BLASTX nr result

ID: Dioscorea21_contig00007943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007943
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134221.1| PREDICTED: dynein light chain 1, cytoplasmic...   158   7e-37
ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|1...   158   7e-37
ref|XP_003546364.1| PREDICTED: dynein light chain 2, cytoplasmic...   155   8e-36
ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic...   155   8e-36
ref|NP_001238570.1| uncharacterized protein LOC100305908 [Glycin...   154   2e-35

>ref|XP_004134221.1| PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis sativus]
           gi|449515341|ref|XP_004164708.1| PREDICTED: dynein light
           chain 1, cytoplasmic-like [Cucumis sativus]
          Length = 120

 Score =  158 bits (400), Expect = 7e-37
 Identities = 75/105 (71%), Positives = 86/105 (81%)
 Frame = -2

Query: 646 EMADEARKGGPGAGQATAARKVTVKSADMKEEMQKEAIDCAIEAFEKQGVEKDVAERIKK 467
           E  D+ +   P    A  ++K+ +KSADM  +MQKEAID AI AFEK  VEKD+AE+IKK
Sbjct: 20  ESTDDRKPSSP----APLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKK 75

Query: 466 EFDKNYGPTWHCIVGRNFGSYVTHETNHFIYFYLDQKAILLFKSG 332
           EFDKN+GPTWHCIVGRNFGSYVTHETNHF+YFYLDQKAILLFKSG
Sbjct: 76  EFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 120


>ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|118482080|gb|ABK92971.1|
           unknown [Populus trichocarpa]
           gi|222838609|gb|EEE76974.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  158 bits (400), Expect = 7e-37
 Identities = 73/99 (73%), Positives = 84/99 (84%)
 Frame = -2

Query: 628 RKGGPGAGQATAARKVTVKSADMKEEMQKEAIDCAIEAFEKQGVEKDVAERIKKEFDKNY 449
           RK  P A  A   +K+ +K+ADMK++MQKEA+D AI AFE+  VEKDVAE IKKEFDK +
Sbjct: 23  RKSSPAAA-APPGKKIIIKNADMKDDMQKEAVDIAIAAFERNNVEKDVAEHIKKEFDKKH 81

Query: 448 GPTWHCIVGRNFGSYVTHETNHFIYFYLDQKAILLFKSG 332
           GPTWHCIVGRNFGSYVTHETNHF+YFYLDQKA+LLFKSG
Sbjct: 82  GPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 120


>ref|XP_003546364.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max]
          Length = 122

 Score =  155 bits (391), Expect = 8e-36
 Identities = 71/95 (74%), Positives = 80/95 (84%)
 Frame = -2

Query: 616 PGAGQATAARKVTVKSADMKEEMQKEAIDCAIEAFEKQGVEKDVAERIKKEFDKNYGPTW 437
           P    A   +KV +KSADM  +MQKEA+D A+ AFEK  VEKDVAE+IKKEFDK +GPTW
Sbjct: 28  PSPAPAVPPKKVIIKSADMIPDMQKEAVDIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTW 87

Query: 436 HCIVGRNFGSYVTHETNHFIYFYLDQKAILLFKSG 332
           HCIVGRNFGSYVTHETNHF+YFYLDQKA+LLFKSG
Sbjct: 88  HCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 122


>ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max]
          Length = 157

 Score =  155 bits (391), Expect = 8e-36
 Identities = 71/95 (74%), Positives = 80/95 (84%)
 Frame = -2

Query: 616 PGAGQATAARKVTVKSADMKEEMQKEAIDCAIEAFEKQGVEKDVAERIKKEFDKNYGPTW 437
           P    A   +KV +KSADM  +MQKEA+D A+ AFEK  VEKDVAE+IKKEFDK +GPTW
Sbjct: 63  PSPAPAVPPKKVIIKSADMIPDMQKEAVDIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTW 122

Query: 436 HCIVGRNFGSYVTHETNHFIYFYLDQKAILLFKSG 332
           HCIVGRNFGSYVTHETNHF+YFYLDQKA+LLFKSG
Sbjct: 123 HCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 157


>ref|NP_001238570.1| uncharacterized protein LOC100305908 [Glycine max]
           gi|255626947|gb|ACU13818.1| unknown [Glycine max]
          Length = 118

 Score =  154 bits (388), Expect = 2e-35
 Identities = 71/95 (74%), Positives = 80/95 (84%)
 Frame = -2

Query: 616 PGAGQATAARKVTVKSADMKEEMQKEAIDCAIEAFEKQGVEKDVAERIKKEFDKNYGPTW 437
           P    A   +KV +KSADM  +MQKEA+D A+ AFEK  VEKDVAE+IKKEFDK +GPTW
Sbjct: 24  PAPVPAVPPKKVIIKSADMIPDMQKEAVDIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTW 83

Query: 436 HCIVGRNFGSYVTHETNHFIYFYLDQKAILLFKSG 332
           HCIVGRNFGSYVTHETNHF+YFYLDQKA+LLFKSG
Sbjct: 84  HCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118


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