BLASTX nr result

ID: Dioscorea21_contig00007897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007897
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV56697.1| 60S ribosomal protein [Phaseolus vulgaris]             271   6e-72
gb|ABK26742.1| unknown [Picea sitchensis]                             274   2e-71
gb|ABK24210.1| unknown [Picea sitchensis]                             274   2e-71
gb|ABK23926.1| unknown [Picea sitchensis]                             274   2e-71
gb|ABK23693.1| unknown [Picea sitchensis]                             274   2e-71

>gb|ADV56697.1| 60S ribosomal protein [Phaseolus vulgaris]
          Length = 180

 Score =  271 bits (694), Expect(2) = 6e-72
 Identities = 138/159 (86%), Positives = 141/159 (88%)
 Frame = +1

Query: 55  MVSLKLQKRLAASVLKCGKGKVWLDPNESSEISMANSRQYIRKLVKDGFVIRKPTKIHSR 234
           MVSLKLQKRLAASVLKCG+GKVWLDPNE +EISMANSRQ IRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 235 SRARRALEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 414
           SRARR  EAKRKGRHSGYGKRKGTREARLPTKI              KYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 415 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF 531
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF 159



 Score = 26.6 bits (57), Expect(2) = 6e-72
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 548 RARLAGKGRLPGGRSA 595
           + RLAGKG+L GGR+A
Sbjct: 165 KTRLAGKGKLLGGRNA 180


>gb|ABK26742.1| unknown [Picea sitchensis]
          Length = 203

 Score =  274 bits (701), Expect = 2e-71
 Identities = 141/159 (88%), Positives = 142/159 (89%)
 Frame = +1

Query: 55  MVSLKLQKRLAASVLKCGKGKVWLDPNESSEISMANSRQYIRKLVKDGFVIRKPTKIHSR 234
           MVSLKLQKRLAASVLKCGKGKVWLDPNE SEISMANSRQ IRKLVKDGFVIRKP KIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFVIRKPMKIHSR 60

Query: 235 SRARRALEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 414
           +RARRALEAKRKGRHSGYGKRKGTREARLPTKI              KYRESKKIDKHMY
Sbjct: 61  ARARRALEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 415 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF 531
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF 159


>gb|ABK24210.1| unknown [Picea sitchensis]
          Length = 203

 Score =  274 bits (701), Expect = 2e-71
 Identities = 141/159 (88%), Positives = 142/159 (89%)
 Frame = +1

Query: 55  MVSLKLQKRLAASVLKCGKGKVWLDPNESSEISMANSRQYIRKLVKDGFVIRKPTKIHSR 234
           MVSLKLQKRLAASVLKCGKGKVWLDPNE SEISMANSRQ IRKLVKDGFVIRKP KIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFVIRKPMKIHSR 60

Query: 235 SRARRALEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 414
           +RARRALEAKRKGRHSGYGKRKGTREARLPTKI              KYRESKKIDKHMY
Sbjct: 61  ARARRALEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 415 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF 531
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF 159


>gb|ABK23926.1| unknown [Picea sitchensis]
          Length = 177

 Score =  274 bits (701), Expect = 2e-71
 Identities = 141/159 (88%), Positives = 142/159 (89%)
 Frame = +1

Query: 55  MVSLKLQKRLAASVLKCGKGKVWLDPNESSEISMANSRQYIRKLVKDGFVIRKPTKIHSR 234
           MVSLKLQKRLAASVLKCGKGKVWLDPNE SEISMANSRQ IRKLVKDGFVIRKP KIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFVIRKPMKIHSR 60

Query: 235 SRARRALEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 414
           +RARRALEAKRKGRHSGYGKRKGTREARLPTKI              KYRESKKIDKHMY
Sbjct: 61  ARARRALEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 415 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF 531
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF 159


>gb|ABK23693.1| unknown [Picea sitchensis]
          Length = 203

 Score =  274 bits (701), Expect = 2e-71
 Identities = 141/159 (88%), Positives = 142/159 (89%)
 Frame = +1

Query: 55  MVSLKLQKRLAASVLKCGKGKVWLDPNESSEISMANSRQYIRKLVKDGFVIRKPTKIHSR 234
           MVSLKLQKRLAASVLKCGKGKVWLDPNE SEISMANSRQ IRKLVKDGFVIRKP KIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFVIRKPMKIHSR 60

Query: 235 SRARRALEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 414
           +RARRALEAKRKGRHSGYGKRKGTREARLPTKI              KYRESKKIDKHMY
Sbjct: 61  ARARRALEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 415 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF 531
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQF 159


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