BLASTX nr result

ID: Dioscorea21_contig00007910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007910
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL53116.1| unknown [Zea mays] gi|224034505|gb|ACN36328.1| un...    91   1e-16
ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea ma...    91   1e-16
dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgar...    90   2e-16
ref|XP_002456275.1| hypothetical protein SORBIDRAFT_03g033330 [S...    90   2e-16
gb|EEE55319.1| hypothetical protein OsJ_03316 [Oryza sativa Japo...    89   4e-16

>gb|ACL53116.1| unknown [Zea mays] gi|224034505|gb|ACN36328.1| unknown [Zea mays]
           gi|414880673|tpg|DAA57804.1| TPA: putative regulator of
           chromosome condensation (RCC1) family protein isoform 1
           [Zea mays] gi|414880674|tpg|DAA57805.1| TPA: putative
           regulator of chromosome condensation (RCC1) family
           protein isoform 2 [Zea mays]
          Length = 416

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
 Frame = +1

Query: 4   DGHKLWAWGRGRSGVLGHGKTTDSFMPFPVLWPPPDEDFKENNMDAQDEKTK--PSNQEA 177
           DG+++WAWGRGRSGVLG G+T DS++P  V+WPP DE+F E+ M     +     S +  
Sbjct: 248 DGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDENFHEDQMGGSTSRVNDHTSTELE 307

Query: 178 GKLANTSEEIEFLRSKLTL 234
            KL+  SEE++FLRSKLTL
Sbjct: 308 QKLSAASEELQFLRSKLTL 326


>ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea mays]
           gi|194690372|gb|ACF79270.1| unknown [Zea mays]
           gi|219884485|gb|ACL52617.1| unknown [Zea mays]
           gi|219885259|gb|ACL53004.1| unknown [Zea mays]
           gi|219885461|gb|ACL53105.1| unknown [Zea mays]
           gi|238010394|gb|ACR36232.1| unknown [Zea mays]
           gi|414880676|tpg|DAA57807.1| TPA: putative regulator of
           chromosome condensation (RCC1) family protein [Zea mays]
          Length = 556

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
 Frame = +1

Query: 4   DGHKLWAWGRGRSGVLGHGKTTDSFMPFPVLWPPPDEDFKENNMDAQDEKTK--PSNQEA 177
           DG+++WAWGRGRSGVLG G+T DS++P  V+WPP DE+F E+ M     +     S +  
Sbjct: 388 DGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDENFHEDQMGGSTSRVNDHTSTELE 447

Query: 178 GKLANTSEEIEFLRSKLTL 234
            KL+  SEE++FLRSKLTL
Sbjct: 448 QKLSAASEELQFLRSKLTL 466


>dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326532960|dbj|BAJ89325.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 566

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
 Frame = +1

Query: 4   DGHKLWAWGRGRSGVLGHGKTTDSFMPFPVLWPPPDEDFKENNMDAQDEKTKPSNQEAG- 180
           DG+++WAWGRGRSGVLG  +TTDS+ P  V+WPP DE+F+E + D     T  +N     
Sbjct: 391 DGYRMWAWGRGRSGVLGRDQTTDSYTPCVVMWPPLDENFQEIHGDQAQASTSRANDRTNT 450

Query: 181 ----KLANTSEEIEFLRSKLTL 234
               KL+  SEE++FLRSKLTL
Sbjct: 451 ELELKLSAASEELQFLRSKLTL 472


>ref|XP_002456275.1| hypothetical protein SORBIDRAFT_03g033330 [Sorghum bicolor]
           gi|241928250|gb|EES01395.1| hypothetical protein
           SORBIDRAFT_03g033330 [Sorghum bicolor]
          Length = 560

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
 Frame = +1

Query: 4   DGHKLWAWGRGRSGVLGHGKTTDSFMPFPVLWPPPDEDFKENNMDAQDEKT-----KPSN 168
           DG+++WAWGRGRSGVLG G+T DS++P  V+WPP DE+F+E + D     T     + S 
Sbjct: 388 DGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDENFQEIHEDQAGGSTSRVNDRTST 447

Query: 169 QEAGKLANTSEEIEFLRSKLTL 234
           +   KL+  SEE++FLRSKLTL
Sbjct: 448 ELTQKLSAASEELQFLRSKLTL 469


>gb|EEE55319.1| hypothetical protein OsJ_03316 [Oryza sativa Japonica Group]
          Length = 547

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
 Frame = +1

Query: 4   DGHKLWAWGRGRSGVLGHGKTTDSFMPFPVLWPPPDEDFKENNMDAQDEKTKPSNQEAG- 180
           DG+++WAWGRGRSGVLG  +T DS++P  V+WPP DE+F+E + D     T   N     
Sbjct: 375 DGYRMWAWGRGRSGVLGRNQTADSYIPCVVMWPPLDENFQEIHEDRAQASTSGVNDRNSA 434

Query: 181 ----KLANTSEEIEFLRSKLTL 234
               KL+  SEE+EFLRSKLTL
Sbjct: 435 ELEQKLSAASEELEFLRSKLTL 456


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