BLASTX nr result

ID: Dioscorea21_contig00007873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007873
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] g...   207   1e-51
gb|ACG35575.1| DNA binding protein [Zea mays]                         203   2e-50
gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays] gi|41392...   202   3e-50
gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PB...   202   3e-50
ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825...   201   7e-50

>ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group]
           gi|50251252|dbj|BAD28032.1| putative Chain C, Structure
           Of The Plant Transcriptional Regulator Pbf-2 [Oryza
           sativa Japonica Group] gi|50252182|dbj|BAD28177.1|
           putative Chain C, Structure Of The Plant Transcriptional
           Regulator Pbf-2 [Oryza sativa Japonica Group]
           gi|113535487|dbj|BAF07870.1| Os02g0158400 [Oryza sativa
           Japonica Group] gi|215692593|dbj|BAG88013.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704516|dbj|BAG94149.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740785|dbj|BAG96941.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218190103|gb|EEC72530.1| hypothetical protein
           OsI_05924 [Oryza sativa Indica Group]
           gi|222622212|gb|EEE56344.1| hypothetical protein
           OsJ_05450 [Oryza sativa Japonica Group]
          Length = 228

 Score =  207 bits (526), Expect = 1e-51
 Identities = 103/187 (55%), Positives = 137/187 (73%), Gaps = 5/187 (2%)
 Frame = -2

Query: 548 KFLPM---KIENCMDVLRLGC--FHRHYSTGSTDLTNSGRTFAEFSIFKGKAALSMSPIM 384
           +F+P    ++ +  D L  G   F    ST + D   SGR FA +++FKGKAALSM PI+
Sbjct: 6   RFVPSSSRRVTDLKDALWSGSLTFQHALSTFAADENTSGRKFASYTVFKGKAALSMQPIL 65

Query: 383 PKFTKMDSGISKVDRRGVVLLKFMPAIGTRKYDWEKRQFFALSAIEVGSLISLGPTESCE 204
           P F+K++SG S+V++ G V+L F PA+G RKYD+ K+Q FALS  EVGSLISLGP ESCE
Sbjct: 66  PSFSKLESGGSRVNKNGSVMLTFFPAVGQRKYDYSKKQLFALSPTEVGSLISLGPAESCE 125

Query: 203 FFHDPSMKSSLEGQVKKTLTVSPMGSDGGFFFGLSVLNAAEKKTERFSVPVTKAEYAVIR 24
           FFHDPSMKSS EGQVKK+L+V+P+G+D G+F  ++VLN  +K TER S+P++KAE+ V+R
Sbjct: 126 FFHDPSMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLSLPISKAEFTVMR 185

Query: 23  AACGFVL 3
            A  F L
Sbjct: 186 TALSFAL 192


>gb|ACG35575.1| DNA binding protein [Zea mays]
          Length = 230

 Score =  203 bits (516), Expect = 2e-50
 Identities = 103/189 (54%), Positives = 137/189 (72%), Gaps = 7/189 (3%)
 Frame = -2

Query: 548 KFLPMKIENCMDVLR-LGC----FHRHYSTGSTDLTN--SGRTFAEFSIFKGKAALSMSP 390
           +FLP       D+   L C    F +  ST +T+L    SG+ FA +++FKGKAALS+ P
Sbjct: 6   RFLPSACRRGFDLKESLWCGSLTFQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSIHP 65

Query: 389 IMPKFTKMDSGISKVDRRGVVLLKFMPAIGTRKYDWEKRQFFALSAIEVGSLISLGPTES 210
           I+P F+K++SG S+V + G V+L F PA+G RKYD+ K+Q FALS  EVGSLISLGP ES
Sbjct: 66  ILPSFSKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGPAES 125

Query: 209 CEFFHDPSMKSSLEGQVKKTLTVSPMGSDGGFFFGLSVLNAAEKKTERFSVPVTKAEYAV 30
           CEFFHDPSMKSS EG VKK+L+++P+GSD G+F  ++V+N+AE+  +R SVP+TKAE+AV
Sbjct: 126 CEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPITKAEFAV 185

Query: 29  IRAACGFVL 3
           IR    F L
Sbjct: 186 IRTTLSFAL 194


>gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays]
           gi|413926544|gb|AFW66476.1| DNA binding protein isoform
           2 [Zea mays]
          Length = 274

 Score =  202 bits (514), Expect = 3e-50
 Identities = 97/166 (58%), Positives = 129/166 (77%), Gaps = 2/166 (1%)
 Frame = -2

