           LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA
Sbjct: 237 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA 293


>sp|P25862.1|TBB1_AVESA RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|16122|emb|CAA38630.1| beta-tubulin [Avena sativa]
          Length = 386

 Score =  457 bits (1177), Expect = e-127
 Identities = 223/237 (94%), Positives = 223/237 (94%)
 Frame = +1

Query: 1   MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 180
           MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE
Sbjct: 4   MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 63

Query: 181 NCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 360
           NCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA
Sbjct: 64  NCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 123

Query: 361 TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 540
           TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ
Sbjct: 124 TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 183

Query: 541 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA 711
           LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA
Sbjct: 184 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA 240


>sp|P29502.1|TBB3_PEA RecName: Full=Tubulin beta-3 chain; AltName: Full=Beta-3-tubulin
           gi|388255|emb|CAA38615.1| beta-tubulin 3 [Pisum sativum]
          Length = 440

 Score =  457 bits (1177), Expect = e-127
 Identities = 223/237 (94%), Positives = 223/237 (94%)
 Frame = +1

Query: 1   MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 180
           MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE
Sbjct: 57  MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 116

Query: 181 NCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 360
           NCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA
Sbjct: 117 NCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 176

Query: 361 TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 540
           TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ
Sbjct: 177 TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 236

Query: 541 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA 711
           LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA
Sbjct: 237 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA 293


>gb|AFC88847.1| putative beta-5 tubulin, partial [Tetragonia tetragonioides]
          Length = 355

 Score =  457 bits (1177), Expect = e-127
 Identities = 223/237 (94%), Positives = 223/237 (94%)
 Frame = +1

Query: 1   MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 180
           MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE
Sbjct: 41  MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 100

Query: 181 NCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 360
           NCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA
Sbjct: 101 NCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 160

Query: 361 TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 540
           TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ
Sbjct: 161 TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 220

Query: 541 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA 711
           LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA
Sbjct: 221 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA 277


>ref|XP_003564425.1| PREDICTED: tubulin beta chain-like [Brachypodium distachyon]
          Length = 447

 Score =  457 bits (1177), Expect = e-127
 Identities = 223/237 (94%), Positives = 223/237 (94%)
 Frame = +1

Query: 1   MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 180
           MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE
Sbjct: 66  MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125

Query: 181 NCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 360
           NCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA
Sbjct: 126 NCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185

Query: 361 TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 540
           TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ
Sbjct: 186 TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 245

Query: 541 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA 711
           LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA
Sbjct: 246 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCA 302