BLASTX nr result

ID: Dioscorea21_contig00007975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007975
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|2...    89   2e-31
ref|XP_004140896.1| PREDICTED: RING-H2 finger protein ATL7-like ...    84   5e-31
ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vit...    79   1e-30
emb|CBI40211.3| unnamed protein product [Vitis vinifera]               79   1e-30
ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like...    86   2e-29

>ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|222864493|gb|EEF01624.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 88.6 bits (218), Expect(2) = 2e-31
 Identities = 39/58 (67%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
 Frame = +3

Query: 267 LPYCGHAFHVACIDIWLKQHSTCPVCRISLRDSPDQKRAMQPI--AAIRSLYPPGNFD 434
           LPYCGH+FHV CID+WL+QHSTCP+CRISLR+ P++K AMQP+  +AIRS Y    FD
Sbjct: 103 LPYCGHSFHVTCIDMWLQQHSTCPMCRISLREFPEKKCAMQPLFSSAIRSQYGTETFD 160



 Score = 72.0 bits (175), Expect(2) = 2e-31
 Identities = 34/55 (61%), Positives = 43/55 (78%)
 Frame = +1

Query: 1   ARIHLSASRRSFPTASRSDLSILERGIHGLEPVVVAGFPIQKFGEHFAMSGQDTQ 165
           ARI L+ASRRSF  ASRSDLS+LERG+HGLEPVV+A FP +K+ +    + +D Q
Sbjct: 32  ARIQLNASRRSFRIASRSDLSMLERGLHGLEPVVIASFPTKKYNDKLFSASEDAQ 86


>ref|XP_004140896.1| PREDICTED: RING-H2 finger protein ATL7-like [Cucumis sativus]
           gi|449528792|ref|XP_004171387.1| PREDICTED: RING-H2
           finger protein ATL7-like [Cucumis sativus]
          Length = 218

 Score = 84.3 bits (207), Expect(2) = 5e-31
 Identities = 37/51 (72%), Positives = 44/51 (86%), Gaps = 2/51 (3%)
 Frame = +3

Query: 267 LPYCGHAFHVACIDIWLKQHSTCPVCRISLRDSPDQKRAMQPI--AAIRSL 413
           LPYCGH+FHV CIDIWL QHSTCPVCR+SLR+  D+KR MQP+  +AIR+L
Sbjct: 103 LPYCGHSFHVNCIDIWLHQHSTCPVCRLSLREVQDKKRTMQPLFSSAIRAL 153



 Score = 75.1 bits (183), Expect(2) = 5e-31
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = +1

Query: 1   ARIHLSASRRSFPTASRSDLSILERGIHGLEPVVVAGFPIQKFGEHFAMSGQDTQ 165
           ARIHL+ASRRSFP ASRSDLS LERG+HG+EP+VVA FP +K+ + +  S Q+ Q
Sbjct: 32  ARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMQNAQ 86


>ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vitis vinifera]
          Length = 228

 Score = 79.3 bits (194), Expect(2) = 1e-30
 Identities = 35/50 (70%), Positives = 42/50 (84%), Gaps = 2/50 (4%)
 Frame = +3

Query: 267 LPYCGHAFHVACIDIWLKQHSTCPVCRISLRDSPDQKRAMQPI--AAIRS 410
           LPYCGH FHV CIDIWL+QHSTCPVCRISL + P++K  MQP+  +A+RS
Sbjct: 103 LPYCGHFFHVTCIDIWLQQHSTCPVCRISLWEFPERKCLMQPMFSSAVRS 152



 Score = 79.0 bits (193), Expect(2) = 1e-30
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = +1

Query: 1   ARIHLSASRRSFPTASRSDLSILERGIHGLEPVVVAGFPIQKFGEHFAMSGQDTQ 165
           ARI L+ASRRSFP ASRSDLSILERG+HGLEP VVA FP +KF + F    +D Q
Sbjct: 32  ARIQLNASRRSFPVASRSDLSILERGLHGLEPAVVANFPTKKFADEFFSPAEDAQ 86


>emb|CBI40211.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score = 79.3 bits (194), Expect(2) = 1e-30
 Identities = 35/50 (70%), Positives = 42/50 (84%), Gaps = 2/50 (4%)
 Frame = +3

Query: 267 LPYCGHAFHVACIDIWLKQHSTCPVCRISLRDSPDQKRAMQPI--AAIRS 410
           LPYCGH FHV CIDIWL+QHSTCPVCRISL + P++K  MQP+  +A+RS
Sbjct: 84  LPYCGHFFHVTCIDIWLQQHSTCPVCRISLWEFPERKCLMQPMFSSAVRS 133



 Score = 79.0 bits (193), Expect(2) = 1e-30
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = +1

Query: 1   ARIHLSASRRSFPTASRSDLSILERGIHGLEPVVVAGFPIQKFGEHFAMSGQDTQ 165
           ARI L+ASRRSFP ASRSDLSILERG+HGLEP VVA FP +KF + F    +D Q
Sbjct: 13  ARIQLNASRRSFPVASRSDLSILERGLHGLEPAVVANFPTKKFADEFFSPAEDAQ 67


>ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like [Glycine max]
          Length = 229

 Score = 85.5 bits (210), Expect(2) = 2e-29
 Identities = 37/58 (63%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
 Frame = +3

Query: 267 LPYCGHAFHVACIDIWLKQHSTCPVCRISLRDSPDQKRAMQPI--AAIRSLYPPGNFD 434
           LPYCGH+FHV CID+WL+Q+STCPVCRISLR+ PD+KR MQP+  +A++  Y   +FD
Sbjct: 103 LPYCGHSFHVTCIDLWLQQNSTCPVCRISLREFPDRKRLMQPLFSSALQPHYDIESFD 160



 Score = 68.9 bits (167), Expect(2) = 2e-29
 Identities = 32/55 (58%), Positives = 44/55 (80%)
 Frame = +1

Query: 1   ARIHLSASRRSFPTASRSDLSILERGIHGLEPVVVAGFPIQKFGEHFAMSGQDTQ 165
           ARIHL+A+RRSFP ASRS+LS++ERG HGLE V VA FP +K+ + F  + +++Q
Sbjct: 32  ARIHLNAARRSFPIASRSNLSMMERGCHGLERVTVAKFPTKKYSDKFFAAAENSQ 86


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