Query: 494 FHRHYSTGSTDLTN--SGRTFAEFSIFKGKAALSMSPIMPKFTKMDSGISKVDRRGVVLL 321
           F +  ST +T+L    SG+ FA +++FKGKAALS+ PI+P F+K++SG S+V + G V+L
Sbjct: 71  FQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSIHPILPSFSKLESGGSRVSKNGSVML 130

Query: 320 KFMPAIGTRKYDWEKRQFFALSAIEVGSLISLGPTESCEFFHDPSMKSSLEGQVKKTLTV 141
            F PA+G RKYD+ K+Q FALS  EVGSLISLGP ESCEFFHDPSMKSS EG VKK+L++
Sbjct: 131 TFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSNEGTVKKSLSI 190

Query: 140 SPMGSDGGFFFGLSVLNAAEKKTERFSVPVTKAEYAVIRAACGFVL 3
           +P+GSD G+F  ++V+N+AE+  +R SVP+TKAE+AVIR    F L
Sbjct: 191 TPLGSDSGYFVNITVVNSAERTNDRLSVPITKAEFAVIRTTLSFAL 236


>gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PBF-2 like
           transcription factor [Zea mays]
           gi|323388771|gb|ADX60190.1| PBF-2 like transcription
           factor [Zea mays]
          Length = 232

 Score =  202 bits (514), Expect = 3e-50
 Identities = 97/166 (58%), Positives = 129/166 (77%), Gaps = 2/166 (1%)
 Frame = -2

Query: 494 FHRHYSTGSTDLTN--SGRTFAEFSIFKGKAALSMSPIMPKFTKMDSGISKVDRRGVVLL 321
           F +  ST +T+L    SG+ FA +++FKGKAALS+ PI+P F+K++SG S+V + G V+L
Sbjct: 29  FQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSIHPILPSFSKLESGGSRVSKNGSVML 88

Query: 320 KFMPAIGTRKYDWEKRQFFALSAIEVGSLISLGPTESCEFFHDPSMKSSLEGQVKKTLTV 141
            F PA+G RKYD+ K+Q FALS  EVGSLISLGP ESCEFFHDPSMKSS EG VKK+L++
Sbjct: 89  TFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSNEGTVKKSLSI 148

Query: 140 SPMGSDGGFFFGLSVLNAAEKKTERFSVPVTKAEYAVIRAACGFVL 3
           +P+GSD G+F  ++V+N+AE+  +R SVP+TKAE+AVIR    F L
Sbjct: 149 TPLGSDSGYFVNITVVNSAERTNDRLSVPITKAEFAVIRTTLSFAL 194


>ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825843 [Brachypodium
           distachyon]
          Length = 231

 Score =  201 bits (511), Expect = 7e-50
 Identities = 104/189 (55%), Positives = 137/189 (72%), Gaps = 7/189 (3%)
 Frame = -2

Query: 548 KFLPM---KIENCMDVLRLGC--FHRHYSTGSTDLTN--SGRTFAEFSIFKGKAALSMSP 390
           +FLP    K+ +  DVL  G   F    ST + ++    S R FA +++FKGKAALS+SP
Sbjct: 6   RFLPSTSRKVSDLKDVLWSGSVTFEHALSTSAANVDENASARKFASYTVFKGKAALSISP 65

Query: 389 IMPKFTKMDSGISKVDRRGVVLLKFMPAIGTRKYDWEKRQFFALSAIEVGSLISLGPTES 210
           I+P FTK++SG S+V + G V+L F PA+G R+YD+ K+Q FALS  EVGSLISLG  ES
Sbjct: 66  ILPNFTKIESGGSRVKKNGSVMLTFFPAVGQRQYDYSKKQLFALSPTEVGSLISLGSAES 125

Query: 209 CEFFHDPSMKSSLEGQVKKTLTVSPMGSDGGFFFGLSVLNAAEKKTERFSVPVTKAEYAV 30
           CEFFHDPSMKSS EGQVKK+L+++P+G+D G+F  ++VLN  +K  ER SVPVTKAE+AV
Sbjct: 126 CEFFHDPSMKSSHEGQVKKSLSITPLGNDNGYFVNITVLNNVQKTNERLSVPVTKAEFAV 185

Query: 29  IRAACGFVL 3
           +R A  + L
Sbjct: 186 MRTALSYAL 194


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