BLASTX nr result

ID: Dioscorea21_contig00007967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007967
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440945.1| hypothetical protein SORBIDRAFT_09g017540 [S...   113   5e-23
dbj|BAJ87611.1| predicted protein [Hordeum vulgare subsp. vulgare]    112   7e-23
gb|EEC79055.1| hypothetical protein OsI_19619 [Oryza sativa Indi...   111   2e-22
gb|ACG28358.1| fiber protein Fb2 [Zea mays] gi|413945047|gb|AFW7...   111   2e-22
ref|NP_001148883.1| fiber protein Fb2 [Zea mays] gi|194695958|gb...   111   2e-22

>ref|XP_002440945.1| hypothetical protein SORBIDRAFT_09g017540 [Sorghum bicolor]
           gi|241946230|gb|EES19375.1| hypothetical protein
           SORBIDRAFT_09g017540 [Sorghum bicolor]
          Length = 235

 Score =  113 bits (282), Expect = 5e-23
 Identities = 58/116 (50%), Positives = 79/116 (68%)
 Frame = -1

Query: 766 LVGHITMQHASYFKMQRRRRLRKGSTGTHSIPSLMKSEYRQGSLHSFLGXXXXXXXXXXX 587
           L+GH+TMQH SYFKMQRRRR+RK STG+HS+ SL++ + R GSL SFLG           
Sbjct: 98  LIGHLTMQHGSYFKMQRRRRVRKVSTGSHSLLSLLRKDLRNGSLQSFLGGSSYVSNPPAA 157

Query: 586 XPDPLLSSFILTMPVADSSKDVLAESLDESSATYKSSDDNLVESVELSMSDQNQQE 419
            PDP LSS I ++PVA+ SKD+ ++S D +    K  D+  VE  E S+S+++Q+E
Sbjct: 158 APDPFLSSLICSLPVAEPSKDLHSDSSDNNFLLNKFPDEKTVERAEPSLSEKDQKE 213


>dbj|BAJ87611.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 152

 Score =  112 bits (281), Expect = 7e-23
 Identities = 57/116 (49%), Positives = 79/116 (68%)
 Frame = -1

Query: 766 LVGHITMQHASYFKMQRRRRLRKGSTGTHSIPSLMKSEYRQGSLHSFLGXXXXXXXXXXX 587
           L+GH+TMQH SYFKMQRRRR+RK S G+HS+ SL++ + R GSL SFLG           
Sbjct: 15  LIGHLTMQHGSYFKMQRRRRVRKVSPGSHSLLSLLRKDLRDGSLQSFLGGSSYVSNPPAA 74

Query: 586 XPDPLLSSFILTMPVADSSKDVLAESLDESSATYKSSDDNLVESVELSMSDQNQQE 419
            PDP LSS I ++PVA+ SKD  ++S D++    K  D+ +VE  E S+S+++Q+E
Sbjct: 75  APDPFLSSLICSLPVAEPSKDFRSDSSDKTFLLNKFPDEKIVERAETSLSEKDQKE 130


>gb|EEC79055.1| hypothetical protein OsI_19619 [Oryza sativa Indica Group]
          Length = 261

 Score =  111 bits (277), Expect = 2e-22
 Identities = 57/116 (49%), Positives = 78/116 (67%)
 Frame = -1

Query: 766 LVGHITMQHASYFKMQRRRRLRKGSTGTHSIPSLMKSEYRQGSLHSFLGXXXXXXXXXXX 587
           L+GH+TMQH SYFKMQRRRR+RK S+G+HS+ SL++ + R GSL SFLG           
Sbjct: 124 LIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSYVSNPPAA 183

Query: 586 XPDPLLSSFILTMPVADSSKDVLAESLDESSATYKSSDDNLVESVELSMSDQNQQE 419
            PDP LSS I ++PVA+ SKD+ ++S D +    K  DD   E  E S+S+++Q+E
Sbjct: 184 APDPFLSSLICSLPVAEPSKDLHSDSSDNNFLLNKFPDDKTAERAEPSLSEKDQKE 239


>gb|ACG28358.1| fiber protein Fb2 [Zea mays] gi|413945047|gb|AFW77696.1| fiber
           protein Fb2 [Zea mays]
          Length = 140

 Score =  111 bits (277), Expect = 2e-22
 Identities = 57/116 (49%), Positives = 79/116 (68%)
 Frame = -1

Query: 766 LVGHITMQHASYFKMQRRRRLRKGSTGTHSIPSLMKSEYRQGSLHSFLGXXXXXXXXXXX 587
           L+GH+TMQH SYFKMQRRRR+RK S+G+HS+ SL++ + R GSL SFLG           
Sbjct: 3   LIGHLTMQHGSYFKMQRRRRVRKVSSGSHSLLSLLRKDLRNGSLQSFLGGSSYVSNPPAA 62

Query: 586 XPDPLLSSFILTMPVADSSKDVLAESLDESSATYKSSDDNLVESVELSMSDQNQQE 419
            PDP +SS I T+PVA+ SKD+ ++S D +    K  D+  VE  E S+S+++Q+E
Sbjct: 63  APDPFVSSLICTLPVAEPSKDLHSDSSDNNFLLNKFPDEKPVERAEPSLSEKDQKE 118


>ref|NP_001148883.1| fiber protein Fb2 [Zea mays] gi|194695958|gb|ACF82063.1| unknown
           [Zea mays] gi|195622908|gb|ACG33284.1| fiber protein Fb2
           [Zea mays] gi|413945045|gb|AFW77694.1| fiber protein Fb2
           [Zea mays]
          Length = 233

 Score =  111 bits (277), Expect = 2e-22
 Identities = 57/116 (49%), Positives = 79/116 (68%)
 Frame = -1

Query: 766 LVGHITMQHASYFKMQRRRRLRKGSTGTHSIPSLMKSEYRQGSLHSFLGXXXXXXXXXXX 587
           L+GH+TMQH SYFKMQRRRR+RK S+G+HS+ SL++ + R GSL SFLG           
Sbjct: 96  LIGHLTMQHGSYFKMQRRRRVRKVSSGSHSLLSLLRKDLRNGSLQSFLGGSSYVSNPPAA 155

Query: 586 XPDPLLSSFILTMPVADSSKDVLAESLDESSATYKSSDDNLVESVELSMSDQNQQE 419
            PDP +SS I T+PVA+ SKD+ ++S D +    K  D+  VE  E S+S+++Q+E
Sbjct: 156 APDPFVSSLICTLPVAEPSKDLHSDSSDNNFLLNKFPDEKPVERAEPSLSEKDQKE 211


Top