BLASTX nr result

ID: Dioscorea21_contig00007877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007877
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882868.1| hypothetical protein ARALYDRAFT_478823 [Arab...   101   6e-20
ref|XP_002331184.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002304117.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communi...    99   5e-19
gb|AAM65229.1| oligouridylate binding protein, putative [Arabido...    98   6e-19

>ref|XP_002882868.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
           lyrata] gi|297328708|gb|EFH59127.1| hypothetical protein
           ARALYDRAFT_478823 [Arabidopsis lyrata subsp. lyrata]
          Length = 430

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/82 (64%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
 Frame = +2

Query: 2   KPTPPGTASNPLPAPVPSPT------DLLAYERTLALSKMASTQALMHPHNQHALKQAMM 163
           KPTPPGTASNPLP P P+P       DLLAYER LALSKMAS  ALMHP  QH L+Q   
Sbjct: 342 KPTPPGTASNPLPPPAPAPVPGLSAADLLAYERQLALSKMASVNALMHPQGQHPLRQGAH 401

Query: 164 GI-GGGSQAAIYDAGFPNIAAA 226
           GI   G+ AA+YD GF N+AAA
Sbjct: 402 GINAAGATAAMYDGGFQNVAAA 423


>ref|XP_002331184.1| predicted protein [Populus trichocarpa] gi|222873305|gb|EEF10436.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/82 (62%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
 Frame = +2

Query: 2   KPTPPGTASNPLPAPVPSP------TDLLAYERTLALSKMASTQALMHPHNQHALKQAMM 163
           KPTPPGT+SNPLP P  +P      TD+LAYER LA+SKM    ALMHP  QH LKQA M
Sbjct: 338 KPTPPGTSSNPLPPPAAAPLPGLTATDILAYERQLAISKMGGIHALMHPQGQHPLKQATM 397

Query: 164 GIG-GGSQAAIYDAGFPNIAAA 226
           G+G  G+  AIYD GF N+AAA
Sbjct: 398 GMGAAGASQAIYDGGFQNVAAA 419


>ref|XP_002304117.1| predicted protein [Populus trichocarpa] gi|222841549|gb|EEE79096.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/81 (61%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
 Frame = +2

Query: 2   KPTPPGTASNPLPAPVPSP------TDLLAYERTLALSKMASTQALMHPHNQHALKQAMM 163
           KPTPPGT+SNPLP P  +P      TD+LAYER LALSKM    A M PH Q  LKQA M
Sbjct: 334 KPTPPGTSSNPLPPPAAAPLPGISATDILAYERQLALSKMGGVHAFMPPHGQLPLKQAAM 393

Query: 164 GIGGGSQAAIYDAGFPNIAAA 226
           G+G G+  AIYD GF N+AAA
Sbjct: 394 GMGAGASQAIYDGGFQNVAAA 414


>ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communis]
           gi|223531377|gb|EEF33213.1| nucleolysin tia-1, putative
           [Ricinus communis]
          Length = 422

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/82 (60%), Positives = 56/82 (68%), Gaps = 7/82 (8%)
 Frame = +2

Query: 2   KPTPPGTASNPLPAPVPSP------TDLLAYERTLALSKMASTQALMHPHNQHALKQAMM 163
           KPTPPGT+SNPLP P  +P      TDLL YER LA+ KM    ALMHP  QH LKQA M
Sbjct: 334 KPTPPGTSSNPLPPPAAAPLPGLSATDLLTYERQLAMGKMGGVHALMHPQGQHPLKQAAM 393

Query: 164 GIG-GGSQAAIYDAGFPNIAAA 226
           G+G  G+  AIYD GF N+AAA
Sbjct: 394 GMGAAGASQAIYDGGFQNVAAA 415


>gb|AAM65229.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
          Length = 427

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/81 (62%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
 Frame = +2

Query: 2   KPTPPGTASNPLPAPVPSPT------DLLAYERTLALSKMASTQALMHPHNQHALKQAMM 163
           KPTPPGTASNPLP P P+P       DLL YER LALSKMAS  ALMHP  QH L+QA  
Sbjct: 340 KPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVNALMHPQGQHPLRQAHG 399

Query: 164 GIGGGSQAAIYDAGFPNIAAA 226
               G+ AA+YD GF N+AAA
Sbjct: 400 INAAGATAAMYDGGFQNVAAA 420


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