BLASTX nr result

ID: Dioscorea21_contig00007856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007856
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314796.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002527782.1| Pectinesterase-1 precursor, putative [Ricinu...    94   9e-18
ref|XP_003630897.1| Pectinesterase [Medicago truncatula] gi|3555...    88   8e-16
ref|XP_003630895.1| Pectinesterase [Medicago truncatula] gi|3555...    88   8e-16
ref|XP_003630890.1| Pectinesterase [Medicago truncatula] gi|3555...    88   8e-16

>ref|XP_002314796.1| predicted protein [Populus trichocarpa] gi|222863836|gb|EEF00967.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/122 (40%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
 Frame = +1

Query: 31  MAHLLAFSLFMAFRVCTSDPILSCTQTPYPYVCTSSISNTIKDS---LGFLNSTLQATLD 201
           +  L A+ LF +  +   D + SC QTP+P  C   I   I  +       + +L  T++
Sbjct: 8   LGFLNAYFLFYSLALVHGDSVTSCDQTPFPEACNYFIDTNISKTPPLFALRDQSLSITMN 67

Query: 202 HAVQTHKLASSTDVSLFDERAKAAWNDCLELCEDTISHLNKCMSPNSVSFDDSQTWLSAA 381
            A++ H++ SS ++S F+++AK AW+DCL+L EDT+ H+N+ MS N+++  DSQTWLSAA
Sbjct: 68  KAIEAHQMVSSMELSSFNQQAKLAWDDCLKLYEDTVDHVNRSMSSNNLA--DSQTWLSAA 125

Query: 382 IA 387
           IA
Sbjct: 126 IA 127


>ref|XP_002527782.1| Pectinesterase-1 precursor, putative [Ricinus communis]
           gi|223532817|gb|EEF34592.1| Pectinesterase-1 precursor,
           putative [Ricinus communis]
          Length = 529

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 7/130 (5%)
 Frame = +1

Query: 19  MAKFMAHLLAFSLFMAFRVCTSDPILSCTQTPYPYVCTSSISNTIKDS-------LGFLN 177
           +A F  H L +SL +   +  S  I SC +TPYP VC   I   +  +         F +
Sbjct: 6   LAIFYVHFLFYSLEL---IHGSKLITSCARTPYPEVCNYFIETNLLQTQYQTGTTFSFRD 62

Query: 178 STLQATLDHAVQTHKLASSTDVSLFDERAKAAWNDCLELCEDTISHLNKCMSPNSVSFDD 357
            +L  T++ A++ H++ SS +   FD++AK AW+DC+EL EDT+ HLN+ +S  S    D
Sbjct: 63  QSLLVTMNQAIKAHQMVSSMNFKSFDKKAKLAWDDCMELYEDTVDHLNRSLS--STIPID 120

Query: 358 SQTWLSAAIA 387
           SQTWLSAAIA
Sbjct: 121 SQTWLSAAIA 130


>ref|XP_003630897.1| Pectinesterase [Medicago truncatula] gi|355524919|gb|AET05373.1|
           Pectinesterase [Medicago truncatula]
          Length = 206

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 7/125 (5%)
 Frame = +1

Query: 31  MAHLLAFSLFMAFRVCTSDPILSCTQTPYPYVC------TSSISNTIKDSLGFLNSTLQA 192
           +A+ L FSL            LSC QTPYP+VC      T++  +T+  S  F +  L+ 
Sbjct: 10  IAYFLLFSLLFVH-----GKELSCNQTPYPHVCNHYIGTTTNKLSTLDSSSSFHDIVLKV 64

Query: 193 TLDHAVQTHKLASSTDVSLF-DERAKAAWNDCLELCEDTISHLNKCMSPNSVSFDDSQTW 369
           TLD A++ HKL S+ +++ F D+ AK+AW DCLEL EDTI  L +  S NS + +D  TW
Sbjct: 65  TLDQAIEAHKLVSTMELNNFKDKHAKSAWEDCLELYEDTIYQLKR--SINSNNLNDKLTW 122

Query: 370 LSAAI 384
            SA+I
Sbjct: 123 QSASI 127


>ref|XP_003630895.1| Pectinesterase [Medicago truncatula] gi|355524917|gb|AET05371.1|
           Pectinesterase [Medicago truncatula]
          Length = 379

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 7/125 (5%)
 Frame = +1

Query: 31  MAHLLAFSLFMAFRVCTSDPILSCTQTPYPYVC------TSSISNTIKDSLGFLNSTLQA 192
           +A+ L FSL            LSC QTPYP+VC      T++  +T+  S  F +  L+ 
Sbjct: 10  IAYFLLFSLLFVH-----GKELSCNQTPYPHVCNHYIGTTTNKLSTLDSSSSFHDIVLKV 64

Query: 193 TLDHAVQTHKLASSTDVSLF-DERAKAAWNDCLELCEDTISHLNKCMSPNSVSFDDSQTW 369
           TLD A++ HKL S+ +++ F D+ AK+AW DCLEL EDTI  L +  S NS + +D  TW
Sbjct: 65  TLDQAIEAHKLVSTMELNNFKDKHAKSAWEDCLELYEDTIYQLKR--SINSNNLNDKLTW 122

Query: 370 LSAAI 384
            SA+I
Sbjct: 123 QSASI 127


>ref|XP_003630890.1| Pectinesterase [Medicago truncatula] gi|355524912|gb|AET05366.1|
           Pectinesterase [Medicago truncatula]
          Length = 500

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 7/125 (5%)
 Frame = +1

Query: 31  MAHLLAFSLFMAFRVCTSDPILSCTQTPYPYVC------TSSISNTIKDSLGFLNSTLQA 192
           +A+ L FSL            LSC QTPYP+VC      T++  +T+  S  F +  L+ 
Sbjct: 10  IAYFLLFSLLFVH-----GKELSCNQTPYPHVCNHYIGTTTNKLSTLDSSSSFHDIALKV 64

Query: 193 TLDHAVQTHKLASSTDVSLF-DERAKAAWNDCLELCEDTISHLNKCMSPNSVSFDDSQTW 369
           TLD A++ HKL S+ +++ F D+ AK+AW DCLEL EDTI  L +  S NS + +D  TW
Sbjct: 65  TLDQAIEAHKLVSTMELNNFKDKHAKSAWEDCLELYEDTIYQLKR--SINSNNLNDKLTW 122

Query: 370 LSAAI 384
            SA+I
Sbjct: 123 QSASI 127


Top